RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 PCP2Q8IVA1 136 aa4.9□□□□□ -1.63
SMAD4-204ENST00000586253 SPANXB1Q9NS25 103 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-204ENST00000586253 MYCBP2O75592 4640 aa4.89□□□□□ -1.63
SMAD4-204ENST00000586253 IGKV2-28A0A075B6P5 120 aa4.89□□□□□ -1.63
SMAD4-204ENST00000586253 RPL37AP8A6NKH3 93 aa4.89□□□□□ -1.63
SMAD4-204ENST00000586253 BCE1O60756 84 aa4.89□□□□□ -1.63
SMAD4-204ENST00000586253 IGKV2D-28P01615 120 aa4.89□□□□□ -1.63
SMAD4-204ENST00000586253 JOSD1Q15040 202 aaPredicted RBP4.89□□□□□ -1.63
SMAD4-204ENST00000586253 Q6ZVH6 145 aa4.89□□□□□ -1.63
SMAD4-204ENST00000586253 COPS9Q8WXC6 57 aa4.89□□□□□ -1.63
SMAD4-204ENST00000586253 DIRC1Q969H9 104 aa4.89□□□□□ -1.63
SMAD4-204ENST00000586253 SPANXDQ9BXN6 97 aa4.89□□□□□ -1.63
SMAD4-204ENST00000586253 PPDPFQ9H3Y8 114 aa4.89□□□□□ -1.63
SMAD4-204ENST00000586253 SPANXCQ9NY87 97 aa4.89□□□□□ -1.63
SMAD4-204ENST00000586253 ZNF861PO60384 105 aa4.88□□□□□ -1.63
SMAD4-204ENST00000586253 REG3GQ6UW15 175 aa4.88□□□□□ -1.63
SMAD4-204ENST00000586253 SOSTDC1Q6X4U4 206 aa4.88□□□□□ -1.63
SMAD4-204ENST00000586253 LINC00308Q8TCZ7 52 aa4.88□□□□□ -1.63
SMAD4-204ENST00000586253 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
SMAD4-204ENST00000586253 NCR3O14931 201 aa4.87□□□□□ -1.63
SMAD4-204ENST00000586253 IFITM1P13164 125 aa4.87□□□□□ -1.63
SMAD4-204ENST00000586253 RPL28P46779 137 aaKnown RBP4.87□□□□□ -1.63
SMAD4-204ENST00000586253 S100A12P80511 92 aa4.87□□□□□ -1.63
SMAD4-204ENST00000586253 TMEM126AQ9H061 195 aa4.87□□□□□ -1.63
SMAD4-204ENST00000586253 KCNQ1DNQ9H478 68 aa4.87□□□□□ -1.63
SMAD4-204ENST00000586253 TRBV10-3A0A0K0K1G6 114 aa4.86□□□□□ -1.63
SMAD4-204ENST00000586253 H0Y9J4 135 aa4.86□□□□□ -1.63
SMAD4-204ENST00000586253 DLEU1O43261 78 aa4.86□□□□□ -1.63
SMAD4-204ENST00000586253 IGLV6-57P01721 117 aa4.86□□□□□ -1.63
SMAD4-204ENST00000586253 COX8AP10176 69 aa4.86□□□□□ -1.63
SMAD4-204ENST00000586253 NPC2P61916 151 aa4.86□□□□□ -1.63
SMAD4-204ENST00000586253 KRTAP13-1Q8IUC0 172 aa4.86□□□□□ -1.63
SMAD4-204ENST00000586253 DMBT1Q9UGM3 2413 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-204ENST00000586253 DDTP30046 118 aa4.85□□□□□ -1.63
SMAD4-204ENST00000586253 SPRR1AP35321 89 aa4.85□□□□□ -1.63
SMAD4-204ENST00000586253 UBE2AP49459 152 aa4.85□□□□□ -1.63
SMAD4-204ENST00000586253 LINC00518Q8N0U6 118 aa4.85□□□□□ -1.63
SMAD4-204ENST00000586253 LINC01600Q96MT4 127 aa4.85□□□□□ -1.63
SMAD4-204ENST00000586253 VAMP8Q9BV40 100 aa4.85□□□□□ -1.63
SMAD4-204ENST00000586253 CBY1Q9Y3M2 126 aa4.85□□□□□ -1.63
SMAD4-204ENST00000586253 CTAG1AP78358 180 aa4.84□□□□□ -1.63
SMAD4-204ENST00000586253 S100A7L2Q5SY68 101 aa4.84□□□□□ -1.63
SMAD4-204ENST00000586253 LINC00337Q8N6G1 96 aa4.84□□□□□ -1.63
SMAD4-204ENST00000586253 PAM16Q9Y3D7 125 aa4.84□□□□□ -1.63
SMAD4-204ENST00000586253 LRP1Q07954 4544 aaKnown RBP4.84□□□□□ -1.63
SMAD4-204ENST00000586253 KRTAP4-16G5E9R7 235 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-204ENST00000586253 SPATA45Q537H7 98 aa4.83□□□□□ -1.64
SMAD4-204ENST00000586253 PYY3Q5JQD4 70 aa4.83□□□□□ -1.64
SMAD4-204ENST00000586253 FAM19A1Q7Z5A9 133 aa4.83□□□□□ -1.64
SMAD4-204ENST00000586253 FAT3Q8TDW7 4589 aa4.83□□□□□ -1.64
SMAD4-204ENST00000586253 TRAV23DV6A0A075B6W5 121 aa4.82□□□□□ -1.64
SMAD4-204ENST00000586253 MT1HL1P0DM35 61 aa4.82□□□□□ -1.64
SMAD4-204ENST00000586253 PRLHP81277 87 aa4.82□□□□□ -1.64
SMAD4-204ENST00000586253 MUSTN1Q8IVN3 82 aa4.82□□□□□ -1.64
SMAD4-204ENST00000586253 ETDCA0A1B0GVM5 59 aa4.81□□□□□ -1.64
SMAD4-204ENST00000586253 A4D1N5 150 aa4.81□□□□□ -1.64
SMAD4-204ENST00000586253 ZNF73O43830 326 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-204ENST00000586253 KRTAP1-4P0C5Y4 121 aa4.81□□□□□ -1.64
SMAD4-204ENST00000586253 SLC25A34Q6PIV7 304 aa4.81□□□□□ -1.64
SMAD4-204ENST00000586253 MPLKIPQ8TAP9 179 aa4.81□□□□□ -1.64
SMAD4-204ENST00000586253 C14orf144Q96I85 54 aa4.81□□□□□ -1.64
SMAD4-204ENST00000586253 HIGD1BQ9P298 99 aa4.81□□□□□ -1.64
SMAD4-204ENST00000586253 KRTAP10-8P60410 259 aa4.8□□□□□ -1.64
SMAD4-204ENST00000586253 OR13C6PQ8NH95 151 aa4.8□□□□□ -1.64
SMAD4-204ENST00000586253 HIST1H4GQ99525 98 aa4.8□□□□□ -1.64
SMAD4-204ENST00000586253 TNXBP22105 4242 aa4.8□□□□□ -1.64
SMAD4-204ENST00000586253 TRAV13-2A0A0B4J235 113 aa4.79□□□□□ -1.64
SMAD4-204ENST00000586253 RPL13AP40429 203 aaKnown RBP4.79□□□□□ -1.64
SMAD4-204ENST00000586253 HINT1P49773 126 aaPredicted RBP4.79□□□□□ -1.64
SMAD4-204ENST00000586253 UBE2V1Q13404 147 aa4.79□□□□□ -1.64
SMAD4-204ENST00000586253 Q6ZRX8 168 aa4.79□□□□□ -1.64
SMAD4-204ENST00000586253 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
SMAD4-204ENST00000586253 FAM229BQ4G0N7 80 aa4.78□□□□□ -1.64
SMAD4-204ENST00000586253 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
SMAD4-204ENST00000586253 C2orf91Q6ZV80 131 aa4.78□□□□□ -1.64
SMAD4-204ENST00000586253 HIGD2AQ9BW72 106 aa4.78□□□□□ -1.64
SMAD4-204ENST00000586253 ZNF706Q9Y5V0 76 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-204ENST00000586253 TRBV7-6A0A0J9YX20 115 aa4.77□□□□□ -1.65
SMAD4-204ENST00000586253 A6NDN8 102 aa4.77□□□□□ -1.65
SMAD4-204ENST00000586253 TAL2Q16559 108 aa4.77□□□□□ -1.65
SMAD4-204ENST00000586253 SMCR5Q8TEV8 140 aa4.77□□□□□ -1.65
SMAD4-204ENST00000586253 CRYGAP11844 174 aa4.76□□□□□ -1.65
SMAD4-204ENST00000586253 PRR26Q8N8Z3 221 aa4.76□□□□□ -1.65
SMAD4-204ENST00000586253 SPRR4Q96PI1 79 aa4.76□□□□□ -1.65
SMAD4-204ENST00000586253 Q9BRP9 147 aa4.76□□□□□ -1.65
SMAD4-204ENST00000586253 A0A087X002 238 aa4.75□□□□□ -1.65
SMAD4-204ENST00000586253 SMIM6P0DI80 62 aa4.75□□□□□ -1.65
SMAD4-204ENST00000586253 ELOF1P60002 83 aaKnown RBP4.75□□□□□ -1.65
SMAD4-204ENST00000586253 C6orf99Q4VX62 202 aa4.75□□□□□ -1.65
SMAD4-204ENST00000586253 DHRS4-AS1Q9P1J3 65 aa4.75□□□□□ -1.65
SMAD4-204ENST00000586253 UQCR10Q9UDW1 63 aa4.75□□□□□ -1.65
SMAD4-204ENST00000586253 A0A1B0GWB2 263 aa4.74□□□□□ -1.65
SMAD4-204ENST00000586253 COX7BP24311 80 aa4.74□□□□□ -1.65
SMAD4-204ENST00000586253 LINC00483Q53H64 154 aa4.74□□□□□ -1.65
SMAD4-204ENST00000586253 CEND1Q8N111 149 aa4.74□□□□□ -1.65
SMAD4-204ENST00000586253 SMIM11BQ8TCY0 68 aa4.74□□□□□ -1.65
SMAD4-204ENST00000586253 A0A0B4J2C4 111 aa4.73□□□□□ -1.65
SMAD4-204ENST00000586253 ERC2-IT1O76042 136 aa4.73□□□□□ -1.65
SMAD4-204ENST00000586253 HSD52Q0P140 79 aa4.73□□□□□ -1.65
SMAD4-204ENST00000586253 Q75L30 129 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms