RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 HIGD2BQ4VC39 106 aa7.09□□□□□ -1.27
TOP3A-214ENST00000582981 IGHV4-28A0A0C4DH34 117 aa7.08□□□□□ -1.28
TOP3A-214ENST00000582981 SPAG11BQ08648 103 aa7.08□□□□□ -1.28
TOP3A-214ENST00000582981 CD164L2Q6UWJ8 174 aa7.07□□□□□ -1.28
TOP3A-214ENST00000582981 CYSRT1A8MQ03 144 aa7.06□□□□□ -1.28
TOP3A-214ENST00000582981 PDE6GP18545 87 aa7.06□□□□□ -1.28
TOP3A-214ENST00000582981 Q6ZTC4 211 aa7.06□□□□□ -1.28
TOP3A-214ENST00000582981 FAM30AQ9NZY2 134 aa7.06□□□□□ -1.28
TOP3A-214ENST00000582981 C3orf84H3BNL1 204 aa7.06□□□□□ -1.28
TOP3A-214ENST00000582981 PRR15Q8IV56 129 aa7.05□□□□□ -1.28
TOP3A-214ENST00000582981 A0A1B0GUV1 79 aa7.05□□□□□ -1.28
TOP3A-214ENST00000582981 CMC4P56277 68 aaPredicted RBP7.04□□□□□ -1.28
TOP3A-214ENST00000582981 Q6ZRP5 223 aa7.03□□□□□ -1.28
TOP3A-214ENST00000582981 CSMD3Q7Z407 3707 aa7.03□□□□□ -1.28
TOP3A-214ENST00000582981 C9orf66Q5T8R8 295 aa7.03□□□□□ -1.28
TOP3A-214ENST00000582981 OCR1Q9BZK8 76 aa7.03□□□□□ -1.28
TOP3A-214ENST00000582981 C1orf64Q8NEQ6 169 aa7.02□□□□□ -1.29
TOP3A-214ENST00000582981 IGKV4-1P06312 121 aa7.02□□□□□ -1.29
TOP3A-214ENST00000582981 A8MU10 97 aa7.01□□□□□ -1.29
TOP3A-214ENST00000582981 INAFM1C9JVW0 142 aa7.01□□□□□ -1.29
TOP3A-214ENST00000582981 ERC2-IT1O76042 136 aa7.01□□□□□ -1.29
TOP3A-214ENST00000582981 LINC00612Q8N6U2 182 aa7.01□□□□□ -1.29
TOP3A-214ENST00000582981 hDV103S1A0JD37 113 aa7.01□□□□□ -1.29
TOP3A-214ENST00000582981 DIRC1Q969H9 104 aa7.01□□□□□ -1.29
TOP3A-214ENST00000582981 SMIM29Q86T20 159 aa7□□□□□ -1.29
TOP3A-214ENST00000582981 WFDC10BQ8IUB3 73 aa7□□□□□ -1.29
TOP3A-214ENST00000582981 ANK2Q01484 3957 aa7□□□□□ -1.29
TOP3A-214ENST00000582981 Q6ZRU5 148 aa7□□□□□ -1.29
TOP3A-214ENST00000582981 C6orf48Q9UBA6 75 aa7□□□□□ -1.29
TOP3A-214ENST00000582981 COX17Q14061 63 aa6.99□□□□□ -1.29
TOP3A-214ENST00000582981 COX7BP24311 80 aa6.99□□□□□ -1.29
TOP3A-214ENST00000582981 TRAV22A0A0B4J277 110 aa6.99□□□□□ -1.29
TOP3A-214ENST00000582981 A8MUN3 132 aa6.99□□□□□ -1.29
TOP3A-214ENST00000582981 DEFB105AQ8NG35 78 aa6.98□□□□□ -1.29
TOP3A-214ENST00000582981 SPTSSBQ8NFR3 76 aa6.97□□□□□ -1.29
TOP3A-214ENST00000582981 Q8NAQ8 132 aa6.97□□□□□ -1.29
TOP3A-214ENST00000582981 MGAM2Q2M2H8 2515 aa6.97□□□□□ -1.29
TOP3A-214ENST00000582981 LYRM9A8MSI8 78 aa6.97□□□□□ -1.29
TOP3A-214ENST00000582981 ZNF73O43830 326 aaPredicted RBP6.97□□□□□ -1.29
TOP3A-214ENST00000582981 MRPL55Q7Z7F7 128 aaKnown RBP6.97□□□□□ -1.29
TOP3A-214ENST00000582981 CAMK2N2Q96S95 79 aa6.96□□□□□ -1.29
TOP3A-214ENST00000582981 IGLV6-57P01721 117 aa6.96□□□□□ -1.3
TOP3A-214ENST00000582981 CD164Q04900 197 aa6.96□□□□□ -1.3
TOP3A-214ENST00000582981 Q1T7F1 81 aa6.95□□□□□ -1.3
TOP3A-214ENST00000582981 IGHV4-30-4P0DP06 118 aa6.95□□□□□ -1.3
TOP3A-214ENST00000582981 OXLD1Q5BKU9 147 aa6.95□□□□□ -1.3
TOP3A-214ENST00000582981 SPART-AS1P0CW21 52 aa6.94□□□□□ -1.3
TOP3A-214ENST00000582981 SRRM2Q9UQ35 2752 aaKnown RBP6.94□□□□□ -1.3
TOP3A-214ENST00000582981 LELP1Q5T871 98 aa6.93□□□□□ -1.3
TOP3A-214ENST00000582981 APOC4P55056 127 aa6.92□□□□□ -1.3
TOP3A-214ENST00000582981 H3BQ85 93 aa6.92□□□□□ -1.3
TOP3A-214ENST00000582981 IGKV2D-24A0A075B6R9 120 aa6.91□□□□□ -1.3
TOP3A-214ENST00000582981 CHKB-CPT1BH3BT56 60 aa6.91□□□□□ -1.3
TOP3A-214ENST00000582981 TENM2Q9NT68 2774 aa6.91□□□□□ -1.3
TOP3A-214ENST00000582981 SYCNQ0VAF6 134 aa6.91□□□□□ -1.3
TOP3A-214ENST00000582981 KPRPQ5T749 579 aaPredicted RBP6.91□□□□□ -1.3
TOP3A-214ENST00000582981 A0A0J9YWU9 116 aa6.9□□□□□ -1.31
TOP3A-214ENST00000582981 RPL37AP8A6NKH3 93 aa6.89□□□□□ -1.31
TOP3A-214ENST00000582981 ELOF1P60002 83 aaKnown RBP6.89□□□□□ -1.31
TOP3A-214ENST00000582981 PSCAO43653 123 aa6.89□□□□□ -1.31
TOP3A-214ENST00000582981 DEFB116Q30KQ4 102 aa6.89□□□□□ -1.31
TOP3A-214ENST00000582981 PRR34Q9NV39 138 aa6.89□□□□□ -1.31
TOP3A-214ENST00000582981 STAB2Q8WWQ8 2551 aa6.89□□□□□ -1.31
TOP3A-214ENST00000582981 VPREB1P12018 145 aa6.88□□□□□ -1.31
TOP3A-214ENST00000582981 ST20-AS1Q8NBB2 130 aa6.88□□□□□ -1.31
TOP3A-214ENST00000582981 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.88□□□□□ -1.31
TOP3A-214ENST00000582981 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
TOP3A-214ENST00000582981 A0A0G2JQZ4 141 aa6.87□□□□□ -1.31
TOP3A-214ENST00000582981 A0A1W2PNN7 141 aa6.87□□□□□ -1.31
TOP3A-214ENST00000582981 C15orf56Q8N910 161 aa6.87□□□□□ -1.31
TOP3A-214ENST00000582981 ETDCA0A1B0GVM5 59 aa6.86□□□□□ -1.31
TOP3A-214ENST00000582981 FAM168BA1KXE4 195 aa6.86□□□□□ -1.31
TOP3A-214ENST00000582981 UBE2BP63146 152 aa6.86□□□□□ -1.31
TOP3A-214ENST00000582981 SERTAD4-AS1Q5TG53 156 aa6.86□□□□□ -1.31
TOP3A-214ENST00000582981 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
TOP3A-214ENST00000582981 COL7A1Q02388 2944 aa6.85□□□□□ -1.31
TOP3A-214ENST00000582981 Q5VV11 94 aa6.85□□□□□ -1.31
TOP3A-214ENST00000582981 CASC10Q5T4H9 136 aa6.85□□□□□ -1.31
TOP3A-214ENST00000582981 K7EQZ3 153 aa6.84□□□□□ -1.31
TOP3A-214ENST00000582981 KTN1-AS1Q86SY8 53 aa6.84□□□□□ -1.31
TOP3A-214ENST00000582981 C16orf90A8MZG2 172 aa6.83□□□□□ -1.32
TOP3A-214ENST00000582981 HCG22E2RYF7 251 aa6.83□□□□□ -1.32
TOP3A-214ENST00000582981 WFDC13Q8IUB5 93 aa6.83□□□□□ -1.32
TOP3A-214ENST00000582981 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
TOP3A-214ENST00000582981 LYSTQ99698 3801 aa6.83□□□□□ -1.32
TOP3A-214ENST00000582981 A6NED7 52 aa6.82□□□□□ -1.32
TOP3A-214ENST00000582981 UBE2AP49459 152 aa6.82□□□□□ -1.32
TOP3A-214ENST00000582981 DNAH10Q8IVF4 4471 aa6.82□□□□□ -1.32
TOP3A-214ENST00000582981 M0R378 163 aa6.82□□□□□ -1.32
TOP3A-214ENST00000582981 KRTAP10-11P60412 298 aa6.82□□□□□ -1.32
TOP3A-214ENST00000582981 NKAPP1Q8N9T2 125 aa6.82□□□□□ -1.32
TOP3A-214ENST00000582981 LINC00208Q96KT6 92 aa6.82□□□□□ -1.32
TOP3A-214ENST00000582981 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
TOP3A-214ENST00000582981 KRTAP26-1Q6PEX3 210 aa6.81□□□□□ -1.32
TOP3A-214ENST00000582981 ZCCHC13Q8WW36 166 aaKnown RBP6.81□□□□□ -1.32
TOP3A-214ENST00000582981 B9D2Q9BPU9 175 aa6.81□□□□□ -1.32
TOP3A-214ENST00000582981 C7orf33Q8WU49 177 aa6.8□□□□□ -1.32
TOP3A-214ENST00000582981 GVQW2A0A096LPI5 108 aaPredicted RBP6.8□□□□□ -1.32
TOP3A-214ENST00000582981 A0A1W2PNM2 257 aa6.8□□□□□ -1.32
TOP3A-214ENST00000582981 EGFEM1PQ0D2K5 195 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms