RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 Q6ZRX8 168 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 HIST1H2BHQ93079 126 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 HIST1H2BNQ99877 126 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 HIST1H2BMQ99879 126 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 A0A0U1RQV1 116 aa12.09□□□□□ -0.47
CSNK1D-215ENST00000580784 TRAV23DV6A0A075B6W5 121 aa12.08□□□□□ -0.48
CSNK1D-215ENST00000580784 IGLV9-49A0A0B4J1Y8 123 aa12.08□□□□□ -0.48
CSNK1D-215ENST00000580784 SPINK1P00995 79 aa12.07□□□□□ -0.48
CSNK1D-215ENST00000580784 MOBPQ13875 183 aa12.07□□□□□ -0.48
CSNK1D-215ENST00000580784 FP248Q71RG6 208 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-215ENST00000580784 ZNF73O43830 326 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-215ENST00000580784 JOSD1Q15040 202 aaPredicted RBP12.04□□□□□ -0.48
CSNK1D-215ENST00000580784 LINC01545Q5VT33 79 aa12.04□□□□□ -0.48
CSNK1D-215ENST00000580784 SSBP3-AS1Q7Z2R9 100 aa12.04□□□□□ -0.48
CSNK1D-215ENST00000580784 LITAFQ99732 161 aa12.04□□□□□ -0.48
CSNK1D-215ENST00000580784 LINC00308Q8TCZ7 52 aa12.03□□□□□ -0.48
CSNK1D-215ENST00000580784 PET117Q6UWS5 81 aa12.02□□□□□ -0.49
CSNK1D-215ENST00000580784 FAT4Q6V0I7 4981 aa12.01□□□□□ -0.49
CSNK1D-215ENST00000580784 KRTAP13-3Q3SY46 172 aa12□□□□□ -0.49
CSNK1D-215ENST00000580784 ST20-AS1Q8NBB2 130 aa12□□□□□ -0.49
CSNK1D-215ENST00000580784 TIMM17BO60830 172 aa11.99□□□□□ -0.49
CSNK1D-215ENST00000580784 TTTY13Q9BZ97 58 aa11.99□□□□□ -0.49
CSNK1D-215ENST00000580784 SPANXCQ9NY87 97 aa11.99□□□□□ -0.49
CSNK1D-215ENST00000580784 ZNF815PA8K554 130 aa11.98□□□□□ -0.49
CSNK1D-215ENST00000580784 C3orf79P0CE67 100 aa11.98□□□□□ -0.49
CSNK1D-215ENST00000580784 OR13C6PQ8NH95 151 aa11.98□□□□□ -0.49
CSNK1D-215ENST00000580784 HINT1P49773 126 aaPredicted RBP11.97□□□□□ -0.49
CSNK1D-215ENST00000580784 Q8N377 158 aa11.97□□□□□ -0.49
CSNK1D-215ENST00000580784 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-215ENST00000580784 CBY1Q9Y3M2 126 aa11.96□□□□□ -0.49
CSNK1D-215ENST00000580784 C9orf153Q5TBE3 101 aa11.95□□□□□ -0.5
CSNK1D-215ENST00000580784 KRTDAPP60985 99 aa11.93□□□□□ -0.5
CSNK1D-215ENST00000580784 LCE2AQ5TA79 106 aaPredicted RBP11.93□□□□□ -0.5
CSNK1D-215ENST00000580784 C5orf52A6NGY3 159 aa11.92□□□□□ -0.5
CSNK1D-215ENST00000580784 COA6Q5JTJ3 125 aaKnown RBP11.92□□□□□ -0.5
CSNK1D-215ENST00000580784 SPANXDQ9BXN6 97 aa11.92□□□□□ -0.5
CSNK1D-215ENST00000580784 SLC25A20O43772 301 aa11.91□□□□□ -0.5
CSNK1D-215ENST00000580784 DHRS4-AS1Q9P1J3 65 aa11.89□□□□□ -0.51
CSNK1D-215ENST00000580784 LINC00518Q8N0U6 118 aa11.88□□□□□ -0.51
CSNK1D-215ENST00000580784 SPRR1BP22528 89 aa11.87□□□□□ -0.51
CSNK1D-215ENST00000580784 COX7BP24311 80 aa11.86□□□□□ -0.51
CSNK1D-215ENST00000580784 ASB16-AS1Q495Z4 193 aa11.86□□□□□ -0.51
CSNK1D-215ENST00000580784 C6orf99Q4VX62 202 aa11.86□□□□□ -0.51
CSNK1D-215ENST00000580784 ANKRD39Q53RE8 183 aa11.86□□□□□ -0.51
CSNK1D-215ENST00000580784 ELOF1P60002 83 aaKnown RBP11.85□□□□□ -0.51
CSNK1D-215ENST00000580784 SCGB1D4Q6XE38 83 aa11.85□□□□□ -0.51
CSNK1D-215ENST00000580784 ATOH7Q8N100 152 aa11.84□□□□□ -0.51
CSNK1D-215ENST00000580784 C20orf202A1L168 122 aa11.82□□□□□ -0.52
CSNK1D-215ENST00000580784 SLC25A34Q6PIV7 304 aa11.82□□□□□ -0.52
CSNK1D-215ENST00000580784 HRCT1Q6UXD1 115 aa11.81□□□□□ -0.52
CSNK1D-215ENST00000580784 LAMTOR3Q9UHA4 124 aa11.81□□□□□ -0.52
CSNK1D-215ENST00000580784 SEC61BP60468 96 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-215ENST00000580784 DEFB105AQ8NG35 78 aa11.8□□□□□ -0.52
CSNK1D-215ENST00000580784 TAL2Q16559 108 aa11.79□□□□□ -0.52
CSNK1D-215ENST00000580784 PCP2Q8IVA1 136 aa11.79□□□□□ -0.52
CSNK1D-215ENST00000580784 KRTAP4-1Q9BYQ7 146 aa11.79□□□□□ -0.52
CSNK1D-215ENST00000580784 IFITM1P13164 125 aa11.78□□□□□ -0.52
CSNK1D-215ENST00000580784 MUSTN1Q8IVN3 82 aa11.78□□□□□ -0.52
CSNK1D-215ENST00000580784 A6NDN8 102 aa11.77□□□□□ -0.53
CSNK1D-215ENST00000580784 Q1RN00 199 aa11.77□□□□□ -0.53
CSNK1D-215ENST00000580784 COPS9Q8WXC6 57 aa11.77□□□□□ -0.53
CSNK1D-215ENST00000580784 TRBV7-6A0A0J9YX20 115 aa11.76□□□□□ -0.53
CSNK1D-215ENST00000580784 Q6ZVH6 145 aa11.76□□□□□ -0.53
CSNK1D-215ENST00000580784 XP32Q5T750 250 aa11.75□□□□□ -0.53
CSNK1D-215ENST00000580784 TEX49A0A1B0GTD5 131 aa11.74□□□□□ -0.53
CSNK1D-215ENST00000580784 LIMD2Q9BT23 127 aa11.74□□□□□ -0.53
CSNK1D-215ENST00000580784 KRTAP9-2Q9BYQ4 174 aa11.74□□□□□ -0.53
CSNK1D-215ENST00000580784 A0A1B0GWB2 263 aa11.73□□□□□ -0.53
CSNK1D-215ENST00000580784 AKR1D1P51857 326 aa11.72□□□□□ -0.53
CSNK1D-215ENST00000580784 SMIM29Q86T20 159 aa11.71□□□□□ -0.53
CSNK1D-215ENST00000580784 PRO1933Q9H354 126 aa11.71□□□□□ -0.53
CSNK1D-215ENST00000580784 LINC01547P58512 204 aaPredicted RBP11.7□□□□□ -0.54
CSNK1D-215ENST00000580784 IGLV5-48A0A075B6I7 105 aa11.67□□□□□ -0.54
CSNK1D-215ENST00000580784 SNRPEP62304 92 aaKnown RBP11.67□□□□□ -0.54
CSNK1D-215ENST00000580784 CD164Q04900 197 aa11.67□□□□□ -0.54
CSNK1D-215ENST00000580784 SMIM11BQ8TCY0 68 aa11.67□□□□□ -0.54
CSNK1D-215ENST00000580784 TRAV13-2A0A0B4J235 113 aa11.66□□□□□ -0.54
CSNK1D-215ENST00000580784 H7C2G1 150 aa11.66□□□□□ -0.54
CSNK1D-215ENST00000580784 A0A0G2JQZ4 141 aa11.65□□□□□ -0.54
CSNK1D-215ENST00000580784 HIST3H2BBQ8N257 126 aa11.65□□□□□ -0.54
CSNK1D-215ENST00000580784 A4D1N5 150 aa11.64□□□□□ -0.55
CSNK1D-215ENST00000580784 C9orf92A6NGG3 77 aa11.64□□□□□ -0.55
CSNK1D-215ENST00000580784 HIST1H2BLQ99880 126 aa11.64□□□□□ -0.55
CSNK1D-215ENST00000580784 S100A2P29034 98 aa11.61□□□□□ -0.55
CSNK1D-215ENST00000580784 NHP2Q9NX24 153 aaKnown RBP11.61□□□□□ -0.55
CSNK1D-215ENST00000580784 Q5XG85 94 aa11.58□□□□□ -0.56
CSNK1D-215ENST00000580784 HSBP1L1C9JCN9 74 aa11.57□□□□□ -0.56
CSNK1D-215ENST00000580784 PCOTHQ58A44 107 aa11.57□□□□□ -0.56
CSNK1D-215ENST00000580784 C1orf195Q5TG92 126 aa11.57□□□□□ -0.56
CSNK1D-215ENST00000580784 VAMP3Q15836 100 aa11.55□□□□□ -0.56
CSNK1D-215ENST00000580784 LINC00575Q6W349 94 aa11.54□□□□□ -0.56
CSNK1D-215ENST00000580784 S100A6P06703 90 aa11.52□□□□□ -0.57
CSNK1D-215ENST00000580784 IGLV8-61A0A075B6I0 122 aa11.51□□□□□ -0.57
CSNK1D-215ENST00000580784 LCE2CQ5TA81 110 aa11.5□□□□□ -0.57
CSNK1D-215ENST00000580784 hADV29S1A0JD25 119 aa11.49□□□□□ -0.57
CSNK1D-215ENST00000580784 S100A1P23297 94 aa11.49□□□□□ -0.57
CSNK1D-215ENST00000580784 Q6ZQY7 126 aa11.49□□□□□ -0.57
CSNK1D-215ENST00000580784 F8WEM9 126 aa11.48□□□□□ -0.57
CSNK1D-215ENST00000580784 SCGB1D1O95968 90 aa11.47□□□□□ -0.57
CSNK1D-215ENST00000580784 C12orf57Q99622 126 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms