RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 LINC01546A6NGU7 62 aa5.74□□□□□ -1.49
CASC3-208ENST00000583649 GHRHP01286 108 aa5.74□□□□□ -1.49
CASC3-208ENST00000583649 C1orf195Q5TG92 126 aa5.74□□□□□ -1.49
CASC3-208ENST00000583649 ST20-AS1Q8NBB2 130 aa5.74□□□□□ -1.49
CASC3-208ENST00000583649 SPANXB1Q9NS25 103 aaPredicted RBP5.74□□□□□ -1.49
CASC3-208ENST00000583649 C9JQL5 133 aa5.73□□□□□ -1.49
CASC3-208ENST00000583649 LCE2BO14633 110 aa5.73□□□□□ -1.49
CASC3-208ENST00000583649 TCL1BO95988 128 aa5.73□□□□□ -1.49
CASC3-208ENST00000583649 SPRR1BP22528 89 aa5.73□□□□□ -1.49
CASC3-208ENST00000583649 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
CASC3-208ENST00000583649 ZNF73O43830 326 aaPredicted RBP5.72□□□□□ -1.49
CASC3-208ENST00000583649 AKR1D1P51857 326 aa5.72□□□□□ -1.49
CASC3-208ENST00000583649 BAGE3Q86Y29 109 aa5.72□□□□□ -1.49
CASC3-208ENST00000583649 DHRS4-AS1Q9P1J3 65 aa5.72□□□□□ -1.49
CASC3-208ENST00000583649 MYMXA0A1B0GTQ4 84 aa5.71□□□□□ -1.5
CASC3-208ENST00000583649 C11orf86A6NJI1 115 aa5.71□□□□□ -1.5
CASC3-208ENST00000583649 SMIM29Q86T20 159 aa5.71□□□□□ -1.5
CASC3-208ENST00000583649 MT2AP02795 61 aa5.7□□□□□ -1.5
CASC3-208ENST00000583649 TAL2Q16559 108 aa5.7□□□□□ -1.5
CASC3-208ENST00000583649 C6orf99Q4VX62 202 aa5.7□□□□□ -1.5
CASC3-208ENST00000583649 HBDP02042 147 aa5.69□□□□□ -1.5
CASC3-208ENST00000583649 IFITM2Q01629 132 aa5.69□□□□□ -1.5
CASC3-208ENST00000583649 Q75L30 129 aa5.69□□□□□ -1.5
CASC3-208ENST00000583649 LOC107984156A0A0G2JMH3 177 aa5.68□□□□□ -1.5
CASC3-208ENST00000583649 TMEM223A0PJW6 202 aa5.68□□□□□ -1.5
CASC3-208ENST00000583649 NDUFC2O95298 119 aa5.68□□□□□ -1.5
CASC3-208ENST00000583649 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
CASC3-208ENST00000583649 ARL17AQ8IVW1 177 aa5.68□□□□□ -1.5
CASC3-208ENST00000583649 CHTOPQ9Y3Y2 248 aaKnown RBP5.68□□□□□ -1.5
CASC3-208ENST00000583649 FAM236DA0A1B0GTK5 79 aa5.67□□□□□ -1.5
CASC3-208ENST00000583649 FAM236CP0DP71 79 aa5.67□□□□□ -1.5
CASC3-208ENST00000583649 SMCPP49901 116 aaPredicted RBP5.67□□□□□ -1.5
CASC3-208ENST00000583649 Q1RN00 199 aa5.67□□□□□ -1.5
CASC3-208ENST00000583649 PCP2Q8IVA1 136 aa5.67□□□□□ -1.5
CASC3-208ENST00000583649 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
CASC3-208ENST00000583649 TEX49A0A1B0GTD5 131 aa5.65□□□□□ -1.5
CASC3-208ENST00000583649 MT1FP04733 61 aa5.65□□□□□ -1.5
CASC3-208ENST00000583649 DEFB105AQ8NG35 78 aa5.65□□□□□ -1.5
CASC3-208ENST00000583649 COX19Q49B96 90 aa5.64□□□□□ -1.51
CASC3-208ENST00000583649 LINC00614P0C842 121 aa5.63□□□□□ -1.51
CASC3-208ENST00000583649 RHEBQ15382 184 aa5.63□□□□□ -1.51
CASC3-208ENST00000583649 OBSCN-AS1Q96MR7 158 aa5.63□□□□□ -1.51
CASC3-208ENST00000583649 NEBP20929 6669 aa5.63□□□□□ -1.51
CASC3-208ENST00000583649 EIF4EBP3O60516 100 aaPredicted RBP5.62□□□□□ -1.51
CASC3-208ENST00000583649 LGALS3P17931 250 aaKnown RBP5.62□□□□□ -1.51
CASC3-208ENST00000583649 S100PP25815 95 aa5.62□□□□□ -1.51
CASC3-208ENST00000583649 C20orf166-AS1Q96NR2 134 aa5.62□□□□□ -1.51
CASC3-208ENST00000583649 FABP9Q0Z7S8 132 aa5.61□□□□□ -1.51
CASC3-208ENST00000583649 KRTAP20-1Q3LI63 56 aa5.61□□□□□ -1.51
CASC3-208ENST00000583649 TRAV12-1A0A0B4J245 112 aa5.6□□□□□ -1.51
CASC3-208ENST00000583649 C21orf62-AS1Q17RA5 79 aa5.6□□□□□ -1.51
CASC3-208ENST00000583649 OR13C6PQ8NH95 151 aa5.6□□□□□ -1.51
CASC3-208ENST00000583649 SEC11CQ9BY50 192 aa5.6□□□□□ -1.51
CASC3-208ENST00000583649 RBM12B-AS1Q9P1G2 102 aa5.6□□□□□ -1.51
CASC3-208ENST00000583649 A0A096LNJ9 63 aa5.58□□□□□ -1.52
CASC3-208ENST00000583649 COX7BP24311 80 aa5.58□□□□□ -1.52
CASC3-208ENST00000583649 Q96NJ1 140 aa5.58□□□□□ -1.52
CASC3-208ENST00000583649 NMUP48645 174 aa5.57□□□□□ -1.52
CASC3-208ENST00000583649 PMCHL1Q16048 86 aa5.57□□□□□ -1.52
CASC3-208ENST00000583649 F8WEM9 126 aa5.56□□□□□ -1.52
CASC3-208ENST00000583649 ELOF1P60002 83 aaKnown RBP5.56□□□□□ -1.52
CASC3-208ENST00000583649 LEPROTO15243 131 aa5.55□□□□□ -1.52
CASC3-208ENST00000583649 HERVK_113P61574 105 aa5.55□□□□□ -1.52
CASC3-208ENST00000583649 IFI27L1Q96BM0 104 aa5.55□□□□□ -1.52
CASC3-208ENST00000583649 MTURNQ8N3F0 131 aa5.53□□□□□ -1.52
CASC3-208ENST00000583649 SPANXDQ9BXN6 97 aa5.53□□□□□ -1.52
CASC3-208ENST00000583649 SPANXCQ9NY87 97 aa5.53□□□□□ -1.52
CASC3-208ENST00000583649 ZNF815PA8K554 130 aa5.52□□□□□ -1.53
CASC3-208ENST00000583649 J3QQQ9 107 aa5.52□□□□□ -1.53
CASC3-208ENST00000583649 NPC2P61916 151 aa5.52□□□□□ -1.53
CASC3-208ENST00000583649 IGFL1Q6UW32 110 aa5.52□□□□□ -1.53
CASC3-208ENST00000583649 C18orf32Q8TCD1 76 aa5.52□□□□□ -1.53
CASC3-208ENST00000583649 A0A0G2JQZ4 141 aa5.51□□□□□ -1.53
CASC3-208ENST00000583649 NHP2Q9NX24 153 aaKnown RBP5.51□□□□□ -1.53
CASC3-208ENST00000583649 IGLV5-48A0A075B6I7 105 aa5.5□□□□□ -1.53
CASC3-208ENST00000583649 TRBV7-6A0A0J9YX20 115 aa5.5□□□□□ -1.53
CASC3-208ENST00000583649 Q6ZVH6 145 aa5.5□□□□□ -1.53
CASC3-208ENST00000583649 LINC00518Q8N0U6 118 aa5.5□□□□□ -1.53
CASC3-208ENST00000583649 RPS10P5Q9NQ39 176 aa5.5□□□□□ -1.53
CASC3-208ENST00000583649 A0A1B0GWB2 263 aa5.49□□□□□ -1.53
CASC3-208ENST00000583649 PLNP26678 52 aa5.49□□□□□ -1.53
CASC3-208ENST00000583649 Q6JHZ5 121 aa5.49□□□□□ -1.53
CASC3-208ENST00000583649 URB1-AS1Q96HZ7 61 aa5.49□□□□□ -1.53
CASC3-208ENST00000583649 TRAPPC1Q9Y5R8 145 aa5.49□□□□□ -1.53
CASC3-208ENST00000583649 TRBV7-7A0A0K0K1E9 115 aa5.48□□□□□ -1.53
CASC3-208ENST00000583649 A4D1N5 150 aa5.48□□□□□ -1.53
CASC3-208ENST00000583649 LST1O00453 97 aa5.48□□□□□ -1.53
CASC3-208ENST00000583649 TSPEAR-AS2P59090 65 aa5.48□□□□□ -1.53
CASC3-208ENST00000583649 A8MUU9 505 aa5.47□□□□□ -1.53
CASC3-208ENST00000583649 H0Y8G0 127 aa5.47□□□□□ -1.53
CASC3-208ENST00000583649 SOSTDC1Q6X4U4 206 aa5.47□□□□□ -1.53
CASC3-208ENST00000583649 CHCHD1Q96BP2 118 aaKnown RBP5.47□□□□□ -1.53
CASC3-208ENST00000583649 CLEC2BQ92478 149 aa5.46□□□□□ -1.54
CASC3-208ENST00000583649 A8MWP4 228 aa5.45□□□□□ -1.54
CASC3-208ENST00000583649 TRAV13-2A0A0B4J235 113 aa5.44□□□□□ -1.54
CASC3-208ENST00000583649 A0A0J9YXY3 114 aa5.44□□□□□ -1.54
CASC3-208ENST00000583649 ADAMTSL4-AS1Q5T5F5 129 aa5.44□□□□□ -1.54
CASC3-208ENST00000583649 LINC00308Q8TCZ7 52 aa5.44□□□□□ -1.54
CASC3-208ENST00000583649 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
CASC3-208ENST00000583649 ANKRD39Q53RE8 183 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms