RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 C14orf177Q52M58 125 aa5.09□□□□□ -1.59
VMP1-204ENST00000587259 C15orf56Q8N910 161 aa5.09□□□□□ -1.59
VMP1-204ENST00000587259 TRBV10-2A0A0K0K1G8 114 aa5.08□□□□□ -1.6
VMP1-204ENST00000587259 NDUFC2-KCTD14E9PQ53 114 aa5.08□□□□□ -1.6
VMP1-204ENST00000587259 M0QXV9 152 aa5.08□□□□□ -1.6
VMP1-204ENST00000587259 UNQ6190/PRO20217Q6UXQ8 127 aa5.08□□□□□ -1.6
VMP1-204ENST00000587259 TMEM126AQ9H061 195 aa5.08□□□□□ -1.6
VMP1-204ENST00000587259 HMCN2Q8NDA2 5059 aa5.08□□□□□ -1.6
VMP1-204ENST00000587259 H0YGX0 51 aa5.07□□□□□ -1.6
VMP1-204ENST00000587259 H3BMG7 143 aa5.07□□□□□ -1.6
VMP1-204ENST00000587259 TRIAP1O43715 76 aa5.07□□□□□ -1.6
VMP1-204ENST00000587259 SNCGO76070 127 aa5.07□□□□□ -1.6
VMP1-204ENST00000587259 PLA2G1BP04054 148 aaKnown RBP5.07□□□□□ -1.6
VMP1-204ENST00000587259 RPL28P46779 137 aaKnown RBP5.07□□□□□ -1.6
VMP1-204ENST00000587259 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
VMP1-204ENST00000587259 SYCNQ0VAF6 134 aa5.07□□□□□ -1.6
VMP1-204ENST00000587259 HIGD2BQ4VC39 106 aa5.07□□□□□ -1.6
VMP1-204ENST00000587259 CARD19Q96LW7 228 aa5.07□□□□□ -1.6
VMP1-204ENST00000587259 C6orf48Q9UBA6 75 aa5.07□□□□□ -1.6
VMP1-204ENST00000587259 DNAH8Q96JB1 4490 aa5.07□□□□□ -1.6
VMP1-204ENST00000587259 J3QR89 54 aa5.06□□□□□ -1.6
VMP1-204ENST00000587259 TCL1BO95988 128 aa5.06□□□□□ -1.6
VMP1-204ENST00000587259 TLX1NBP0CAT3 122 aa5.06□□□□□ -1.6
VMP1-204ENST00000587259 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
VMP1-204ENST00000587259 Q6ZSA8 131 aa5.06□□□□□ -1.6
VMP1-204ENST00000587259 SCXQ7RTU7 201 aa5.06□□□□□ -1.6
VMP1-204ENST00000587259 IGKV2-28A0A075B6P5 120 aa5.05□□□□□ -1.6
VMP1-204ENST00000587259 USP17L23D6RBM5 183 aa5.05□□□□□ -1.6
VMP1-204ENST00000587259 K7ERU9 68 aa5.05□□□□□ -1.6
VMP1-204ENST00000587259 LST1O00453 97 aa5.05□□□□□ -1.6
VMP1-204ENST00000587259 IGKV2D-28P01615 120 aa5.05□□□□□ -1.6
VMP1-204ENST00000587259 S100A7L2Q5SY68 101 aa5.05□□□□□ -1.6
VMP1-204ENST00000587259 C10orf25Q5T742 122 aa5.05□□□□□ -1.6
VMP1-204ENST00000587259 LINC00337Q8N6G1 96 aa5.05□□□□□ -1.6
VMP1-204ENST00000587259 OR13C6PQ8NH95 151 aa5.05□□□□□ -1.6
VMP1-204ENST00000587259 PLA2G2DQ9UNK4 145 aa5.05□□□□□ -1.6
VMP1-204ENST00000587259 A0A1B0GX51 115 aa5.04□□□□□ -1.6
VMP1-204ENST00000587259 H3BT86 120 aa5.04□□□□□ -1.6
VMP1-204ENST00000587259 TRACP01848 142 aa5.04□□□□□ -1.6
VMP1-204ENST00000587259 C9orf116Q5BN46 136 aaPredicted RBP5.04□□□□□ -1.6
VMP1-204ENST00000587259 Q6ZRU5 148 aa5.04□□□□□ -1.6
VMP1-204ENST00000587259 SLC25A20O43772 301 aa5.03□□□□□ -1.6
VMP1-204ENST00000587259 DNAL4O96015 105 aa5.03□□□□□ -1.6
VMP1-204ENST00000587259 SERTAD4-AS1Q5TG53 156 aa5.03□□□□□ -1.6
VMP1-204ENST00000587259 CIRBP-AS1Q8TBR5 109 aa5.03□□□□□ -1.6
VMP1-204ENST00000587259 LINC00526Q96FQ7 95 aa5.03□□□□□ -1.6
VMP1-204ENST00000587259 LINC01600Q96MT4 127 aa5.03□□□□□ -1.6
VMP1-204ENST00000587259 FAT3Q8TDW7 4589 aa5.02□□□□□ -1.61
VMP1-204ENST00000587259 LOC107984640A0A0U1RRK4 108 aa5.02□□□□□ -1.61
VMP1-204ENST00000587259 C9JAW5 83 aa5.02□□□□□ -1.61
VMP1-204ENST00000587259 CNBPP62633 177 aaKnown RBP5.02□□□□□ -1.61
VMP1-204ENST00000587259 SMIM11BQ8TCY0 68 aa5.02□□□□□ -1.61
VMP1-204ENST00000587259 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
VMP1-204ENST00000587259 PRO0461Q9UI25 63 aa5.02□□□□□ -1.61
VMP1-204ENST00000587259 H3BQ85 93 aa5.01□□□□□ -1.61
VMP1-204ENST00000587259 M0R378 163 aa5.01□□□□□ -1.61
VMP1-204ENST00000587259 TEN1Q86WV5 123 aa5.01□□□□□ -1.61
VMP1-204ENST00000587259 ANKRD29Q8N6D5 301 aa5.01□□□□□ -1.61
VMP1-204ENST00000587259 TRBV7-6A0A0J9YX20 115 aa5□□□□□ -1.61
VMP1-204ENST00000587259 NCR3O14931 201 aa5□□□□□ -1.61
VMP1-204ENST00000587259 IGLV6-57P01721 117 aa5□□□□□ -1.61
VMP1-204ENST00000587259 RPL18AQ02543 176 aaKnown RBP5□□□□□ -1.61
VMP1-204ENST00000587259 OCIAD2Q56VL3 154 aa5□□□□□ -1.61
VMP1-204ENST00000587259 NKAPP1Q8N9T2 125 aa5□□□□□ -1.61
VMP1-204ENST00000587259 TRAV23DV6A0A075B6W5 121 aa4.99□□□□□ -1.61
VMP1-204ENST00000587259 VPREB1P12018 145 aa4.99□□□□□ -1.61
VMP1-204ENST00000587259 GAGE2EQ4V326 116 aa4.99□□□□□ -1.61
VMP1-204ENST00000587259 Q6ZRP5 223 aa4.99□□□□□ -1.61
VMP1-204ENST00000587259 PPDPFLQ8WWR9 84 aa4.99□□□□□ -1.61
VMP1-204ENST00000587259 CLEC2BQ92478 149 aa4.99□□□□□ -1.61
VMP1-204ENST00000587259 DIRC1Q969H9 104 aa4.99□□□□□ -1.61
VMP1-204ENST00000587259 XAGE1AQ9HD64 81 aa4.99□□□□□ -1.61
VMP1-204ENST00000587259 GAGE2DQ9UEU5 116 aa4.99□□□□□ -1.61
VMP1-204ENST00000587259 IGLV5-37A0A075B6J1 123 aa4.98□□□□□ -1.61
VMP1-204ENST00000587259 OXTP01178 125 aa4.98□□□□□ -1.61
VMP1-204ENST00000587259 MT1HL1P0DM35 61 aa4.98□□□□□ -1.61
VMP1-204ENST00000587259 ETDBQ3ZM63 59 aa4.98□□□□□ -1.61
VMP1-204ENST00000587259 LINC00474Q9P2X8 69 aa4.98□□□□□ -1.61
VMP1-204ENST00000587259 PANO1I0J062 215 aa4.97□□□□□ -1.61
VMP1-204ENST00000587259 RPL37AP61513 92 aaKnown RBP4.97□□□□□ -1.61
VMP1-204ENST00000587259 C6orf99Q4VX62 202 aa4.97□□□□□ -1.61
VMP1-204ENST00000587259 TRBV10-3A0A0K0K1G6 114 aa4.96□□□□□ -1.62
VMP1-204ENST00000587259 ZNF73O43830 326 aaPredicted RBP4.96□□□□□ -1.62
VMP1-204ENST00000587259 MTURNQ8N3F0 131 aa4.96□□□□□ -1.62
VMP1-204ENST00000587259 ORMDL1Q9P0S3 153 aa4.96□□□□□ -1.62
VMP1-204ENST00000587259 TMEM256-PLSCR3K7ERE1 68 aa4.95□□□□□ -1.62
VMP1-204ENST00000587259 PRYO14603 147 aa4.95□□□□□ -1.62
VMP1-204ENST00000587259 PRR3P79522 188 aaKnown RBP4.95□□□□□ -1.62
VMP1-204ENST00000587259 GAGE2BQ13066 116 aa4.95□□□□□ -1.62
VMP1-204ENST00000587259 C21orf62-AS1Q17RA5 79 aa4.95□□□□□ -1.62
VMP1-204ENST00000587259 C9orf129Q5T035 196 aaKnown RBP4.95□□□□□ -1.62
VMP1-204ENST00000587259 PKHD1L1Q86WI1 4243 aa4.95□□□□□ -1.62
VMP1-204ENST00000587259 A0A087WYN8 130 aa4.94□□□□□ -1.62
VMP1-204ENST00000587259 SLPIP03973 132 aa4.94□□□□□ -1.62
VMP1-204ENST00000587259 BAALC-AS2P0C853 105 aa4.94□□□□□ -1.62
VMP1-204ENST00000587259 COX7BP24311 80 aa4.94□□□□□ -1.62
VMP1-204ENST00000587259 ELOF1P60002 83 aaKnown RBP4.94□□□□□ -1.62
VMP1-204ENST00000587259 C9orf163Q8N9P6 203 aa4.94□□□□□ -1.62
VMP1-204ENST00000587259 Q8NDZ9 215 aa4.94□□□□□ -1.62
VMP1-204ENST00000587259 LINC00167Q96N53 147 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms