RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 KRTAP13-3Q3SY46 172 aa8.21□□□□□ -1.1
SMARCE1-216ENST00000580419 Q9BRP9 147 aa8.21□□□□□ -1.1
SMARCE1-216ENST00000580419 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.1
SMARCE1-216ENST00000580419 DAND5Q8N907 189 aa8.2□□□□□ -1.1
SMARCE1-216ENST00000580419 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
SMARCE1-216ENST00000580419 TIMM17BO60830 172 aa8.19□□□□□ -1.1
SMARCE1-216ENST00000580419 FABP4P15090 132 aa8.19□□□□□ -1.1
SMARCE1-216ENST00000580419 S100A7L2Q5SY68 101 aa8.19□□□□□ -1.1
SMARCE1-216ENST00000580419 GAGE2AQ6NT46 116 aa8.19□□□□□ -1.1
SMARCE1-216ENST00000580419 TRAV23DV6A0A075B6W5 121 aa8.18□□□□□ -1.1
SMARCE1-216ENST00000580419 ERC2-IT1O76042 136 aa8.18□□□□□ -1.1
SMARCE1-216ENST00000580419 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
SMARCE1-216ENST00000580419 SLC25A20O43772 301 aa8.17□□□□□ -1.1
SMARCE1-216ENST00000580419 ZNF73O43830 326 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-216ENST00000580419 ASB16-AS1Q495Z4 193 aa8.17□□□□□ -1.1
SMARCE1-216ENST00000580419 Q8N377 158 aa8.17□□□□□ -1.1
SMARCE1-216ENST00000580419 SPANXCQ9NY87 97 aa8.17□□□□□ -1.1
SMARCE1-216ENST00000580419 SYS1-DBNDD2H3BUS1 97 aa8.16□□□□□ -1.1
SMARCE1-216ENST00000580419 HINT1P49773 126 aaPredicted RBP8.16□□□□□ -1.1
SMARCE1-216ENST00000580419 ADAMTSL4-AS1Q5T5F5 129 aa8.16□□□□□ -1.1
SMARCE1-216ENST00000580419 SOSTDC1Q6X4U4 206 aa8.16□□□□□ -1.1
SMARCE1-216ENST00000580419 MOBPQ13875 183 aa8.15□□□□□ -1.1
SMARCE1-216ENST00000580419 PMCHL2Q9BQD1 86 aa8.15□□□□□ -1.1
SMARCE1-216ENST00000580419 SPRR1BP22528 89 aa8.14□□□□□ -1.11
SMARCE1-216ENST00000580419 LINC01545Q5VT33 79 aa8.14□□□□□ -1.11
SMARCE1-216ENST00000580419 PET117Q6UWS5 81 aa8.14□□□□□ -1.11
SMARCE1-216ENST00000580419 LITAFQ99732 161 aa8.14□□□□□ -1.11
SMARCE1-216ENST00000580419 SLC25A34Q6PIV7 304 aa8.13□□□□□ -1.11
SMARCE1-216ENST00000580419 IGLV9-49A0A0B4J1Y8 123 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 EIF4EBP3O60516 100 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 HIST1H2BKO60814 126 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 HIST1H2BJP06899 126 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 HIST1H2BOP23527 126 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 HIST1H2BBP33778 126 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 HIST1H2BDP58876 126 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 SEC61BP60468 96 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 HIST1H2BCP62807 126 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 HIST2H2BEQ16778 126 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 LINC00518Q8N0U6 118 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 LINC00308Q8TCZ7 52 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 HIST1H2BHQ93079 126 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 HIST1H2BNQ99877 126 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 HIST1H2BMQ99879 126 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 SPANXDQ9BXN6 97 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 DHRS4-AS1Q9P1J3 65 aa8.12□□□□□ -1.11
SMARCE1-216ENST00000580419 SLC7A5P1Q8MH63 180 aa8.11□□□□□ -1.11
SMARCE1-216ENST00000580419 COA6Q5JTJ3 125 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-216ENST00000580419 TRBV7-6A0A0J9YX20 115 aa8.08□□□□□ -1.12
SMARCE1-216ENST00000580419 COPS9Q8WXC6 57 aa8.08□□□□□ -1.12
SMARCE1-216ENST00000580419 AKR1D1P51857 326 aa8.07□□□□□ -1.12
SMARCE1-216ENST00000580419 ZNF815PA8K554 130 aa8.06□□□□□ -1.12
SMARCE1-216ENST00000580419 ELOF1P60002 83 aaKnown RBP8.06□□□□□ -1.12
SMARCE1-216ENST00000580419 CD164Q04900 197 aa8.06□□□□□ -1.12
SMARCE1-216ENST00000580419 Q6ZVH6 145 aa8.06□□□□□ -1.12
SMARCE1-216ENST00000580419 C9orf153Q5TBE3 101 aa8.05□□□□□ -1.12
SMARCE1-216ENST00000580419 LIMD2Q9BT23 127 aa8.05□□□□□ -1.12
SMARCE1-216ENST00000580419 IFITM1P13164 125 aa8.04□□□□□ -1.12
SMARCE1-216ENST00000580419 NPC2P61916 151 aa8.04□□□□□ -1.12
SMARCE1-216ENST00000580419 ST20-AS1Q8NBB2 130 aa8.04□□□□□ -1.12
SMARCE1-216ENST00000580419 C3orf79P0CE67 100 aa8.03□□□□□ -1.12
SMARCE1-216ENST00000580419 Q5XG85 94 aa8.03□□□□□ -1.12
SMARCE1-216ENST00000580419 OR13C6PQ8NH95 151 aa8.03□□□□□ -1.12
SMARCE1-216ENST00000580419 LAMTOR3Q9UHA4 124 aa8.03□□□□□ -1.12
SMARCE1-216ENST00000580419 COX7BP24311 80 aa8.01□□□□□ -1.13
SMARCE1-216ENST00000580419 C6orf99Q4VX62 202 aa8.01□□□□□ -1.13
SMARCE1-216ENST00000580419 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
SMARCE1-216ENST00000580419 TEX49A0A1B0GTD5 131 aa8□□□□□ -1.13
SMARCE1-216ENST00000580419 A0A1B0GWB2 263 aa8□□□□□ -1.13
SMARCE1-216ENST00000580419 A4D1N5 150 aa8□□□□□ -1.13
SMARCE1-216ENST00000580419 C20orf202A1L168 122 aa7.99□□□□□ -1.13
SMARCE1-216ENST00000580419 LINC01547P58512 204 aaPredicted RBP7.99□□□□□ -1.13
SMARCE1-216ENST00000580419 SNRPEP62304 92 aaKnown RBP7.99□□□□□ -1.13
SMARCE1-216ENST00000580419 IGLV5-48A0A075B6I7 105 aa7.98□□□□□ -1.13
SMARCE1-216ENST00000580419 SCGB1D4Q6XE38 83 aa7.98□□□□□ -1.13
SMARCE1-216ENST00000580419 PRO1933Q9H354 126 aa7.98□□□□□ -1.13
SMARCE1-216ENST00000580419 KRTAP4-1Q9BYQ7 146 aa7.97□□□□□ -1.13
SMARCE1-216ENST00000580419 TTTY13Q9BZ97 58 aa7.97□□□□□ -1.13
SMARCE1-216ENST00000580419 TAL2Q16559 108 aa7.96□□□□□ -1.14
SMARCE1-216ENST00000580419 KRTDAPP60985 99 aa7.95□□□□□ -1.14
SMARCE1-216ENST00000580419 NHP2Q9NX24 153 aaKnown RBP7.95□□□□□ -1.14
SMARCE1-216ENST00000580419 TRAV13-2A0A0B4J235 113 aa7.94□□□□□ -1.14
SMARCE1-216ENST00000580419 SMIM29Q86T20 159 aa7.93□□□□□ -1.14
SMARCE1-216ENST00000580419 H7C2G1 150 aa7.92□□□□□ -1.14
SMARCE1-216ENST00000580419 ANKRD39Q53RE8 183 aa7.92□□□□□ -1.14
SMARCE1-216ENST00000580419 A6NDN8 102 aa7.9□□□□□ -1.14
SMARCE1-216ENST00000580419 MUSTN1Q8IVN3 82 aa7.9□□□□□ -1.14
SMARCE1-216ENST00000580419 Q1RN00 199 aa7.89□□□□□ -1.15
SMARCE1-216ENST00000580419 PCP2Q8IVA1 136 aa7.88□□□□□ -1.15
SMARCE1-216ENST00000580419 KRTAP4-12Q9BQ66 201 aa7.88□□□□□ -1.15
SMARCE1-216ENST00000580419 DEFB105AQ8NG35 78 aa7.87□□□□□ -1.15
SMARCE1-216ENST00000580419 VAMP3Q15836 100 aa7.86□□□□□ -1.15
SMARCE1-216ENST00000580419 C1orf195Q5TG92 126 aa7.86□□□□□ -1.15
SMARCE1-216ENST00000580419 HRCT1Q6UXD1 115 aa7.86□□□□□ -1.15
SMARCE1-216ENST00000580419 SMIM11BQ8TCY0 68 aa7.86□□□□□ -1.15
SMARCE1-216ENST00000580419 KRTAP19-2Q3LHN2 52 aa7.85□□□□□ -1.15
SMARCE1-216ENST00000580419 IGLV8-61A0A075B6I0 122 aa7.83□□□□□ -1.16
SMARCE1-216ENST00000580419 TCL1BO95988 128 aa7.83□□□□□ -1.16
SMARCE1-216ENST00000580419 ATOH7Q8N100 152 aa7.83□□□□□ -1.16
SMARCE1-216ENST00000580419 PCOTHQ58A44 107 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms