RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 IGKV3-7A0A075B6H7 116 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 TRGV2A0A075B6R0 118 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 TRBV7-1A0A0A6YYK4 115 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 TEX49A0A1B0GTD5 131 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 HIGD1CA8MV81 97 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 J3QRE1 110 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 M0R2N4 97 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 ATOX1O00244 68 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 INE1O15225 51 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 MRPS14O60783 128 aaKnown RBP1.53□□□□□ -2.16
KPNB1-208ENST00000580019 SIX6O95475 246 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 IGLV3-1P01715 115 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 IGLC1P0CG04 106 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 EFNA4P52798 201 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 GNG11P61952 73 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 SNRPFP62306 86 aaKnown RBP1.53□□□□□ -2.16
KPNB1-208ENST00000580019 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 WFDC10AQ9H1F0 79 aa1.53□□□□□ -2.16
KPNB1-208ENST00000580019 HMCN2Q8NDA2 5059 aa1.52□□□□□ -2.17
KPNB1-208ENST00000580019 RNF213Q63HN8 5207 aa1.52□□□□□ -2.17
KPNB1-208ENST00000580019 CLPSL1A2RUU4 121 aa1.52□□□□□ -2.17
KPNB1-208ENST00000580019 GYPAP02724 150 aa1.52□□□□□ -2.17
KPNB1-208ENST00000580019 SPATA45Q537H7 98 aa1.52□□□□□ -2.17
KPNB1-208ENST00000580019 PYY3Q5JQD4 70 aa1.52□□□□□ -2.17
KPNB1-208ENST00000580019 Q6ZRN7 208 aaPredicted RBP1.52□□□□□ -2.17
KPNB1-208ENST00000580019 DEFB106AQ8N104 65 aa1.52□□□□□ -2.17
KPNB1-208ENST00000580019 AMELYQ99218 206 aa1.52□□□□□ -2.17
KPNB1-208ENST00000580019 PRO1933Q9H354 126 aa1.52□□□□□ -2.17
KPNB1-208ENST00000580019 hADV29S1A0JD25 119 aa1.51□□□□□ -2.17
KPNB1-208ENST00000580019 CRYM-AS1A6NIL9 109 aa1.51□□□□□ -2.17
KPNB1-208ENST00000580019 LY6G6CO95867 125 aa1.51□□□□□ -2.17
KPNB1-208ENST00000580019 UBE2D1P51668 147 aa1.51□□□□□ -2.17
KPNB1-208ENST00000580019 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
KPNB1-208ENST00000580019 BRD3OSQ6XYD6 125 aa1.51□□□□□ -2.17
KPNB1-208ENST00000580019 PPP1R1CQ8WVI7 109 aa1.51□□□□□ -2.17
KPNB1-208ENST00000580019 MGST2Q99735 147 aa1.51□□□□□ -2.17
KPNB1-208ENST00000580019 BET1LQ9NYM9 111 aa1.51□□□□□ -2.17
KPNB1-208ENST00000580019 FAT1Q14517 4588 aa1.51□□□□□ -2.17
KPNB1-208ENST00000580019 SRRM2Q9UQ35 2752 aaKnown RBP1.51□□□□□ -2.17
KPNB1-208ENST00000580019 ARFGEF3Q5TH69 2177 aa1.5□□□□□ -2.17
KPNB1-208ENST00000580019 LOC110117498A0A087WWA1 95 aa1.5□□□□□ -2.17
KPNB1-208ENST00000580019 NDUFC1O43677 76 aa1.5□□□□□ -2.17
KPNB1-208ENST00000580019 SPINT3P49223 89 aa1.5□□□□□ -2.17
KPNB1-208ENST00000580019 SEC11AP67812 179 aa1.5□□□□□ -2.17
KPNB1-208ENST00000580019 SSBP1Q04837 148 aaKnown RBP1.5□□□□□ -2.17
KPNB1-208ENST00000580019 TSLPQ969D9 159 aa1.5□□□□□ -2.17
KPNB1-208ENST00000580019 ZNF625Q96I27 306 aaPredicted RBP1.5□□□□□ -2.17
KPNB1-208ENST00000580019 NPVFQ9HCQ7 196 aa1.5□□□□□ -2.17
KPNB1-208ENST00000580019 UQCRHLA0A096LP55 91 aa1.49□□□□□ -2.17
KPNB1-208ENST00000580019 TRBV7-7A0A0K0K1E9 115 aa1.49□□□□□ -2.17
KPNB1-208ENST00000580019 SFT2D2O95562 160 aa1.49□□□□□ -2.17
KPNB1-208ENST00000580019 C10orf128Q5T292 105 aa1.49□□□□□ -2.17
KPNB1-208ENST00000580019 GDF5OSQ5U4N7 250 aa1.49□□□□□ -2.17
KPNB1-208ENST00000580019 LINC00474Q9P2X8 69 aa1.49□□□□□ -2.17
KPNB1-208ENST00000580019 UQCR10Q9UDW1 63 aa1.49□□□□□ -2.17
KPNB1-208ENST00000580019 TRBV7-3A0A075B6L6 115 aa1.48□□□□□ -2.17
KPNB1-208ENST00000580019 K7EP34 96 aa1.48□□□□□ -2.17
KPNB1-208ENST00000580019 ELOF1P60002 83 aaKnown RBP1.48□□□□□ -2.17
KPNB1-208ENST00000580019 FAM74A4Q5TZK3 123 aa1.48□□□□□ -2.17
KPNB1-208ENST00000580019 C20orf197Q8N268 126 aa1.48□□□□□ -2.17
KPNB1-208ENST00000580019 FAM213BQ8TBF2 198 aa1.48□□□□□ -2.17
KPNB1-208ENST00000580019 FAM167A-AS1Q96KT0 104 aa1.48□□□□□ -2.17
KPNB1-208ENST00000580019 TRGV9Q99603 122 aa1.48□□□□□ -2.17
KPNB1-208ENST00000580019 TRBV6-7A0A0A0MS04 114 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 LOC101927531A0A1B0GV80 90 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 LYNX1G3V0Z9 82 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 H0YGG7 62 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 H3BQF6 201 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 COX6CP09669 75 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 LYNX1P0DP58 116 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 CCL3L1P16619 93 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 FAUP35544 74 aaKnown RBP1.47□□□□□ -2.17
KPNB1-208ENST00000580019 PEA15Q15121 130 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 ZNF56Q15929 161 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 XAF1Q6GPH4 301 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 SERP2Q8N6R1 65 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 PROK2Q9HC23 129 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 MANBALQ9NQG1 85 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 CACFD1Q9UGQ2 172 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 LENEPQ9Y5L5 61 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 FAT3Q8TDW7 4589 aa1.47□□□□□ -2.17
KPNB1-208ENST00000580019 FSIP2Q5CZC0 6907 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 DOCK11Q5JSL3 2073 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 FAT4Q6V0I7 4981 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 IGKV2-40A0A087WW87 121 aaPredicted RBP1.46□□□□□ -2.18
KPNB1-208ENST00000580019 CYB5AP00167 134 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 IGKV2D-40P01614 121 aaPredicted RBP1.46□□□□□ -2.18
KPNB1-208ENST00000580019 UBE2D3P61077 147 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 UBE2D2P62837 147 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 FXYD3Q14802 87 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 WFDC9Q8NEX5 89 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 COX7B2Q8TF08 81 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 DYNLRB1Q9NP97 96 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 PRO1854Q9UHT4 67 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 RABAC1Q9UI14 185 aa1.46□□□□□ -2.18
KPNB1-208ENST00000580019 IGKV3D-7A0A0C4DH55 119 aa1.45□□□□□ -2.18
KPNB1-208ENST00000580019 IGKV3OR2-268A0A0C4DH90 116 aa1.45□□□□□ -2.18
KPNB1-208ENST00000580019 NBDYA0A0U1RRE5 68 aa1.45□□□□□ -2.18
KPNB1-208ENST00000580019 LOC285095A0A1B0GVY8 99 aa1.45□□□□□ -2.18
KPNB1-208ENST00000580019 IGKV2-29A2NJV5 120 aaPredicted RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms