RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 NCR3O14931 201 aa4.95□□□□□ -1.62
NUP85-217ENST00000581335 SPINK1P00995 79 aa4.95□□□□□ -1.62
NUP85-217ENST00000581335 KRTAP13-3Q3SY46 172 aa4.95□□□□□ -1.62
NUP85-217ENST00000581335 MEIG1Q5JSS6 88 aa4.95□□□□□ -1.62
NUP85-217ENST00000581335 BOD1L2Q8IYS8 172 aa4.95□□□□□ -1.62
NUP85-217ENST00000581335 IFI27L1Q96BM0 104 aa4.95□□□□□ -1.62
NUP85-217ENST00000581335 FAM218AQ96MZ4 157 aa4.95□□□□□ -1.62
NUP85-217ENST00000581335 ETDCA0A1B0GVM5 59 aa4.94□□□□□ -1.62
NUP85-217ENST00000581335 LINC00587B1AMM8 73 aa4.94□□□□□ -1.62
NUP85-217ENST00000581335 LINC00483Q53H64 154 aa4.94□□□□□ -1.62
NUP85-217ENST00000581335 MIR7-3HGQ8N6C7 128 aa4.94□□□□□ -1.62
NUP85-217ENST00000581335 CHCHD1Q96BP2 118 aaKnown RBP4.94□□□□□ -1.62
NUP85-217ENST00000581335 TRBV10-3A0A0K0K1G6 114 aa4.93□□□□□ -1.62
NUP85-217ENST00000581335 ASB16-AS1Q495Z4 193 aa4.93□□□□□ -1.62
NUP85-217ENST00000581335 MYMXA0A1B0GTQ4 84 aa4.92□□□□□ -1.62
NUP85-217ENST00000581335 S100A12P80511 92 aa4.92□□□□□ -1.62
NUP85-217ENST00000581335 SSBP3-AS1Q7Z2R9 100 aa4.92□□□□□ -1.62
NUP85-217ENST00000581335 MAP1LC3CQ9BXW4 147 aa4.92□□□□□ -1.62
NUP85-217ENST00000581335 NDUFA12Q9UI09 145 aa4.92□□□□□ -1.62
NUP85-217ENST00000581335 LOC107984156A0A0G2JMH3 177 aa4.91□□□□□ -1.62
NUP85-217ENST00000581335 SNAPINO95295 136 aa4.91□□□□□ -1.62
NUP85-217ENST00000581335 APOC3P02656 99 aa4.91□□□□□ -1.62
NUP85-217ENST00000581335 RPS29P62273 56 aaKnown RBP4.91□□□□□ -1.62
NUP85-217ENST00000581335 ARL17AQ8IVW1 177 aa4.91□□□□□ -1.62
NUP85-217ENST00000581335 Q8N9P0 234 aaPredicted RBP4.91□□□□□ -1.62
NUP85-217ENST00000581335 TRBV10-2A0A0K0K1G8 114 aa4.9□□□□□ -1.63
NUP85-217ENST00000581335 ERC2-IT1O76042 136 aa4.9□□□□□ -1.63
NUP85-217ENST00000581335 DDTP30046 118 aa4.9□□□□□ -1.63
NUP85-217ENST00000581335 LINC01547P58512 204 aaPredicted RBP4.9□□□□□ -1.63
NUP85-217ENST00000581335 MOBPQ13875 183 aa4.9□□□□□ -1.63
NUP85-217ENST00000581335 Q6ZVQ6 151 aa4.9□□□□□ -1.63
NUP85-217ENST00000581335 SVBPQ8N300 66 aa4.9□□□□□ -1.63
NUP85-217ENST00000581335 Q8N377 158 aa4.9□□□□□ -1.63
NUP85-217ENST00000581335 FAM19A2Q8N3H0 131 aa4.9□□□□□ -1.63
NUP85-217ENST00000581335 YPEL4Q96NS1 127 aa4.9□□□□□ -1.63
NUP85-217ENST00000581335 LEPROTO15243 131 aa4.89□□□□□ -1.63
NUP85-217ENST00000581335 HSBP1O75506 76 aa4.89□□□□□ -1.63
NUP85-217ENST00000581335 NDUFA5Q16718 116 aa4.89□□□□□ -1.63
NUP85-217ENST00000581335 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
NUP85-217ENST00000581335 KRTAP4-1Q9BYQ7 146 aa4.89□□□□□ -1.63
NUP85-217ENST00000581335 H0Y8G0 127 aa4.88□□□□□ -1.63
NUP85-217ENST00000581335 SLC25A20O43772 301 aa4.88□□□□□ -1.63
NUP85-217ENST00000581335 TSPEAR-AS2P59090 65 aa4.88□□□□□ -1.63
NUP85-217ENST00000581335 Q6ZRX8 168 aa4.88□□□□□ -1.63
NUP85-217ENST00000581335 Q9BRP9 147 aa4.88□□□□□ -1.63
NUP85-217ENST00000581335 NDUFC2O95298 119 aa4.87□□□□□ -1.63
NUP85-217ENST00000581335 SPANXB1Q9NS25 103 aaPredicted RBP4.87□□□□□ -1.63
NUP85-217ENST00000581335 J3QQQ9 107 aa4.86□□□□□ -1.63
NUP85-217ENST00000581335 LEPROTL1O95214 131 aa4.86□□□□□ -1.63
NUP85-217ENST00000581335 IGLV6-57P01721 117 aa4.86□□□□□ -1.63
NUP85-217ENST00000581335 JOSD1Q15040 202 aaPredicted RBP4.86□□□□□ -1.63
NUP85-217ENST00000581335 S100A7L2Q5SY68 101 aa4.86□□□□□ -1.63
NUP85-217ENST00000581335 MIEN1Q9BRT3 115 aa4.86□□□□□ -1.63
NUP85-217ENST00000581335 PLNP26678 52 aa4.85□□□□□ -1.63
NUP85-217ENST00000581335 NMUP48645 174 aa4.85□□□□□ -1.63
NUP85-217ENST00000581335 HERVK_113P61574 105 aa4.85□□□□□ -1.63
NUP85-217ENST00000581335 TRAV23DV6A0A075B6W5 121 aa4.84□□□□□ -1.63
NUP85-217ENST00000581335 LGALS3P17931 250 aaKnown RBP4.84□□□□□ -1.63
NUP85-217ENST00000581335 C9orf153Q5TBE3 101 aa4.84□□□□□ -1.63
NUP85-217ENST00000581335 ZNF73O43830 326 aaPredicted RBP4.83□□□□□ -1.64
NUP85-217ENST00000581335 SERF1AO75920 110 aa4.83□□□□□ -1.64
NUP85-217ENST00000581335 DPM2O94777 84 aa4.83□□□□□ -1.64
NUP85-217ENST00000581335 IGKCP01834 107 aa4.83□□□□□ -1.64
NUP85-217ENST00000581335 TRGC2P03986 189 aa4.83□□□□□ -1.64
NUP85-217ENST00000581335 SOSTDC1Q6X4U4 206 aa4.83□□□□□ -1.64
NUP85-217ENST00000581335 HSPB8Q9UJY1 196 aa4.83□□□□□ -1.64
NUP85-217ENST00000581335 FABP4P15090 132 aa4.82□□□□□ -1.64
NUP85-217ENST00000581335 HINT1P49773 126 aaPredicted RBP4.82□□□□□ -1.64
NUP85-217ENST00000581335 NPC2P61916 151 aa4.82□□□□□ -1.64
NUP85-217ENST00000581335 ADAMTSL4-AS1Q5T5F5 129 aa4.82□□□□□ -1.64
NUP85-217ENST00000581335 ST20-AS1Q8NBB2 130 aa4.82□□□□□ -1.64
NUP85-217ENST00000581335 PMCHL2Q9BQD1 86 aa4.82□□□□□ -1.64
NUP85-217ENST00000581335 A0A0J9YXY3 114 aa4.81□□□□□ -1.64
NUP85-217ENST00000581335 CBY1Q9Y3M2 126 aa4.81□□□□□ -1.64
NUP85-217ENST00000581335 E9PLD3 99 aa4.8□□□□□ -1.64
NUP85-217ENST00000581335 SPRR1BP22528 89 aa4.79□□□□□ -1.64
NUP85-217ENST00000581335 SLC25A34Q6PIV7 304 aa4.79□□□□□ -1.64
NUP85-217ENST00000581335 LIMD2Q9BT23 127 aa4.79□□□□□ -1.64
NUP85-217ENST00000581335 HRCT1Q6UXD1 115 aa4.78□□□□□ -1.64
NUP85-217ENST00000581335 LINC00518Q8N0U6 118 aa4.78□□□□□ -1.64
NUP85-217ENST00000581335 OR13C6PQ8NH95 151 aa4.78□□□□□ -1.64
NUP85-217ENST00000581335 SPANXCQ9NY87 97 aa4.78□□□□□ -1.64
NUP85-217ENST00000581335 DHRS4-AS1Q9P1J3 65 aa4.78□□□□□ -1.64
NUP85-217ENST00000581335 LAMTOR3Q9UHA4 124 aa4.78□□□□□ -1.64
NUP85-217ENST00000581335 IGKV2D-30A0A075B6S6 120 aa4.77□□□□□ -1.65
NUP85-217ENST00000581335 NOTCH2NLQ7Z3S9 236 aa4.77□□□□□ -1.65
NUP85-217ENST00000581335 LINC00308Q8TCZ7 52 aa4.77□□□□□ -1.65
NUP85-217ENST00000581335 LITAFQ99732 161 aa4.77□□□□□ -1.65
NUP85-217ENST00000581335 C9orf92A6NGG3 77 aa4.76□□□□□ -1.65
NUP85-217ENST00000581335 TIMM17BO60830 172 aa4.76□□□□□ -1.65
NUP85-217ENST00000581335 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
NUP85-217ENST00000581335 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
NUP85-217ENST00000581335 CRCT1Q9UGL9 99 aa4.76□□□□□ -1.65
NUP85-217ENST00000581335 IGLV8-61A0A075B6I0 122 aa4.75□□□□□ -1.65
NUP85-217ENST00000581335 COLCA2A8K830 154 aa4.75□□□□□ -1.65
NUP85-217ENST00000581335 CD164Q04900 197 aa4.75□□□□□ -1.65
NUP85-217ENST00000581335 TAL2Q16559 108 aa4.75□□□□□ -1.65
NUP85-217ENST00000581335 SPANXDQ9BXN6 97 aa4.75□□□□□ -1.65
NUP85-217ENST00000581335 SYS1-DBNDD2H3BUS1 97 aa4.74□□□□□ -1.65
NUP85-217ENST00000581335 COX7BP24311 80 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms