RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 BCE1O60756 84 aa3□□□□□ -1.93
PTPRM-215ENST00000583289 C6orf99Q4VX62 202 aa3□□□□□ -1.93
PTPRM-215ENST00000583289 DIRC1Q969H9 104 aa3□□□□□ -1.93
PTPRM-215ENST00000583289 DSCR8Q96T75 97 aa3□□□□□ -1.93
PTPRM-215ENST00000583289 UBL5Q9BZL1 73 aa3□□□□□ -1.93
PTPRM-215ENST00000583289 C22orf24Q9Y442 160 aa3□□□□□ -1.93
PTPRM-215ENST00000583289 GCN1Q92616 2671 aaKnown RBP2.99□□□□□ -1.93
PTPRM-215ENST00000583289 VPS13CQ709C8 3753 aa2.99□□□□□ -1.93
PTPRM-215ENST00000583289 TRAV23DV6A0A075B6W5 121 aa2.99□□□□□ -1.93
PTPRM-215ENST00000583289 KRTAP16-1A8MUX0 517 aa2.99□□□□□ -1.93
PTPRM-215ENST00000583289 ZNF73O43830 326 aaPredicted RBP2.99□□□□□ -1.93
PTPRM-215ENST00000583289 DNAH10OSP0CZ25 163 aa2.99□□□□□ -1.93
PTPRM-215ENST00000583289 COX7BP24311 80 aa2.99□□□□□ -1.93
PTPRM-215ENST00000583289 SMIM20Q8N5G0 67 aa2.99□□□□□ -1.93
PTPRM-215ENST00000583289 C14orf132Q9NPU4 83 aa2.99□□□□□ -1.93
PTPRM-215ENST00000583289 LAMTOR3Q9UHA4 124 aa2.99□□□□□ -1.93
PTPRM-215ENST00000583289 ATRQ13535 2644 aa2.98□□□□□ -1.93
PTPRM-215ENST00000583289 UQCRQO14949 82 aa2.98□□□□□ -1.93
PTPRM-215ENST00000583289 TLX1NBP0CAT3 122 aa2.98□□□□□ -1.93
PTPRM-215ENST00000583289 PRR3P79522 188 aaKnown RBP2.98□□□□□ -1.93
PTPRM-215ENST00000583289 RPL18AQ02543 176 aaKnown RBP2.98□□□□□ -1.93
PTPRM-215ENST00000583289 SYCNQ0VAF6 134 aa2.98□□□□□ -1.93
PTPRM-215ENST00000583289 ESRGQ1W209 222 aa2.98□□□□□ -1.93
PTPRM-215ENST00000583289 C6orf223Q8N319 242 aa2.98□□□□□ -1.93
PTPRM-215ENST00000583289 C6orf48Q9UBA6 75 aa2.98□□□□□ -1.93
PTPRM-215ENST00000583289 PKIGQ9Y2B9 76 aa2.98□□□□□ -1.93
PTPRM-215ENST00000583289 HECTD1Q9ULT8 2610 aa2.97□□□□□ -1.93
PTPRM-215ENST00000583289 FAM236AA0A1B0GUQ0 79 aa2.97□□□□□ -1.93
PTPRM-215ENST00000583289 FAM236BA0A1B0GV22 79 aa2.97□□□□□ -1.93
PTPRM-215ENST00000583289 NCR3O14931 201 aa2.97□□□□□ -1.93
PTPRM-215ENST00000583289 ELOF1P60002 83 aaKnown RBP2.97□□□□□ -1.93
PTPRM-215ENST00000583289 C9orf116Q5BN46 136 aaPredicted RBP2.97□□□□□ -1.93
PTPRM-215ENST00000583289 NKAPP1Q8N9T2 125 aa2.97□□□□□ -1.93
PTPRM-215ENST00000583289 LINC00526Q96FQ7 95 aa2.97□□□□□ -1.93
PTPRM-215ENST00000583289 LINC00846Q9NV44 126 aa2.97□□□□□ -1.93
PTPRM-215ENST00000583289 DHRS4-AS1Q9P1J3 65 aa2.97□□□□□ -1.93
PTPRM-215ENST00000583289 NBEAL2Q6ZNJ1 2754 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 ZFHX3Q15911 3703 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 IGKV2D-24A0A075B6R9 120 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 COX7CP15954 63 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 DSCR10P59022 87 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 HIST1H4AP62805 103 aaKnown RBP2.96□□□□□ -1.94
PTPRM-215ENST00000583289 CXCL6P80162 114 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 KRTAP26-1Q6PEX3 210 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 WFDC10BQ8IUB3 73 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 C3orf22Q8N5N4 141 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 MRAPQ8TCY5 172 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 KCNQ1DNQ9H478 68 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 HIVEP1P15822 2718 aa2.96□□□□□ -1.94
PTPRM-215ENST00000583289 NIPBLQ6KC79 2804 aaeCLIP2.95□□□□□ -1.94
PTPRM-215ENST00000583289 A0A087X002 238 aa2.95□□□□□ -1.94
PTPRM-215ENST00000583289 Q6ZQT0 140 aa2.95□□□□□ -1.94
PTPRM-215ENST00000583289 Q6ZQY7 126 aa2.95□□□□□ -1.94
PTPRM-215ENST00000583289 Q6ZRU5 148 aa2.95□□□□□ -1.94
PTPRM-215ENST00000583289 SERP2Q8N6R1 65 aa2.95□□□□□ -1.94
PTPRM-215ENST00000583289 SMCR5Q8TEV8 140 aa2.95□□□□□ -1.94
PTPRM-215ENST00000583289 TM2D3Q9BRN9 247 aa2.95□□□□□ -1.94
PTPRM-215ENST00000583289 UPK3BQ9BT76 320 aa2.95□□□□□ -1.94
PTPRM-215ENST00000583289 XAGE1AQ9HD64 81 aa2.95□□□□□ -1.94
PTPRM-215ENST00000583289 CSMD2Q7Z408 3487 aa2.95□□□□□ -1.94
PTPRM-215ENST00000583289 LOC107984640A0A0U1RRK4 108 aa2.94□□□□□ -1.94
PTPRM-215ENST00000583289 CRYGAP11844 174 aa2.94□□□□□ -1.94
PTPRM-215ENST00000583289 HIGD2BQ4VC39 106 aa2.94□□□□□ -1.94
PTPRM-215ENST00000583289 C9orf153Q5TBE3 101 aa2.94□□□□□ -1.94
PTPRM-215ENST00000583289 C15orf56Q8N910 161 aa2.94□□□□□ -1.94
PTPRM-215ENST00000583289 OTOGQ6ZRI0 2925 aa2.93□□□□□ -1.94
PTPRM-215ENST00000583289 IGKV3D-7A0A0C4DH55 119 aa2.93□□□□□ -1.94
PTPRM-215ENST00000583289 TRBV7-4A0A0J9YYF1 115 aa2.93□□□□□ -1.94
PTPRM-215ENST00000583289 CCDC179H3BU77 68 aa2.93□□□□□ -1.94
PTPRM-215ENST00000583289 Q6ZRP5 223 aa2.93□□□□□ -1.94
PTPRM-215ENST00000583289 RETNQ9HD89 108 aa2.93□□□□□ -1.94
PTPRM-215ENST00000583289 F8P00451 2351 aa2.92□□□□□ -1.94
PTPRM-215ENST00000583289 ETDCA0A1B0GVM5 59 aa2.92□□□□□ -1.94
PTPRM-215ENST00000583289 RPL37AP8A6NKH3 93 aa2.92□□□□□ -1.94
PTPRM-215ENST00000583289 RPS28P62857 69 aaKnown RBP2.92□□□□□ -1.94
PTPRM-215ENST00000583289 C9orf129Q5T035 196 aaKnown RBP2.92□□□□□ -1.94
PTPRM-215ENST00000583289 Q8NDZ9 215 aa2.92□□□□□ -1.94
PTPRM-215ENST00000583289 LINC00588Q9Y4M8 146 aa2.92□□□□□ -1.94
PTPRM-215ENST00000583289 TENM1Q9UKZ4 2725 aa2.92□□□□□ -1.94
PTPRM-215ENST00000583289 VWFP04275 2813 aa2.92□□□□□ -1.94
PTPRM-215ENST00000583289 IGLV1-50A0A075B6I6 118 aa2.91□□□□□ -1.94
PTPRM-215ENST00000583289 IGLV5-48A0A075B6I7 105 aa2.91□□□□□ -1.94
PTPRM-215ENST00000583289 TRAV7A0A075B6U4 112 aa2.91□□□□□ -1.94
PTPRM-215ENST00000583289 SPRR1AP35321 89 aa2.91□□□□□ -1.94
PTPRM-215ENST00000583289 FUSP35637 526 aaKnown RBP eCLIP2.91□□□□□ -1.94
PTPRM-215ENST00000583289 HAMPP81172 84 aa2.91□□□□□ -1.94
PTPRM-215ENST00000583289 NREPQ16612 68 aa2.91□□□□□ -1.94
PTPRM-215ENST00000583289 Q6ZRX8 168 aa2.91□□□□□ -1.94
PTPRM-215ENST00000583289 Q6ZVQ6 151 aa2.91□□□□□ -1.94
PTPRM-215ENST00000583289 LINC00474Q9P2X8 69 aa2.91□□□□□ -1.94
PTPRM-215ENST00000583289 AKAP9Q99996 3911 aa2.91□□□□□ -1.94
PTPRM-215ENST00000583289 ZNF469Q96JG9 3925 aaPredicted RBP2.9□□□□□ -1.94
PTPRM-215ENST00000583289 NDUFC1O43677 76 aa2.9□□□□□ -1.95
PTPRM-215ENST00000583289 TMEM258P61165 79 aa2.9□□□□□ -1.95
PTPRM-215ENST00000583289 CNBPP62633 177 aaKnown RBP2.9□□□□□ -1.95
PTPRM-215ENST00000583289 MRPL55Q7Z7F7 128 aaKnown RBP2.9□□□□□ -1.95
PTPRM-215ENST00000583289 C7orf33Q8WU49 177 aa2.9□□□□□ -1.95
PTPRM-215ENST00000583289 IGLV9-49A0A0B4J1Y8 123 aa2.89□□□□□ -1.95
PTPRM-215ENST00000583289 C16orf90A8MZG2 172 aa2.89□□□□□ -1.95
PTPRM-215ENST00000583289 F8WEM9 126 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms