RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 HIST1H2BDP58876 126 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 RPS29P62273 56 aaKnown RBP12.71□□□□□ -0.37
CASC3-207ENST00000581849 HIST1H2BCP62807 126 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 HIST2H2BEQ16778 126 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.71□□□□□ -0.37
CASC3-207ENST00000581849 ADAMTSL4-AS1Q5T5F5 129 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 SSBP3-AS1Q7Z2R9 100 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 HIST1H2BHQ93079 126 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 HIST1H2BNQ99877 126 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 HIST1H2BMQ99879 126 aa12.71□□□□□ -0.37
CASC3-207ENST00000581849 ZNF73O43830 326 aaPredicted RBP12.68□□□□□ -0.38
CASC3-207ENST00000581849 TIMM17BO60830 172 aa12.68□□□□□ -0.38
CASC3-207ENST00000581849 LINC01545Q5VT33 79 aa12.68□□□□□ -0.38
CASC3-207ENST00000581849 C5orf52A6NGY3 159 aa12.67□□□□□ -0.38
CASC3-207ENST00000581849 EIF4EBP3O60516 100 aaPredicted RBP12.67□□□□□ -0.38
CASC3-207ENST00000581849 PET117Q6UWS5 81 aa12.67□□□□□ -0.38
CASC3-207ENST00000581849 NPC2P61916 151 aa12.66□□□□□ -0.38
CASC3-207ENST00000581849 MOBPQ13875 183 aa12.66□□□□□ -0.38
CASC3-207ENST00000581849 LITAFQ99732 161 aa12.66□□□□□ -0.38
CASC3-207ENST00000581849 SPANXCQ9NY87 97 aa12.66□□□□□ -0.38
CASC3-207ENST00000581849 IGLV9-49A0A0B4J1Y8 123 aa12.64□□□□□ -0.39
CASC3-207ENST00000581849 HINT1P49773 126 aaPredicted RBP12.64□□□□□ -0.39
CASC3-207ENST00000581849 LINC00308Q8TCZ7 52 aa12.63□□□□□ -0.39
CASC3-207ENST00000581849 KRTAP13-3Q3SY46 172 aa12.62□□□□□ -0.39
CASC3-207ENST00000581849 FAT4Q6V0I7 4981 aa12.62□□□□□ -0.39
CASC3-207ENST00000581849 ZNF815PA8K554 130 aa12.59□□□□□ -0.39
CASC3-207ENST00000581849 COA6Q5JTJ3 125 aaKnown RBP12.59□□□□□ -0.39
CASC3-207ENST00000581849 Q8N377 158 aa12.59□□□□□ -0.39
CASC3-207ENST00000581849 SPANXDQ9BXN6 97 aa12.59□□□□□ -0.39
CASC3-207ENST00000581849 SLC25A20O43772 301 aa12.58□□□□□ -0.4
CASC3-207ENST00000581849 C3orf79P0CE67 100 aa12.56□□□□□ -0.4
CASC3-207ENST00000581849 LINC00518Q8N0U6 118 aa12.56□□□□□ -0.4
CASC3-207ENST00000581849 OR13C6PQ8NH95 151 aa12.56□□□□□ -0.4
CASC3-207ENST00000581849 SPRR1BP22528 89 aa12.55□□□□□ -0.4
CASC3-207ENST00000581849 LCE2AQ5TA79 106 aaPredicted RBP12.55□□□□□ -0.4
CASC3-207ENST00000581849 C9orf153Q5TBE3 101 aa12.55□□□□□ -0.4
CASC3-207ENST00000581849 DHRS4-AS1Q9P1J3 65 aa12.55□□□□□ -0.4
CASC3-207ENST00000581849 ST20-AS1Q8NBB2 130 aa12.54□□□□□ -0.4
CASC3-207ENST00000581849 SLC25A34Q6PIV7 304 aa12.53□□□□□ -0.4
CASC3-207ENST00000581849 ASB16-AS1Q495Z4 193 aa12.52□□□□□ -0.41
CASC3-207ENST00000581849 TTTY13Q9BZ97 58 aa12.51□□□□□ -0.41
CASC3-207ENST00000581849 C20orf202A1L168 122 aa12.5□□□□□ -0.41
CASC3-207ENST00000581849 COPS9Q8WXC6 57 aa12.5□□□□□ -0.41
CASC3-207ENST00000581849 ELOF1P60002 83 aaKnown RBP12.49□□□□□ -0.41
CASC3-207ENST00000581849 KRTDAPP60985 99 aa12.49□□□□□ -0.41
CASC3-207ENST00000581849 AKR1D1P51857 326 aa12.48□□□□□ -0.41
CASC3-207ENST00000581849 COX7BP24311 80 aa12.47□□□□□ -0.41
CASC3-207ENST00000581849 SCGB1D4Q6XE38 83 aa12.47□□□□□ -0.41
CASC3-207ENST00000581849 TRBV7-6A0A0J9YX20 115 aa12.46□□□□□ -0.41
CASC3-207ENST00000581849 SEC61BP60468 96 aaKnown RBP12.46□□□□□ -0.41
CASC3-207ENST00000581849 C6orf99Q4VX62 202 aa12.46□□□□□ -0.41
CASC3-207ENST00000581849 Q6ZVH6 145 aa12.46□□□□□ -0.41
CASC3-207ENST00000581849 IFITM1P13164 125 aa12.45□□□□□ -0.42
CASC3-207ENST00000581849 LAMTOR3Q9UHA4 124 aa12.45□□□□□ -0.42
CASC3-207ENST00000581849 ANKRD39Q53RE8 183 aa12.43□□□□□ -0.42
CASC3-207ENST00000581849 LIMD2Q9BT23 127 aa12.43□□□□□ -0.42
CASC3-207ENST00000581849 XP32Q5T750 250 aa12.4□□□□□ -0.42
CASC3-207ENST00000581849 A0A1B0GWB2 263 aa12.39□□□□□ -0.43
CASC3-207ENST00000581849 SNRPEP62304 92 aaKnown RBP12.38□□□□□ -0.43
CASC3-207ENST00000581849 TAL2Q16559 108 aa12.38□□□□□ -0.43
CASC3-207ENST00000581849 TEX49A0A1B0GTD5 131 aa12.37□□□□□ -0.43
CASC3-207ENST00000581849 CD164Q04900 197 aa12.37□□□□□ -0.43
CASC3-207ENST00000581849 A4D1N5 150 aa12.35□□□□□ -0.43
CASC3-207ENST00000581849 ATOH7Q8N100 152 aa12.35□□□□□ -0.43
CASC3-207ENST00000581849 A6NDN8 102 aa12.34□□□□□ -0.43
CASC3-207ENST00000581849 PCP2Q8IVA1 136 aa12.34□□□□□ -0.43
CASC3-207ENST00000581849 PRO1933Q9H354 126 aa12.34□□□□□ -0.43
CASC3-207ENST00000581849 IGLV5-48A0A075B6I7 105 aa12.33□□□□□ -0.44
CASC3-207ENST00000581849 MUSTN1Q8IVN3 82 aa12.33□□□□□ -0.44
CASC3-207ENST00000581849 TRAV13-2A0A0B4J235 113 aa12.31□□□□□ -0.44
CASC3-207ENST00000581849 Q1RN00 199 aa12.31□□□□□ -0.44
CASC3-207ENST00000581849 DEFB105AQ8NG35 78 aa12.31□□□□□ -0.44
CASC3-207ENST00000581849 KRTAP9-2Q9BYQ4 174 aa12.31□□□□□ -0.44
CASC3-207ENST00000581849 HRCT1Q6UXD1 115 aa12.3□□□□□ -0.44
CASC3-207ENST00000581849 KRTAP4-1Q9BYQ7 146 aa12.3□□□□□ -0.44
CASC3-207ENST00000581849 NHP2Q9NX24 153 aaKnown RBP12.3□□□□□ -0.44
CASC3-207ENST00000581849 Q5XG85 94 aa12.29□□□□□ -0.44
CASC3-207ENST00000581849 SMIM29Q86T20 159 aa12.29□□□□□ -0.44
CASC3-207ENST00000581849 LINC01547P58512 204 aaPredicted RBP12.28□□□□□ -0.44
CASC3-207ENST00000581849 H7C2G1 150 aa12.26□□□□□ -0.45
CASC3-207ENST00000581849 S100A1P23297 94 aa12.25□□□□□ -0.45
CASC3-207ENST00000581849 HIST3H2BBQ8N257 126 aa12.24□□□□□ -0.45
CASC3-207ENST00000581849 SMIM11BQ8TCY0 68 aa12.24□□□□□ -0.45
CASC3-207ENST00000581849 HIST1H2BLQ99880 126 aa12.22□□□□□ -0.45
CASC3-207ENST00000581849 HSBP1L1C9JCN9 74 aa12.21□□□□□ -0.45
CASC3-207ENST00000581849 S100A2P29034 98 aa12.21□□□□□ -0.45
CASC3-207ENST00000581849 VAMP3Q15836 100 aa12.19□□□□□ -0.46
CASC3-207ENST00000581849 C9orf92A6NGG3 77 aa12.15□□□□□ -0.46
CASC3-207ENST00000581849 C1orf195Q5TG92 126 aa12.14□□□□□ -0.47
CASC3-207ENST00000581849 LINC00575Q6W349 94 aa12.14□□□□□ -0.47
CASC3-207ENST00000581849 F8WEM9 126 aa12.12□□□□□ -0.47
CASC3-207ENST00000581849 S100A6P06703 90 aa12.11□□□□□ -0.47
CASC3-207ENST00000581849 PCOTHQ58A44 107 aa12.11□□□□□ -0.47
CASC3-207ENST00000581849 TCL1BO95988 128 aa12.1□□□□□ -0.47
CASC3-207ENST00000581849 A0A0G2JQZ4 141 aa12.09□□□□□ -0.47
CASC3-207ENST00000581849 hADV29S1A0JD25 119 aa12.09□□□□□ -0.47
CASC3-207ENST00000581849 IGLV8-61A0A075B6I0 122 aa12.07□□□□□ -0.48
CASC3-207ENST00000581849 Q6JHZ5 121 aa12.07□□□□□ -0.48
CASC3-207ENST00000581849 Q6ZQY7 126 aa12.07□□□□□ -0.48
CASC3-207ENST00000581849 LCE2CQ5TA81 110 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms