RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 NOTCH1P46531 2555 aa8.08□□□□□ -1.12
CDK5RAP3-232ENST00000584168 LINC01554Q52M75 96 aa8.07□□□□□ -1.12
CDK5RAP3-232ENST00000584168 Q8N9L7 120 aa8.07□□□□□ -1.12
CDK5RAP3-232ENST00000584168 PRB2P02812 416 aaPredicted RBP8.07□□□□□ -1.12
CDK5RAP3-232ENST00000584168 IGKV4-1P06312 121 aa8.07□□□□□ -1.12
CDK5RAP3-232ENST00000584168 PRR4Q16378 134 aa8.06□□□□□ -1.12
CDK5RAP3-232ENST00000584168 Q8N9P0 234 aaPredicted RBP8.06□□□□□ -1.12
CDK5RAP3-232ENST00000584168 CDC42SE1Q9NRR8 79 aa8.06□□□□□ -1.12
CDK5RAP3-232ENST00000584168 LINC00313P59037 77 aa8.06□□□□□ -1.12
CDK5RAP3-232ENST00000584168 Q75L30 129 aa8.06□□□□□ -1.12
CDK5RAP3-232ENST00000584168 MAP6D1Q9H9H5 199 aa8.06□□□□□ -1.12
CDK5RAP3-232ENST00000584168 ODF3L2Q3SX64 289 aa8.05□□□□□ -1.12
CDK5RAP3-232ENST00000584168 LCE6AA0A183 80 aa8.05□□□□□ -1.12
CDK5RAP3-232ENST00000584168 MOBPQ13875 183 aa8.04□□□□□ -1.12
CDK5RAP3-232ENST00000584168 MUC7Q8TAX7 377 aa8.04□□□□□ -1.12
CDK5RAP3-232ENST00000584168 ZCCHC13Q8WW36 166 aaKnown RBP8.04□□□□□ -1.12
CDK5RAP3-232ENST00000584168 IGHV3-53P01767 116 aa8.04□□□□□ -1.12
CDK5RAP3-232ENST00000584168 FAM30AQ9NZY2 134 aa8.03□□□□□ -1.12
CDK5RAP3-232ENST00000584168 A8MTW9 85 aa8.02□□□□□ -1.13
CDK5RAP3-232ENST00000584168 TOMM7Q9P0U1 55 aa8.02□□□□□ -1.13
CDK5RAP3-232ENST00000584168 CDC42SE2Q9NRR3 84 aa8.02□□□□□ -1.13
CDK5RAP3-232ENST00000584168 K7EQD1 137 aa8.01□□□□□ -1.13
CDK5RAP3-232ENST00000584168 CELA1Q9UNI1 258 aa8.01□□□□□ -1.13
CDK5RAP3-232ENST00000584168 IGLV4-60A0A075B6I1 120 aa8.01□□□□□ -1.13
CDK5RAP3-232ENST00000584168 IGLV1-51P01701 117 aa8.01□□□□□ -1.13
CDK5RAP3-232ENST00000584168 C9orf116Q5BN46 136 aaPredicted RBP8.01□□□□□ -1.13
CDK5RAP3-232ENST00000584168 LOC100131303A0A0U1RQF7 123 aa7.99□□□□□ -1.13
CDK5RAP3-232ENST00000584168 MGAM2Q2M2H8 2515 aa7.99□□□□□ -1.13
CDK5RAP3-232ENST00000584168 INSP01308 110 aa7.99□□□□□ -1.13
CDK5RAP3-232ENST00000584168 LINC00575Q6W349 94 aa7.99□□□□□ -1.13
CDK5RAP3-232ENST00000584168 LINC00612Q8N6U2 182 aa7.99□□□□□ -1.13
CDK5RAP3-232ENST00000584168 PRAC1Q96KF2 57 aa7.99□□□□□ -1.13
CDK5RAP3-232ENST00000584168 NBEAL1Q6ZS30 2694 aa7.99□□□□□ -1.13
CDK5RAP3-232ENST00000584168 SMIM29Q86T20 159 aa7.97□□□□□ -1.13
CDK5RAP3-232ENST00000584168 TRGV1A0A0A0MS02 117 aa7.97□□□□□ -1.13
CDK5RAP3-232ENST00000584168 LOC101927531A0A1B0GV80 90 aa7.97□□□□□ -1.13
CDK5RAP3-232ENST00000584168 MP68P56378 58 aa7.96□□□□□ -1.13
CDK5RAP3-232ENST00000584168 C6orf99Q4VX62 202 aa7.96□□□□□ -1.13
CDK5RAP3-232ENST00000584168 B9D2Q9BPU9 175 aa7.96□□□□□ -1.14
CDK5RAP3-232ENST00000584168 C19orf73Q9NVV2 129 aa7.96□□□□□ -1.14
CDK5RAP3-232ENST00000584168 ANK2Q01484 3957 aa7.96□□□□□ -1.14
CDK5RAP3-232ENST00000584168 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.94□□□□□ -1.14
CDK5RAP3-232ENST00000584168 PRR3P79522 188 aaKnown RBP7.94□□□□□ -1.14
CDK5RAP3-232ENST00000584168 C10orf25Q5T742 122 aa7.94□□□□□ -1.14
CDK5RAP3-232ENST00000584168 NDUFB1O75438 58 aa7.94□□□□□ -1.14
CDK5RAP3-232ENST00000584168 ELOF1P60002 83 aaKnown RBP7.94□□□□□ -1.14
CDK5RAP3-232ENST00000584168 LINC00208Q96KT6 92 aa7.94□□□□□ -1.14
CDK5RAP3-232ENST00000584168 H3BQ85 93 aa7.93□□□□□ -1.14
CDK5RAP3-232ENST00000584168 GIG44P09565 113 aaPredicted RBP7.93□□□□□ -1.14
CDK5RAP3-232ENST00000584168 CMYA5Q8N3K9 4069 aa7.93□□□□□ -1.14
CDK5RAP3-232ENST00000584168 TRGV2A0A075B6R0 118 aa7.92□□□□□ -1.14
CDK5RAP3-232ENST00000584168 DEFB4AO15263 64 aa7.92□□□□□ -1.14
CDK5RAP3-232ENST00000584168 KRTAP10-11P60412 298 aa7.92□□□□□ -1.14
CDK5RAP3-232ENST00000584168 Q6ZQY7 126 aa7.92□□□□□ -1.14
CDK5RAP3-232ENST00000584168 ETDCA0A1B0GVM5 59 aa7.9□□□□□ -1.14
CDK5RAP3-232ENST00000584168 COX7BP24311 80 aa7.9□□□□□ -1.14
CDK5RAP3-232ENST00000584168 C3orf84H3BNL1 204 aa7.9□□□□□ -1.15
CDK5RAP3-232ENST00000584168 Q9BRP9 147 aa7.9□□□□□ -1.15
CDK5RAP3-232ENST00000584168 KIAA0087Q14695 138 aa7.89□□□□□ -1.15
CDK5RAP3-232ENST00000584168 NOP10Q9NPE3 64 aaKnown RBP7.89□□□□□ -1.15
CDK5RAP3-232ENST00000584168 CMC4P56277 68 aaPredicted RBP7.89□□□□□ -1.15
CDK5RAP3-232ENST00000584168 IGKV3OR2-268A0A0C4DH90 116 aa7.88□□□□□ -1.15
CDK5RAP3-232ENST00000584168 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.88□□□□□ -1.15
CDK5RAP3-232ENST00000584168 ST20-AS1Q8NBB2 130 aa7.88□□□□□ -1.15
CDK5RAP3-232ENST00000584168 TENM3Q9P273 2699 aa7.88□□□□□ -1.15
CDK5RAP3-232ENST00000584168 DEFB135Q30KP9 77 aa7.87□□□□□ -1.15
CDK5RAP3-232ENST00000584168 CASC2Q6XLA1 102 aa7.87□□□□□ -1.15
CDK5RAP3-232ENST00000584168 ADM2Q7Z4H4 148 aa7.86□□□□□ -1.15
CDK5RAP3-232ENST00000584168 KRTAP21-3Q3LHN1 58 aa7.85□□□□□ -1.15
CDK5RAP3-232ENST00000584168 IGHV4-30-4P0DP06 118 aa7.85□□□□□ -1.15
CDK5RAP3-232ENST00000584168 CSNK1G2-AS1Q8NCQ2 148 aa7.84□□□□□ -1.15
CDK5RAP3-232ENST00000584168 KLK12Q9UKR0 248 aa7.84□□□□□ -1.15
CDK5RAP3-232ENST00000584168 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.16
CDK5RAP3-232ENST00000584168 ZNF706Q9Y5V0 76 aaPredicted RBP7.84□□□□□ -1.16
CDK5RAP3-232ENST00000584168 DNHD1Q96M86 4753 aa7.83□□□□□ -1.16
CDK5RAP3-232ENST00000584168 SPANXA2-OT1Q8N9U9 137 aa7.83□□□□□ -1.16
CDK5RAP3-232ENST00000584168 IGHV3OR16-9A0A0B4J2B5 98 aa7.82□□□□□ -1.16
CDK5RAP3-232ENST00000584168 TRGV4A0A0C4DH28 118 aa7.82□□□□□ -1.16
CDK5RAP3-232ENST00000584168 H0Y9J4 135 aa7.82□□□□□ -1.16
CDK5RAP3-232ENST00000584168 DEFB130BP0DP73 79 aa7.82□□□□□ -1.16
CDK5RAP3-232ENST00000584168 DEFB130AP0DP74 79 aa7.82□□□□□ -1.16
CDK5RAP3-232ENST00000584168 HIGD2BQ4VC39 106 aa7.81□□□□□ -1.16
CDK5RAP3-232ENST00000584168 EGFEM1PQ0D2K5 195 aa7.81□□□□□ -1.16
CDK5RAP3-232ENST00000584168 C16orf74Q96GX8 76 aa7.81□□□□□ -1.16
CDK5RAP3-232ENST00000584168 DNAH3Q8TD57 4116 aa7.8□□□□□ -1.16
CDK5RAP3-232ENST00000584168 SPINK7P58062 85 aa7.79□□□□□ -1.16
CDK5RAP3-232ENST00000584168 RETNLBQ9BQ08 111 aa7.79□□□□□ -1.16
CDK5RAP3-232ENST00000584168 Q8NAQ8 132 aa7.78□□□□□ -1.16
CDK5RAP3-232ENST00000584168 X6R8D5 127 aa7.78□□□□□ -1.16
CDK5RAP3-232ENST00000584168 LINC01558Q9Y6Z2 57 aa7.77□□□□□ -1.16
CDK5RAP3-232ENST00000584168 LINC00476Q8WZB0 136 aa7.77□□□□□ -1.17
CDK5RAP3-232ENST00000584168 Q8NDZ9 215 aa7.76□□□□□ -1.17
CDK5RAP3-232ENST00000584168 KCNQ1DNQ9H478 68 aa7.76□□□□□ -1.17
CDK5RAP3-232ENST00000584168 LINC00959A0A1B0GUT2 108 aa7.75□□□□□ -1.17
CDK5RAP3-232ENST00000584168 COA5Q86WW8 74 aa7.75□□□□□ -1.17
CDK5RAP3-232ENST00000584168 PLAC8Q9NZF1 115 aa7.75□□□□□ -1.17
CDK5RAP3-232ENST00000584168 IGHV4-28A0A0C4DH34 117 aa7.75□□□□□ -1.17
CDK5RAP3-232ENST00000584168 HTN3P15516 51 aa7.75□□□□□ -1.17
CDK5RAP3-232ENST00000584168 SPAG11BQ08648 103 aa7.75□□□□□ -1.17
CDK5RAP3-232ENST00000584168 ASB16-AS1Q495Z4 193 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms