RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 HELZ2Q9BYK8 2649 aaKnown RBP10.79□□□□□ -0.68
RANBP3-209ENST00000587411 Q6ZRP5 223 aa10.79□□□□□ -0.68
RANBP3-209ENST00000587411 FAM229BQ4G0N7 80 aa10.79□□□□□ -0.68
RANBP3-209ENST00000587411 HIGD2AQ9BW72 106 aa10.79□□□□□ -0.68
RANBP3-209ENST00000587411 H3BNG1 76 aa10.78□□□□□ -0.68
RANBP3-209ENST00000587411 NKAPP1Q8N9T2 125 aa10.78□□□□□ -0.68
RANBP3-209ENST00000587411 DEFB105AQ8NG35 78 aa10.77□□□□□ -0.69
RANBP3-209ENST00000587411 DHRS4-AS1Q9P1J3 65 aa10.76□□□□□ -0.69
RANBP3-209ENST00000587411 LCE6AA0A183 80 aa10.76□□□□□ -0.69
RANBP3-209ENST00000587411 BRK1Q8WUW1 75 aa10.76□□□□□ -0.69
RANBP3-209ENST00000587411 ANK3Q12955 4377 aaKnown RBP10.76□□□□□ -0.69
RANBP3-209ENST00000587411 SMIM29Q86T20 159 aa10.75□□□□□ -0.69
RANBP3-209ENST00000587411 MPLKIPQ8TAP9 179 aa10.75□□□□□ -0.69
RANBP3-209ENST00000587411 SYCNQ0VAF6 134 aa10.74□□□□□ -0.69
RANBP3-209ENST00000587411 ACANP16112 2415 aa10.74□□□□□ -0.69
RANBP3-209ENST00000587411 C7orf33Q8WU49 177 aa10.74□□□□□ -0.69
RANBP3-209ENST00000587411 J3QKU1 62 aa10.73□□□□□ -0.69
RANBP3-209ENST00000587411 ITPR2Q14571 2701 aa10.72□□□□□ -0.69
RANBP3-209ENST00000587411 A0A1W2PNM2 257 aa10.72□□□□□ -0.69
RANBP3-209ENST00000587411 FAM30AQ9NZY2 134 aa10.72□□□□□ -0.69
RANBP3-209ENST00000587411 Q6ZRX8 168 aa10.71□□□□□ -0.69
RANBP3-209ENST00000587411 PKIGQ9Y2B9 76 aa10.71□□□□□ -0.69
RANBP3-209ENST00000587411 KMT2BQ9UMN6 2715 aaPredicted RBP10.71□□□□□ -0.7
RANBP3-209ENST00000587411 TNP2Q05952 138 aa10.71□□□□□ -0.7
RANBP3-209ENST00000587411 SERTAD4-AS1Q5TG53 156 aa10.71□□□□□ -0.7
RANBP3-209ENST00000587411 Q8NBF4 154 aa10.71□□□□□ -0.7
RANBP3-209ENST00000587411 C1orf137Q5JT78 98 aa10.7□□□□□ -0.7
RANBP3-209ENST00000587411 PLA2G2DQ9UNK4 145 aa10.7□□□□□ -0.7
RANBP3-209ENST00000587411 MTORP42345 2549 aa10.69□□□□□ -0.7
RANBP3-209ENST00000587411 hDV103S1A0JD37 113 aa10.68□□□□□ -0.7
RANBP3-209ENST00000587411 SPRR4Q96PI1 79 aa10.68□□□□□ -0.7
RANBP3-209ENST00000587411 IGKV2D-24A0A075B6R9 120 aa10.68□□□□□ -0.7
RANBP3-209ENST00000587411 ETDCA0A1B0GVM5 59 aa10.67□□□□□ -0.7
RANBP3-209ENST00000587411 KRTAP4-16G5E9R7 235 aaPredicted RBP10.67□□□□□ -0.7
RANBP3-209ENST00000587411 TLX1NBP0CAT3 122 aa10.67□□□□□ -0.7
RANBP3-209ENST00000587411 LINC01556Q5JQF7 62 aa10.67□□□□□ -0.7
RANBP3-209ENST00000587411 NOTCH2Q04721 2471 aa10.66□□□□□ -0.7
RANBP3-209ENST00000587411 ZCCHC13Q8WW36 166 aaKnown RBP10.66□□□□□ -0.7
RANBP3-209ENST00000587411 Q9BRP9 147 aa10.66□□□□□ -0.7
RANBP3-209ENST00000587411 HECTD1Q9ULT8 2610 aa10.66□□□□□ -0.7
RANBP3-209ENST00000587411 IGLV5-37A0A075B6J1 123 aa10.65□□□□□ -0.7
RANBP3-209ENST00000587411 SPRR1AP35321 89 aa10.65□□□□□ -0.7
RANBP3-209ENST00000587411 FASNP49327 2511 aaKnown RBP10.65□□□□□ -0.7
RANBP3-209ENST00000587411 HIVEP2P31629 2446 aa10.65□□□□□ -0.7
RANBP3-209ENST00000587411 UNC79Q9P2D8 2635 aa10.65□□□□□ -0.71
RANBP3-209ENST00000587411 DSCR10P59022 87 aa10.64□□□□□ -0.71
RANBP3-209ENST00000587411 PDZD2O15018 2839 aa10.64□□□□□ -0.71
RANBP3-209ENST00000587411 IGLV1-50A0A075B6I6 118 aa10.63□□□□□ -0.71
RANBP3-209ENST00000587411 SMR3AQ99954 134 aa10.62□□□□□ -0.71
RANBP3-209ENST00000587411 C1orf195Q5TG92 126 aa10.61□□□□□ -0.71
RANBP3-209ENST00000587411 RPL37AP8A6NKH3 93 aa10.61□□□□□ -0.71
RANBP3-209ENST00000587411 Q1T7F1 81 aa10.61□□□□□ -0.71
RANBP3-209ENST00000587411 ST20-AS1Q8NBB2 130 aa10.61□□□□□ -0.71
RANBP3-209ENST00000587411 C1orf64Q8NEQ6 169 aa10.61□□□□□ -0.71
RANBP3-209ENST00000587411 K7EQZ3 153 aa10.6□□□□□ -0.71
RANBP3-209ENST00000587411 HCG22E2RYF7 251 aa10.58□□□□□ -0.72
RANBP3-209ENST00000587411 CYP4F30PQ9H0H9 118 aa10.58□□□□□ -0.72
RANBP3-209ENST00000587411 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.58□□□□□ -0.72
RANBP3-209ENST00000587411 VWFP04275 2813 aa10.56□□□□□ -0.72
RANBP3-209ENST00000587411 FAM168BA1KXE4 195 aa10.55□□□□□ -0.72
RANBP3-209ENST00000587411 NDUFB1O75438 58 aa10.55□□□□□ -0.72
RANBP3-209ENST00000587411 RETNQ9HD89 108 aa10.55□□□□□ -0.72
RANBP3-209ENST00000587411 DNAH10OSP0CZ25 163 aa10.54□□□□□ -0.72
RANBP3-209ENST00000587411 UBE2BP63146 152 aa10.53□□□□□ -0.72
RANBP3-209ENST00000587411 MRPL55Q7Z7F7 128 aaKnown RBP10.53□□□□□ -0.72
RANBP3-209ENST00000587411 PRR15Q8IV56 129 aa10.53□□□□□ -0.72
RANBP3-209ENST00000587411 PSCAO43653 123 aa10.52□□□□□ -0.73
RANBP3-209ENST00000587411 LINC00476Q8WZB0 136 aa10.52□□□□□ -0.73
RANBP3-209ENST00000587411 V9GYY9 64 aa10.51□□□□□ -0.73
RANBP3-209ENST00000587411 LRCOL1A6NCL2 159 aa10.51□□□□□ -0.73
RANBP3-209ENST00000587411 KRTAP7-1Q8IUC3 87 aa10.51□□□□□ -0.73
RANBP3-209ENST00000587411 DEFB131BA0A096LNP1 70 aa10.51□□□□□ -0.73
RANBP3-209ENST00000587411 MP68P56378 58 aa10.49□□□□□ -0.73
RANBP3-209ENST00000587411 REG3GQ6UW15 175 aa10.49□□□□□ -0.73
RANBP3-209ENST00000587411 HIVEP1P15822 2718 aa10.48□□□□□ -0.73
RANBP3-209ENST00000587411 IGFL1Q6UW32 110 aa10.46□□□□□ -0.73
RANBP3-209ENST00000587411 TRAV22A0A0B4J277 110 aa10.46□□□□□ -0.74
RANBP3-209ENST00000587411 INAFM1C9JVW0 142 aa10.46□□□□□ -0.74
RANBP3-209ENST00000587411 C11orf45Q8TAV5 145 aa10.45□□□□□ -0.74
RANBP3-209ENST00000587411 IGLV8-61A0A075B6I0 122 aa10.44□□□□□ -0.74
RANBP3-209ENST00000587411 SEC61GP60059 68 aa10.44□□□□□ -0.74
RANBP3-209ENST00000587411 PRR4Q16378 134 aa10.43□□□□□ -0.74
RANBP3-209ENST00000587411 WFDC13Q8IUB5 93 aa10.42□□□□□ -0.74
RANBP3-209ENST00000587411 PSPHP1O15172 72 aa10.42□□□□□ -0.74
RANBP3-209ENST00000587411 CASC10Q5T4H9 136 aa10.42□□□□□ -0.74
RANBP3-209ENST00000587411 H3BPC8 53 aa10.41□□□□□ -0.74
RANBP3-209ENST00000587411 A0A087WSZ3 146 aa10.41□□□□□ -0.74
RANBP3-209ENST00000587411 SPANXA2-OT1Q8N9U9 137 aa10.41□□□□□ -0.74
RANBP3-209ENST00000587411 B9D2Q9BPU9 175 aa10.41□□□□□ -0.74
RANBP3-209ENST00000587411 KRTAP10-11P60412 298 aa10.4□□□□□ -0.74
RANBP3-209ENST00000587411 KRTAP29-1A8MX34 341 aaPredicted RBP10.4□□□□□ -0.75
RANBP3-209ENST00000587411 OTOGQ6ZRI0 2925 aa10.39□□□□□ -0.75
RANBP3-209ENST00000587411 DEFB116Q30KQ4 102 aa10.39□□□□□ -0.75
RANBP3-209ENST00000587411 LINC00208Q96KT6 92 aa10.39□□□□□ -0.75
RANBP3-209ENST00000587411 A0A0G2JQZ4 141 aa10.38□□□□□ -0.75
RANBP3-209ENST00000587411 A0A1W2PNN7 141 aa10.38□□□□□ -0.75
RANBP3-209ENST00000587411 LINC00588Q9Y4M8 146 aa10.38□□□□□ -0.75
RANBP3-209ENST00000587411 H0Y9P7 68 aa10.35□□□□□ -0.75
RANBP3-209ENST00000587411 PMAIP1Q13794 54 aa10.35□□□□□ -0.75
RANBP3-209ENST00000587411 TENM1Q9UKZ4 2725 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms