RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 OR13C6PQ8NH95 151 aa3.99□□□□□ -1.77
PTPRM-213ENST00000580949 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.98□□□□□ -1.77
PTPRM-213ENST00000580949 TRBV20-1A0A075B6N2 111 aa3.98□□□□□ -1.77
PTPRM-213ENST00000580949 TRBV10-2A0A0K0K1G8 114 aa3.98□□□□□ -1.77
PTPRM-213ENST00000580949 FAM168BA1KXE4 195 aa3.98□□□□□ -1.77
PTPRM-213ENST00000580949 IGLV6-57P01721 117 aa3.98□□□□□ -1.77
PTPRM-213ENST00000580949 FAM218AQ96MZ4 157 aa3.98□□□□□ -1.77
PTPRM-213ENST00000580949 A0A087WTM6 91 aa3.97□□□□□ -1.77
PTPRM-213ENST00000580949 IGLV5-52A0A0A0MRZ9 124 aa3.97□□□□□ -1.77
PTPRM-213ENST00000580949 TRBV10-3A0A0K0K1G6 114 aa3.97□□□□□ -1.77
PTPRM-213ENST00000580949 LOC107984640A0A0U1RRK4 108 aa3.97□□□□□ -1.77
PTPRM-213ENST00000580949 M0R378 163 aa3.97□□□□□ -1.77
PTPRM-213ENST00000580949 FUSP35637 526 aaKnown RBP eCLIP3.97□□□□□ -1.77
PTPRM-213ENST00000580949 LINC01620Q4KN68 170 aa3.97□□□□□ -1.77
PTPRM-213ENST00000580949 C14orf177Q52M58 125 aa3.97□□□□□ -1.77
PTPRM-213ENST00000580949 LYRM7Q5U5X0 104 aa3.97□□□□□ -1.77
PTPRM-213ENST00000580949 TMEM126AQ9H061 195 aa3.97□□□□□ -1.77
PTPRM-213ENST00000580949 DNAH2Q9P225 4427 aa3.96□□□□□ -1.77
PTPRM-213ENST00000580949 ALMS1Q8TCU4 4167 aa3.96□□□□□ -1.77
PTPRM-213ENST00000580949 A0A096LNI7 61 aa3.96□□□□□ -1.78
PTPRM-213ENST00000580949 LST1O00453 97 aa3.96□□□□□ -1.78
PTPRM-213ENST00000580949 COX6CP09669 75 aa3.96□□□□□ -1.78
PTPRM-213ENST00000580949 ATXN8Q156A1 80 aa3.96□□□□□ -1.78
PTPRM-213ENST00000580949 C1orf134Q5TEV5 83 aa3.96□□□□□ -1.78
PTPRM-213ENST00000580949 SDIM1Q6ZPB5 146 aa3.96□□□□□ -1.78
PTPRM-213ENST00000580949 Q8N814 137 aa3.96□□□□□ -1.78
PTPRM-213ENST00000580949 C9orf163Q8N9P6 203 aa3.96□□□□□ -1.78
PTPRM-213ENST00000580949 C7orf33Q8WU49 177 aa3.96□□□□□ -1.78
PTPRM-213ENST00000580949 DNAH17Q9UFH2 4485 aa3.95□□□□□ -1.78
PTPRM-213ENST00000580949 IGLV5-37A0A075B6J1 123 aa3.95□□□□□ -1.78
PTPRM-213ENST00000580949 A0A087WYN8 130 aa3.95□□□□□ -1.78
PTPRM-213ENST00000580949 A0A1W2PNN7 141 aa3.95□□□□□ -1.78
PTPRM-213ENST00000580949 C9JAW5 83 aa3.95□□□□□ -1.78
PTPRM-213ENST00000580949 F8W1H4 67 aa3.95□□□□□ -1.78
PTPRM-213ENST00000580949 C6orf99Q4VX62 202 aa3.95□□□□□ -1.78
PTPRM-213ENST00000580949 S100A7L2Q5SY68 101 aa3.95□□□□□ -1.78
PTPRM-213ENST00000580949 DNAH6Q9C0G6 4158 aa3.95□□□□□ -1.78
PTPRM-213ENST00000580949 KMT2AQ03164 3969 aa3.95□□□□□ -1.78
PTPRM-213ENST00000580949 IGKV2-24A0A0C4DH68 120 aa3.94□□□□□ -1.78
PTPRM-213ENST00000580949 C16orf90A8MZG2 172 aa3.94□□□□□ -1.78
PTPRM-213ENST00000580949 H0YGX0 51 aa3.94□□□□□ -1.78
PTPRM-213ENST00000580949 PANO1I0J062 215 aa3.94□□□□□ -1.78
PTPRM-213ENST00000580949 RTL8CO15255 209 aa3.94□□□□□ -1.78
PTPRM-213ENST00000580949 CHTF8P0CG12 524 aa3.94□□□□□ -1.78
PTPRM-213ENST00000580949 LINC01600Q96MT4 127 aa3.94□□□□□ -1.78
PTPRM-213ENST00000580949 C22orf24Q9Y442 160 aa3.94□□□□□ -1.78
PTPRM-213ENST00000580949 TRAV23DV6A0A075B6W5 121 aa3.93□□□□□ -1.78
PTPRM-213ENST00000580949 RPL37AP8A6NKH3 93 aa3.93□□□□□ -1.78
PTPRM-213ENST00000580949 SLC25A20O43772 301 aa3.93□□□□□ -1.78
PTPRM-213ENST00000580949 TRACP01848 142 aa3.93□□□□□ -1.78
PTPRM-213ENST00000580949 ETDBQ3ZM63 59 aa3.93□□□□□ -1.78
PTPRM-213ENST00000580949 FAM19A5Q7Z5A7 132 aaPredicted RBP3.93□□□□□ -1.78
PTPRM-213ENST00000580949 NKAPP1Q8N9T2 125 aa3.93□□□□□ -1.78
PTPRM-213ENST00000580949 LINC00167Q96N53 147 aa3.93□□□□□ -1.78
PTPRM-213ENST00000580949 KCNQ1DNQ9H478 68 aa3.93□□□□□ -1.78
PTPRM-213ENST00000580949 IGLV1-50A0A075B6I6 118 aa3.92□□□□□ -1.78
PTPRM-213ENST00000580949 ZNF73O43830 326 aaPredicted RBP3.92□□□□□ -1.78
PTPRM-213ENST00000580949 LINC00575Q6W349 94 aa3.92□□□□□ -1.78
PTPRM-213ENST00000580949 KRTAP11-1Q8IUC1 163 aa3.92□□□□□ -1.78
PTPRM-213ENST00000580949 ANKRD29Q8N6D5 301 aa3.92□□□□□ -1.78
PTPRM-213ENST00000580949 SACSQ9NZJ4 4579 aa3.92□□□□□ -1.78
PTPRM-213ENST00000580949 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
PTPRM-213ENST00000580949 KRTAP4-16G5E9R7 235 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-213ENST00000580949 M0QXV9 152 aa3.91□□□□□ -1.78
PTPRM-213ENST00000580949 BAALC-AS2P0C853 105 aa3.91□□□□□ -1.78
PTPRM-213ENST00000580949 OCIAD2Q56VL3 154 aa3.91□□□□□ -1.78
PTPRM-213ENST00000580949 MRPL55Q7Z7F7 128 aaKnown RBP3.91□□□□□ -1.78
PTPRM-213ENST00000580949 DIRC1Q969H9 104 aa3.91□□□□□ -1.78
PTPRM-213ENST00000580949 HYDINQ4G0P3 5121 aa3.9□□□□□ -1.78
PTPRM-213ENST00000580949 TRBV7-6A0A0J9YX20 115 aa3.9□□□□□ -1.79
PTPRM-213ENST00000580949 LCE6AA0A183 80 aa3.9□□□□□ -1.79
PTPRM-213ENST00000580949 EPM2AB3EWF7 344 aa3.9□□□□□ -1.79
PTPRM-213ENST00000580949 COX7BP24311 80 aa3.9□□□□□ -1.79
PTPRM-213ENST00000580949 SPRR1AP35321 89 aa3.9□□□□□ -1.79
PTPRM-213ENST00000580949 ELOF1P60002 83 aaKnown RBP3.9□□□□□ -1.79
PTPRM-213ENST00000580949 TEN1Q86WV5 123 aa3.9□□□□□ -1.79
PTPRM-213ENST00000580949 H3BT86 120 aa3.89□□□□□ -1.79
PTPRM-213ENST00000580949 PHF5AQ7RTV0 110 aaKnown RBP3.89□□□□□ -1.79
PTPRM-213ENST00000580949 SPACA4Q8TDM5 124 aa3.89□□□□□ -1.79
PTPRM-213ENST00000580949 TEX49A0A1B0GTD5 131 aa3.88□□□□□ -1.79
PTPRM-213ENST00000580949 A0A1B0GX51 115 aa3.88□□□□□ -1.79
PTPRM-213ENST00000580949 hADV29S1A0JD25 119 aa3.88□□□□□ -1.79
PTPRM-213ENST00000580949 LINC00474Q9P2X8 69 aa3.88□□□□□ -1.79
PTPRM-213ENST00000580949 RYR2Q92736 4967 aa3.87□□□□□ -1.79
PTPRM-213ENST00000580949 FAT2Q9NYQ8 4349 aa3.87□□□□□ -1.79
PTPRM-213ENST00000580949 REG3GQ6UW15 175 aa3.87□□□□□ -1.79
PTPRM-213ENST00000580949 PPDPFLQ8WWR9 84 aa3.87□□□□□ -1.79
PTPRM-213ENST00000580949 DPH3Q96FX2 82 aa3.87□□□□□ -1.79
PTPRM-213ENST00000580949 Q9BRP9 147 aa3.87□□□□□ -1.79
PTPRM-213ENST00000580949 PKIGQ9Y2B9 76 aa3.87□□□□□ -1.79
PTPRM-213ENST00000580949 CBY1Q9Y3M2 126 aa3.87□□□□□ -1.79
PTPRM-213ENST00000580949 ERC2-IT1O76042 136 aa3.86□□□□□ -1.79
PTPRM-213ENST00000580949 DNAL4O96015 105 aa3.86□□□□□ -1.79
PTPRM-213ENST00000580949 KRTAP10-1P60331 282 aa3.86□□□□□ -1.79
PTPRM-213ENST00000580949 Q6ZQY7 126 aa3.86□□□□□ -1.79
PTPRM-213ENST00000580949 Q6ZRX8 168 aa3.86□□□□□ -1.79
PTPRM-213ENST00000580949 OBSCN-AS1Q96MR7 158 aa3.86□□□□□ -1.79
PTPRM-213ENST00000580949 PLAC8Q9NZF1 115 aa3.86□□□□□ -1.79
PTPRM-213ENST00000580949 ORMDL1Q9P0S3 153 aa3.86□□□□□ -1.79
PTPRM-213ENST00000580949 DNAH5Q8TE73 4624 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 220.5 ms