RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 LRP1BQ9NZR2 4599 aa5.25□□□□□ -1.57
ERBB2-216ENST00000584014 A0A0J9YXY3 114 aa5.25□□□□□ -1.57
ERBB2-216ENST00000584014 RPL37AP61513 92 aaKnown RBP5.25□□□□□ -1.57
ERBB2-216ENST00000584014 SRSF9Q13242 221 aaKnown RBP eCLIP5.25□□□□□ -1.57
ERBB2-216ENST00000584014 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
ERBB2-216ENST00000584014 Q8N1X5 172 aa5.25□□□□□ -1.57
ERBB2-216ENST00000584014 NKAPP1Q8N9T2 125 aa5.25□□□□□ -1.57
ERBB2-216ENST00000584014 PYY3Q5JQD4 70 aa5.24□□□□□ -1.57
ERBB2-216ENST00000584014 Q6ZVQ6 151 aa5.24□□□□□ -1.57
ERBB2-216ENST00000584014 PCP2Q8IVA1 136 aa5.24□□□□□ -1.57
ERBB2-216ENST00000584014 MIEN1Q9BRT3 115 aa5.24□□□□□ -1.57
ERBB2-216ENST00000584014 C22orf24Q9Y442 160 aa5.24□□□□□ -1.57
ERBB2-216ENST00000584014 RPL37AP8A6NKH3 93 aa5.23□□□□□ -1.57
ERBB2-216ENST00000584014 C9JAW5 83 aa5.23□□□□□ -1.57
ERBB2-216ENST00000584014 ANAPC13Q9BS18 74 aa5.23□□□□□ -1.57
ERBB2-216ENST00000584014 NCR3O14931 201 aa5.22□□□□□ -1.57
ERBB2-216ENST00000584014 PRR3P79522 188 aaKnown RBP5.22□□□□□ -1.57
ERBB2-216ENST00000584014 JOSD1Q15040 202 aaPredicted RBP5.22□□□□□ -1.57
ERBB2-216ENST00000584014 ADAMTSL4-AS1Q5T5F5 129 aa5.22□□□□□ -1.57
ERBB2-216ENST00000584014 KRTAP7-1Q8IUC3 87 aa5.22□□□□□ -1.57
ERBB2-216ENST00000584014 VAMP8Q9BV40 100 aa5.22□□□□□ -1.57
ERBB2-216ENST00000584014 KRTAP4-5Q9BYR2 181 aa5.22□□□□□ -1.57
ERBB2-216ENST00000584014 KIAA1109Q2LD37 5005 aa5.22□□□□□ -1.57
ERBB2-216ENST00000584014 SPATA45Q537H7 98 aa5.21□□□□□ -1.58
ERBB2-216ENST00000584014 C1orf137Q5JT78 98 aa5.21□□□□□ -1.58
ERBB2-216ENST00000584014 APOBP04114 4563 aaKnown RBP5.21□□□□□ -1.58
ERBB2-216ENST00000584014 IGKV2-28A0A075B6P5 120 aa5.2□□□□□ -1.58
ERBB2-216ENST00000584014 IGKV2D-28P01615 120 aa5.2□□□□□ -1.58
ERBB2-216ENST00000584014 HSD52Q0P140 79 aa5.2□□□□□ -1.58
ERBB2-216ENST00000584014 KRTAP19-1Q8IUB9 90 aa5.2□□□□□ -1.58
ERBB2-216ENST00000584014 LINC00167Q96N53 147 aa5.2□□□□□ -1.58
ERBB2-216ENST00000584014 TP73-AS1Q9UF72 201 aa5.2□□□□□ -1.58
ERBB2-216ENST00000584014 PSORS1C2Q9UIG4 136 aa5.2□□□□□ -1.58
ERBB2-216ENST00000584014 DNAH8Q96JB1 4490 aa5.2□□□□□ -1.58
ERBB2-216ENST00000584014 SRRM2Q9UQ35 2752 aaKnown RBP5.19□□□□□ -1.58
ERBB2-216ENST00000584014 INAFM2P0DMQ5 153 aa5.19□□□□□ -1.58
ERBB2-216ENST00000584014 KRTAP11-1Q8IUC1 163 aa5.19□□□□□ -1.58
ERBB2-216ENST00000584014 Q8NDZ9 215 aa5.19□□□□□ -1.58
ERBB2-216ENST00000584014 PLA2G2DQ9UNK4 145 aa5.19□□□□□ -1.58
ERBB2-216ENST00000584014 HSPG2P98160 4391 aa5.18□□□□□ -1.58
ERBB2-216ENST00000584014 FAM236DA0A1B0GTK5 79 aa5.18□□□□□ -1.58
ERBB2-216ENST00000584014 FAM236CP0DP71 79 aa5.18□□□□□ -1.58
ERBB2-216ENST00000584014 LINC00308Q8TCZ7 52 aa5.18□□□□□ -1.58
ERBB2-216ENST00000584014 A0A1B0GWB2 263 aa5.17□□□□□ -1.58
ERBB2-216ENST00000584014 M0R378 163 aa5.17□□□□□ -1.58
ERBB2-216ENST00000584014 TIMM17BO60830 172 aa5.17□□□□□ -1.58
ERBB2-216ENST00000584014 S100A7L2Q5SY68 101 aa5.17□□□□□ -1.58
ERBB2-216ENST00000584014 SOSTDC1Q6X4U4 206 aa5.17□□□□□ -1.58
ERBB2-216ENST00000584014 NOTCH2NLQ7Z3S9 236 aa5.17□□□□□ -1.58
ERBB2-216ENST00000584014 LITAFQ99732 161 aa5.17□□□□□ -1.58
ERBB2-216ENST00000584014 IGLV5-37A0A075B6J1 123 aa5.16□□□□□ -1.58
ERBB2-216ENST00000584014 COX8AP10176 69 aa5.16□□□□□ -1.58
ERBB2-216ENST00000584014 MUSTN1Q8IVN3 82 aa5.16□□□□□ -1.58
ERBB2-216ENST00000584014 HIST1H4GQ99525 98 aa5.16□□□□□ -1.58
ERBB2-216ENST00000584014 TRBV10-3A0A0K0K1G6 114 aa5.15□□□□□ -1.59
ERBB2-216ENST00000584014 UBE2AP49459 152 aa5.15□□□□□ -1.59
ERBB2-216ENST00000584014 SLC25A34Q6PIV7 304 aa5.15□□□□□ -1.59
ERBB2-216ENST00000584014 COPS9Q8WXC6 57 aa5.15□□□□□ -1.59
ERBB2-216ENST00000584014 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
ERBB2-216ENST00000584014 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
ERBB2-216ENST00000584014 IGLV1-50A0A075B6I6 118 aa5.14□□□□□ -1.59
ERBB2-216ENST00000584014 REG3GQ6UW15 175 aa5.14□□□□□ -1.59
ERBB2-216ENST00000584014 Q6ZVH6 145 aa5.14□□□□□ -1.59
ERBB2-216ENST00000584014 IGLV7-43P04211 117 aa5.13□□□□□ -1.59
ERBB2-216ENST00000584014 IFITM1P13164 125 aa5.13□□□□□ -1.59
ERBB2-216ENST00000584014 PSMB2P49721 201 aa5.13□□□□□ -1.59
ERBB2-216ENST00000584014 KRTAP10-4P60372 401 aaPredicted RBP5.13□□□□□ -1.59
ERBB2-216ENST00000584014 PRLHP81277 87 aa5.13□□□□□ -1.59
ERBB2-216ENST00000584014 Q6Q795 121 aa5.13□□□□□ -1.59
ERBB2-216ENST00000584014 ANKRD29Q8N6D5 301 aa5.13□□□□□ -1.59
ERBB2-216ENST00000584014 PRO1933Q9H354 126 aa5.13□□□□□ -1.59
ERBB2-216ENST00000584014 LOC107984156A0A0G2JMH3 177 aa5.12□□□□□ -1.59
ERBB2-216ENST00000584014 C9orf118A6NHY6 69 aa5.12□□□□□ -1.59
ERBB2-216ENST00000584014 BCE1O60756 84 aa5.12□□□□□ -1.59
ERBB2-216ENST00000584014 ARL17AQ8IVW1 177 aa5.12□□□□□ -1.59
ERBB2-216ENST00000584014 FAT1Q14517 4588 aa5.11□□□□□ -1.59
ERBB2-216ENST00000584014 ABCA13Q86UQ4 5058 aa5.11□□□□□ -1.59
ERBB2-216ENST00000584014 TRBV10-2A0A0K0K1G8 114 aa5.11□□□□□ -1.59
ERBB2-216ENST00000584014 ETDCA0A1B0GVM5 59 aa5.11□□□□□ -1.59
ERBB2-216ENST00000584014 RPL28P46779 137 aaKnown RBP5.11□□□□□ -1.59
ERBB2-216ENST00000584014 SPINK6Q6UWN8 80 aa5.11□□□□□ -1.59
ERBB2-216ENST00000584014 IMUPQ9GZP8 106 aa5.11□□□□□ -1.59
ERBB2-216ENST00000584014 TRAV23DV6A0A075B6W5 121 aa5.1□□□□□ -1.59
ERBB2-216ENST00000584014 DIRC1Q969H9 104 aa5.1□□□□□ -1.59
ERBB2-216ENST00000584014 HIGD2AQ9BW72 106 aa5.1□□□□□ -1.59
ERBB2-216ENST00000584014 ZNF861PO60384 105 aa5.09□□□□□ -1.59
ERBB2-216ENST00000584014 LYRM7Q5U5X0 104 aa5.09□□□□□ -1.59
ERBB2-216ENST00000584014 C2orf91Q6ZV80 131 aa5.09□□□□□ -1.59
ERBB2-216ENST00000584014 LINC00337Q8N6G1 96 aa5.09□□□□□ -1.59
ERBB2-216ENST00000584014 UQCR10Q9UDW1 63 aa5.09□□□□□ -1.59
ERBB2-216ENST00000584014 VPS13BQ7Z7G8 4022 aa5.08□□□□□ -1.6
ERBB2-216ENST00000584014 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
ERBB2-216ENST00000584014 H7C2G1 150 aa5.08□□□□□ -1.6
ERBB2-216ENST00000584014 IGLV6-57P01721 117 aa5.08□□□□□ -1.6
ERBB2-216ENST00000584014 HINT1P49773 126 aaPredicted RBP5.08□□□□□ -1.6
ERBB2-216ENST00000584014 KCNQ1DNQ9H478 68 aa5.08□□□□□ -1.6
ERBB2-216ENST00000584014 HIGD1BQ9P298 99 aa5.08□□□□□ -1.6
ERBB2-216ENST00000584014 TRAV13-2A0A0B4J235 113 aa5.07□□□□□ -1.6
ERBB2-216ENST00000584014 H0Y9J4 135 aa5.07□□□□□ -1.6
ERBB2-216ENST00000584014 ZNF73O43830 326 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms