RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 TIMM17BO60830 172 aa9.67□□□□□ -0.86
SREBF1-219ENST00000580540 GAGE2AQ6NT46 116 aa9.67□□□□□ -0.86
SREBF1-219ENST00000580540 OR13C6PQ8NH95 151 aa9.67□□□□□ -0.86
SREBF1-219ENST00000580540 RNF213Q63HN8 5207 aa9.67□□□□□ -0.86
SREBF1-219ENST00000580540 S100A1P23297 94 aa9.66□□□□□ -0.86
SREBF1-219ENST00000580540 ERC2-IT1O76042 136 aa9.65□□□□□ -0.86
SREBF1-219ENST00000580540 ANKRD39Q53RE8 183 aa9.65□□□□□ -0.86
SREBF1-219ENST00000580540 SCGB1D4Q6XE38 83 aa9.65□□□□□ -0.86
SREBF1-219ENST00000580540 Q6ZRX8 168 aa9.65□□□□□ -0.86
SREBF1-219ENST00000580540 RETNLBQ9BQ08 111 aa9.65□□□□□ -0.86
SREBF1-219ENST00000580540 SPANXCQ9NY87 97 aa9.65□□□□□ -0.86
SREBF1-219ENST00000580540 Q9BRP9 147 aa9.64□□□□□ -0.87
SREBF1-219ENST00000580540 ZNF73O43830 326 aaPredicted RBP9.63□□□□□ -0.87
SREBF1-219ENST00000580540 S100A2P29034 98 aa9.62□□□□□ -0.87
SREBF1-219ENST00000580540 HINT1P49773 126 aaPredicted RBP9.62□□□□□ -0.87
SREBF1-219ENST00000580540 JOSD1Q15040 202 aaPredicted RBP9.62□□□□□ -0.87
SREBF1-219ENST00000580540 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
SREBF1-219ENST00000580540 CBY1Q9Y3M2 126 aa9.62□□□□□ -0.87
SREBF1-219ENST00000580540 AKR1D1P51857 326 aa9.6□□□□□ -0.87
SREBF1-219ENST00000580540 Q8NBF4 154 aa9.6□□□□□ -0.87
SREBF1-219ENST00000580540 IGLV9-49A0A0B4J1Y8 123 aa9.59□□□□□ -0.87
SREBF1-219ENST00000580540 LINC00483Q53H64 154 aa9.59□□□□□ -0.87
SREBF1-219ENST00000580540 SPAG11AQ6PDA7 123 aa9.59□□□□□ -0.87
SREBF1-219ENST00000580540 PCP2Q8IVA1 136 aa9.59□□□□□ -0.87
SREBF1-219ENST00000580540 HIST3H2BBQ8N257 126 aa9.59□□□□□ -0.87
SREBF1-219ENST00000580540 S100A6P06703 90 aa9.58□□□□□ -0.88
SREBF1-219ENST00000580540 LINC00518Q8N0U6 118 aa9.58□□□□□ -0.88
SREBF1-219ENST00000580540 SPANXDQ9BXN6 97 aa9.58□□□□□ -0.88
SREBF1-219ENST00000580540 HIST1H2BLQ99880 126 aa9.57□□□□□ -0.88
SREBF1-219ENST00000580540 MOBPQ13875 183 aa9.56□□□□□ -0.88
SREBF1-219ENST00000580540 CTAG1AP78358 180 aa9.55□□□□□ -0.88
SREBF1-219ENST00000580540 ST20-AS1Q8NBB2 130 aa9.55□□□□□ -0.88
SREBF1-219ENST00000580540 COPS9Q8WXC6 57 aa9.55□□□□□ -0.88
SREBF1-219ENST00000580540 SNRPEP62304 92 aaKnown RBP9.54□□□□□ -0.88
SREBF1-219ENST00000580540 MUSTN1Q8IVN3 82 aa9.54□□□□□ -0.88
SREBF1-219ENST00000580540 IGLV7-46A0A075B6I9 117 aa9.53□□□□□ -0.88
SREBF1-219ENST00000580540 HSBP1L1C9JCN9 74 aa9.53□□□□□ -0.88
SREBF1-219ENST00000580540 IFITM1P13164 125 aa9.53□□□□□ -0.88
SREBF1-219ENST00000580540 A6NDN8 102 aa9.52□□□□□ -0.89
SREBF1-219ENST00000580540 C6orf99Q4VX62 202 aa9.52□□□□□ -0.89
SREBF1-219ENST00000580540 C9orf153Q5TBE3 101 aa9.52□□□□□ -0.89
SREBF1-219ENST00000580540 Q6ZVH6 145 aa9.52□□□□□ -0.89
SREBF1-219ENST00000580540 COX7BP24311 80 aa9.51□□□□□ -0.89
SREBF1-219ENST00000580540 SSBP3-AS1Q7Z2R9 100 aa9.51□□□□□ -0.89
SREBF1-219ENST00000580540 DHRS4-AS1Q9P1J3 65 aa9.51□□□□□ -0.89
SREBF1-219ENST00000580540 SPINK1P00995 79 aa9.49□□□□□ -0.89
SREBF1-219ENST00000580540 SCGB1D1O95968 90 aa9.48□□□□□ -0.89
SREBF1-219ENST00000580540 ELOF1P60002 83 aaKnown RBP9.48□□□□□ -0.89
SREBF1-219ENST00000580540 CDIP1Q9H305 208 aa9.48□□□□□ -0.89
SREBF1-219ENST00000580540 C5orf52A6NGY3 159 aa9.47□□□□□ -0.89
SREBF1-219ENST00000580540 DEFB105AQ8NG35 78 aa9.46□□□□□ -0.9
SREBF1-219ENST00000580540 TAL2Q16559 108 aa9.45□□□□□ -0.9
SREBF1-219ENST00000580540 TRAV13-2A0A0B4J235 113 aa9.44□□□□□ -0.9
SREBF1-219ENST00000580540 TPRXLQ17RH7 258 aa9.44□□□□□ -0.9
SREBF1-219ENST00000580540 SLC25A34Q6PIV7 304 aa9.44□□□□□ -0.9
SREBF1-219ENST00000580540 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
SREBF1-219ENST00000580540 FP248Q71RG6 208 aaPredicted RBP9.43□□□□□ -0.9
SREBF1-219ENST00000580540 LAMTOR3Q9UHA4 124 aa9.43□□□□□ -0.9
SREBF1-219ENST00000580540 A0A1B0GWB2 263 aa9.42□□□□□ -0.9
SREBF1-219ENST00000580540 SPRR1BP22528 89 aa9.42□□□□□ -0.9
SREBF1-219ENST00000580540 Q1RN00 199 aa9.4□□□□□ -0.9
SREBF1-219ENST00000580540 SMIM11BQ8TCY0 68 aa9.4□□□□□ -0.9
SREBF1-219ENST00000580540 RPS29P62273 56 aaKnown RBP9.39□□□□□ -0.91
SREBF1-219ENST00000580540 HRCT1Q6UXD1 115 aa9.39□□□□□ -0.91
SREBF1-219ENST00000580540 Q8N377 158 aa9.39□□□□□ -0.91
SREBF1-219ENST00000580540 TEX49A0A1B0GTD5 131 aa9.38□□□□□ -0.91
SREBF1-219ENST00000580540 A4D1N5 150 aa9.38□□□□□ -0.91
SREBF1-219ENST00000580540 SLC25A20O43772 301 aa9.38□□□□□ -0.91
SREBF1-219ENST00000580540 HIST1H4GQ99525 98 aa9.36□□□□□ -0.91
SREBF1-219ENST00000580540 MUC2Q02817 5179 aa9.35□□□□□ -0.91
SREBF1-219ENST00000580540 COX8AP10176 69 aa9.35□□□□□ -0.91
SREBF1-219ENST00000580540 VAMP3Q15836 100 aa9.35□□□□□ -0.91
SREBF1-219ENST00000580540 C12orf57Q99622 126 aa9.35□□□□□ -0.91
SREBF1-219ENST00000580540 MUC17Q685J3 4493 aa9.35□□□□□ -0.91
SREBF1-219ENST00000580540 NHP2Q9NX24 153 aaKnown RBP9.34□□□□□ -0.91
SREBF1-219ENST00000580540 KRTAP13-3Q3SY46 172 aa9.33□□□□□ -0.92
SREBF1-219ENST00000580540 C14orf144Q96I85 54 aa9.32□□□□□ -0.92
SREBF1-219ENST00000580540 PRO1933Q9H354 126 aa9.32□□□□□ -0.92
SREBF1-219ENST00000580540 PAM16Q9Y3D7 125 aa9.32□□□□□ -0.92
SREBF1-219ENST00000580540 LINC01547P58512 204 aaPredicted RBP9.31□□□□□ -0.92
SREBF1-219ENST00000580540 SMIM29Q86T20 159 aa9.31□□□□□ -0.92
SREBF1-219ENST00000580540 IGLV5-48A0A075B6I7 105 aa9.3□□□□□ -0.92
SREBF1-219ENST00000580540 SPATA45Q537H7 98 aa9.3□□□□□ -0.92
SREBF1-219ENST00000580540 LIMD2Q9BT23 127 aa9.3□□□□□ -0.92
SREBF1-219ENST00000580540 DLEU1O43261 78 aa9.29□□□□□ -0.92
SREBF1-219ENST00000580540 A0A0U1RQV1 116 aa9.28□□□□□ -0.92
SREBF1-219ENST00000580540 LINC00575Q6W349 94 aa9.28□□□□□ -0.92
SREBF1-219ENST00000580540 VAMP8Q9BV40 100 aa9.28□□□□□ -0.92
SREBF1-219ENST00000580540 A0A0G2JQZ4 141 aa9.27□□□□□ -0.93
SREBF1-219ENST00000580540 H7C2G1 150 aa9.27□□□□□ -0.93
SREBF1-219ENST00000580540 hADV29S1A0JD25 119 aa9.26□□□□□ -0.93
SREBF1-219ENST00000580540 CD164Q04900 197 aa9.25□□□□□ -0.93
SREBF1-219ENST00000580540 F8WEM9 126 aa9.24□□□□□ -0.93
SREBF1-219ENST00000580540 Q6ZQY7 126 aa9.24□□□□□ -0.93
SREBF1-219ENST00000580540 RAB37Q96AX2 223 aa9.24□□□□□ -0.93
SREBF1-219ENST00000580540 BVES-AS1Q5T3Y7 98 aa9.22□□□□□ -0.93
SREBF1-219ENST00000580540 HIGD1BQ9P298 99 aa9.22□□□□□ -0.93
SREBF1-219ENST00000580540 CFC1BP0CG36 223 aa9.21□□□□□ -0.94
SREBF1-219ENST00000580540 CFC1P0CG37 223 aa9.21□□□□□ -0.94
SREBF1-219ENST00000580540 SEC61BP60468 96 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms