RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 LRP2P98164 4655 aa12.75□□□□□ -0.37
R3HDM4-202ENST00000586080 SPRR4Q96PI1 79 aa12.75□□□□□ -0.37
R3HDM4-202ENST00000586080 SPANXCQ9NY87 97 aa12.75□□□□□ -0.37
R3HDM4-202ENST00000586080 SMCR5Q8TEV8 140 aa12.74□□□□□ -0.37
R3HDM4-202ENST00000586080 B5MCH6 92 aa12.73□□□□□ -0.37
R3HDM4-202ENST00000586080 OR13C6PQ8NH95 151 aa12.73□□□□□ -0.37
R3HDM4-202ENST00000586080 PCP2Q8IVA1 136 aa12.71□□□□□ -0.37
R3HDM4-202ENST00000586080 SNRPEP62304 92 aaKnown RBP12.7□□□□□ -0.38
R3HDM4-202ENST00000586080 PPDPFQ9H3Y8 114 aa12.7□□□□□ -0.38
R3HDM4-202ENST00000586080 ZNF73O43830 326 aaPredicted RBP12.69□□□□□ -0.38
R3HDM4-202ENST00000586080 Q6ZRX8 168 aa12.69□□□□□ -0.38
R3HDM4-202ENST00000586080 C3orf22Q8N5N4 141 aa12.69□□□□□ -0.38
R3HDM4-202ENST00000586080 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
R3HDM4-202ENST00000586080 HSBP1L1C9JCN9 74 aa12.68□□□□□ -0.38
R3HDM4-202ENST00000586080 LINC00304Q8N9R0 145 aa12.68□□□□□ -0.38
R3HDM4-202ENST00000586080 CBY1Q9Y3M2 126 aa12.68□□□□□ -0.38
R3HDM4-202ENST00000586080 PRR4Q16378 134 aa12.67□□□□□ -0.38
R3HDM4-202ENST00000586080 ERC2-IT1O76042 136 aa12.66□□□□□ -0.38
R3HDM4-202ENST00000586080 COPS9Q8WXC6 57 aa12.66□□□□□ -0.38
R3HDM4-202ENST00000586080 Q9BRP9 147 aa12.66□□□□□ -0.38
R3HDM4-202ENST00000586080 HINT1P49773 126 aaPredicted RBP12.65□□□□□ -0.38
R3HDM4-202ENST00000586080 JOSD1Q15040 202 aaPredicted RBP12.65□□□□□ -0.38
R3HDM4-202ENST00000586080 GAGE2AQ6NT46 116 aa12.65□□□□□ -0.38
R3HDM4-202ENST00000586080 LINC00518Q8N0U6 118 aa12.64□□□□□ -0.39
R3HDM4-202ENST00000586080 SCGB1D1O95968 90 aa12.62□□□□□ -0.39
R3HDM4-202ENST00000586080 IFITM1P13164 125 aa12.62□□□□□ -0.39
R3HDM4-202ENST00000586080 Q6ZVH6 145 aa12.61□□□□□ -0.39
R3HDM4-202ENST00000586080 C5orf52A6NGY3 159 aa12.6□□□□□ -0.39
R3HDM4-202ENST00000586080 MUSTN1Q8IVN3 82 aa12.6□□□□□ -0.39
R3HDM4-202ENST00000586080 LINC00483Q53H64 154 aa12.59□□□□□ -0.39
R3HDM4-202ENST00000586080 LPAP08519 4548 aa12.59□□□□□ -0.39
R3HDM4-202ENST00000586080 IGLV9-49A0A0B4J1Y8 123 aa12.56□□□□□ -0.4
R3HDM4-202ENST00000586080 A6NDN8 102 aa12.56□□□□□ -0.4
R3HDM4-202ENST00000586080 C6orf99Q4VX62 202 aa12.55□□□□□ -0.4
R3HDM4-202ENST00000586080 Q8NBF4 154 aa12.55□□□□□ -0.4
R3HDM4-202ENST00000586080 RETNLBQ9BQ08 111 aa12.55□□□□□ -0.4
R3HDM4-202ENST00000586080 COX7BP24311 80 aa12.54□□□□□ -0.4
R3HDM4-202ENST00000586080 C4orf48Q5BLP8 95 aa12.54□□□□□ -0.4
R3HDM4-202ENST00000586080 ST20-AS1Q8NBB2 130 aa12.54□□□□□ -0.4
R3HDM4-202ENST00000586080 MOBPQ13875 183 aa12.53□□□□□ -0.4
R3HDM4-202ENST00000586080 SPAG11AQ6PDA7 123 aa12.52□□□□□ -0.41
R3HDM4-202ENST00000586080 DHRS4-AS1Q9P1J3 65 aa12.52□□□□□ -0.41
R3HDM4-202ENST00000586080 ELOF1P60002 83 aaKnown RBP12.51□□□□□ -0.41
R3HDM4-202ENST00000586080 TRAV13-2A0A0B4J235 113 aa12.49□□□□□ -0.41
R3HDM4-202ENST00000586080 C9orf153Q5TBE3 101 aa12.48□□□□□ -0.41
R3HDM4-202ENST00000586080 CTAG1AP78358 180 aa12.47□□□□□ -0.41
R3HDM4-202ENST00000586080 COX8AP10176 69 aa12.44□□□□□ -0.42
R3HDM4-202ENST00000586080 SSBP3-AS1Q7Z2R9 100 aa12.44□□□□□ -0.42
R3HDM4-202ENST00000586080 TRBV7-6A0A0J9YX20 115 aa12.43□□□□□ -0.42
R3HDM4-202ENST00000586080 A0A1B0GWB2 263 aa12.43□□□□□ -0.42
R3HDM4-202ENST00000586080 A4D1N5 150 aa12.43□□□□□ -0.42
R3HDM4-202ENST00000586080 PAM16Q9Y3D7 125 aa12.43□□□□□ -0.42
R3HDM4-202ENST00000586080 RNF213Q63HN8 5207 aa12.42□□□□□ -0.42
R3HDM4-202ENST00000586080 SMIM11BQ8TCY0 68 aa12.42□□□□□ -0.42
R3HDM4-202ENST00000586080 HIST1H4GQ99525 98 aa12.42□□□□□ -0.42
R3HDM4-202ENST00000586080 SPATA45Q537H7 98 aa12.41□□□□□ -0.42
R3HDM4-202ENST00000586080 DEFB105AQ8NG35 78 aa12.41□□□□□ -0.42
R3HDM4-202ENST00000586080 SPINK1P00995 79 aa12.4□□□□□ -0.42
R3HDM4-202ENST00000586080 SLC25A34Q6PIV7 304 aa12.4□□□□□ -0.42
R3HDM4-202ENST00000586080 C14orf144Q96I85 54 aa12.4□□□□□ -0.42
R3HDM4-202ENST00000586080 VAMP8Q9BV40 100 aa12.4□□□□□ -0.42
R3HDM4-202ENST00000586080 IGLV7-46A0A075B6I9 117 aa12.39□□□□□ -0.43
R3HDM4-202ENST00000586080 TAL2Q16559 108 aa12.39□□□□□ -0.43
R3HDM4-202ENST00000586080 C12orf57Q99622 126 aa12.39□□□□□ -0.43
R3HDM4-202ENST00000586080 SPRR1BP22528 89 aa12.38□□□□□ -0.43
R3HDM4-202ENST00000586080 DLEU1O43261 78 aa12.37□□□□□ -0.43
R3HDM4-202ENST00000586080 LAMTOR3Q9UHA4 124 aa12.37□□□□□ -0.43
R3HDM4-202ENST00000586080 TMA7Q9Y2S6 64 aaKnown RBP12.35□□□□□ -0.43
R3HDM4-202ENST00000586080 Q1RN00 199 aa12.34□□□□□ -0.43
R3HDM4-202ENST00000586080 NHP2Q9NX24 153 aaKnown RBP12.34□□□□□ -0.43
R3HDM4-202ENST00000586080 TEX49A0A1B0GTD5 131 aa12.33□□□□□ -0.44
R3HDM4-202ENST00000586080 VAMP3Q15836 100 aa12.33□□□□□ -0.44
R3HDM4-202ENST00000586080 SLC25A20O43772 301 aa12.31□□□□□ -0.44
R3HDM4-202ENST00000586080 RPS29P62273 56 aaKnown RBP12.3□□□□□ -0.44
R3HDM4-202ENST00000586080 TPRXLQ17RH7 258 aa12.3□□□□□ -0.44
R3HDM4-202ENST00000586080 FP248Q71RG6 208 aaPredicted RBP12.3□□□□□ -0.44
R3HDM4-202ENST00000586080 CDIP1Q9H305 208 aa12.29□□□□□ -0.44
R3HDM4-202ENST00000586080 HRCT1Q6UXD1 115 aa12.28□□□□□ -0.44
R3HDM4-202ENST00000586080 Q8N377 158 aa12.28□□□□□ -0.44
R3HDM4-202ENST00000586080 HIGD1BQ9P298 99 aa12.28□□□□□ -0.44
R3HDM4-202ENST00000586080 LINC01547P58512 204 aaPredicted RBP12.27□□□□□ -0.45
R3HDM4-202ENST00000586080 IGLV5-48A0A075B6I7 105 aa12.26□□□□□ -0.45
R3HDM4-202ENST00000586080 H7C2G1 150 aa12.26□□□□□ -0.45
R3HDM4-202ENST00000586080 C2orf91Q6ZV80 131 aa12.26□□□□□ -0.45
R3HDM4-202ENST00000586080 LINC00575Q6W349 94 aa12.25□□□□□ -0.45
R3HDM4-202ENST00000586080 RAB37Q96AX2 223 aa12.25□□□□□ -0.45
R3HDM4-202ENST00000586080 PYY3Q5JQD4 70 aa12.24□□□□□ -0.45
R3HDM4-202ENST00000586080 SMIM29Q86T20 159 aa12.23□□□□□ -0.45
R3HDM4-202ENST00000586080 PRO1933Q9H354 126 aa12.23□□□□□ -0.45
R3HDM4-202ENST00000586080 hADV29S1A0JD25 119 aa12.22□□□□□ -0.45
R3HDM4-202ENST00000586080 CFC1BP0CG36 223 aa12.22□□□□□ -0.45
R3HDM4-202ENST00000586080 CFC1P0CG37 223 aa12.22□□□□□ -0.45
R3HDM4-202ENST00000586080 BVES-AS1Q5T3Y7 98 aa12.21□□□□□ -0.45
R3HDM4-202ENST00000586080 Q6ZQY7 126 aa12.2□□□□□ -0.46
R3HDM4-202ENST00000586080 LIMD2Q9BT23 127 aa12.2□□□□□ -0.46
R3HDM4-202ENST00000586080 A0A0B4J2C4 111 aa12.18□□□□□ -0.46
R3HDM4-202ENST00000586080 CEND1Q8N111 149 aa12.18□□□□□ -0.46
R3HDM4-202ENST00000586080 F8WEM9 126 aa12.17□□□□□ -0.46
R3HDM4-202ENST00000586080 TMEM238LA0A1B0GVL6 79 aa12.16□□□□□ -0.46
R3HDM4-202ENST00000586080 A6NJY4 79 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms