RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 C9orf153Q5TBE3 101 aa9.94□□□□□ -0.82
SLC9A3R1-203ENST00000578958 ADAMTSL4-AS1Q5T5F5 129 aa9.93□□□□□ -0.82
SLC9A3R1-203ENST00000578958 SYS1-DBNDD2H3BUS1 97 aa9.92□□□□□ -0.82
SLC9A3R1-203ENST00000578958 SOSTDC1Q6X4U4 206 aa9.92□□□□□ -0.82
SLC9A3R1-203ENST00000578958 OR13C6PQ8NH95 151 aa9.92□□□□□ -0.82
SLC9A3R1-203ENST00000578958 RPS29P62273 56 aaKnown RBP9.9□□□□□ -0.82
SLC9A3R1-203ENST00000578958 SLC25A20O43772 301 aa9.89□□□□□ -0.83
SLC9A3R1-203ENST00000578958 KRTAP13-3Q3SY46 172 aa9.89□□□□□ -0.83
SLC9A3R1-203ENST00000578958 SPANXCQ9NY87 97 aa9.89□□□□□ -0.83
SLC9A3R1-203ENST00000578958 EIF4EBP3O60516 100 aaPredicted RBP9.88□□□□□ -0.83
SLC9A3R1-203ENST00000578958 Q8N377 158 aa9.87□□□□□ -0.83
SLC9A3R1-203ENST00000578958 LINC00308Q8TCZ7 52 aa9.87□□□□□ -0.83
SLC9A3R1-203ENST00000578958 FAT4Q6V0I7 4981 aa9.87□□□□□ -0.83
SLC9A3R1-203ENST00000578958 C5orf52A6NGY3 159 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 ZNF815PA8K554 130 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 HIST1H2BKO60814 126 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 TIMM17BO60830 172 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 HIST1H2BJP06899 126 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 HIST1H2BOP23527 126 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 HIST1H2BBP33778 126 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 HIST1H2BDP58876 126 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 HIST1H2BCP62807 126 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 HIST2H2BEQ16778 126 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 PET117Q6UWS5 81 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 ST20-AS1Q8NBB2 130 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 HIST1H2BHQ93079 126 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 HIST1H2BNQ99877 126 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 HIST1H2BMQ99879 126 aa9.86□□□□□ -0.83
SLC9A3R1-203ENST00000578958 SLC25A34Q6PIV7 304 aa9.85□□□□□ -0.83
SLC9A3R1-203ENST00000578958 SEC61BP60468 96 aaKnown RBP9.84□□□□□ -0.83
SLC9A3R1-203ENST00000578958 LINC01545Q5VT33 79 aa9.84□□□□□ -0.83
SLC9A3R1-203ENST00000578958 DHRS4-AS1Q9P1J3 65 aa9.84□□□□□ -0.83
SLC9A3R1-203ENST00000578958 LINC00518Q8N0U6 118 aa9.83□□□□□ -0.84
SLC9A3R1-203ENST00000578958 SPANXDQ9BXN6 97 aa9.83□□□□□ -0.84
SLC9A3R1-203ENST00000578958 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
SLC9A3R1-203ENST00000578958 LITAFQ99732 161 aa9.82□□□□□ -0.84
SLC9A3R1-203ENST00000578958 LCE2AQ5TA79 106 aaPredicted RBP9.81□□□□□ -0.84
SLC9A3R1-203ENST00000578958 KRTDAPP60985 99 aa9.8□□□□□ -0.84
SLC9A3R1-203ENST00000578958 SCGB1D4Q6XE38 83 aa9.8□□□□□ -0.84
SLC9A3R1-203ENST00000578958 LAMTOR3Q9UHA4 124 aa9.8□□□□□ -0.84
SLC9A3R1-203ENST00000578958 C3orf79P0CE67 100 aa9.79□□□□□ -0.84
SLC9A3R1-203ENST00000578958 COX7BP24311 80 aa9.79□□□□□ -0.84
SLC9A3R1-203ENST00000578958 COPS9Q8WXC6 57 aa9.79□□□□□ -0.84
SLC9A3R1-203ENST00000578958 TTTY13Q9BZ97 58 aa9.79□□□□□ -0.84
SLC9A3R1-203ENST00000578958 C20orf202A1L168 122 aa9.78□□□□□ -0.84
SLC9A3R1-203ENST00000578958 TAL2Q16559 108 aa9.78□□□□□ -0.84
SLC9A3R1-203ENST00000578958 HRCT1Q6UXD1 115 aa9.78□□□□□ -0.84
SLC9A3R1-203ENST00000578958 LIMD2Q9BT23 127 aa9.78□□□□□ -0.84
SLC9A3R1-203ENST00000578958 C6orf99Q4VX62 202 aa9.77□□□□□ -0.85
SLC9A3R1-203ENST00000578958 SPRR1BP22528 89 aa9.76□□□□□ -0.85
SLC9A3R1-203ENST00000578958 DEFB105AQ8NG35 78 aa9.76□□□□□ -0.85
SLC9A3R1-203ENST00000578958 KRTAP9-2Q9BYQ4 174 aa9.76□□□□□ -0.85
SLC9A3R1-203ENST00000578958 ELOF1P60002 83 aaKnown RBP9.75□□□□□ -0.85
SLC9A3R1-203ENST00000578958 LINC01547P58512 204 aaPredicted RBP9.73□□□□□ -0.85
SLC9A3R1-203ENST00000578958 A6NDN8 102 aa9.72□□□□□ -0.85
SLC9A3R1-203ENST00000578958 Q1RN00 199 aa9.72□□□□□ -0.85
SLC9A3R1-203ENST00000578958 IFITM1P13164 125 aa9.71□□□□□ -0.86
SLC9A3R1-203ENST00000578958 TEX49A0A1B0GTD5 131 aa9.7□□□□□ -0.86
SLC9A3R1-203ENST00000578958 AKR1D1P51857 326 aa9.7□□□□□ -0.86
SLC9A3R1-203ENST00000578958 COA6Q5JTJ3 125 aaKnown RBP9.7□□□□□ -0.86
SLC9A3R1-203ENST00000578958 XP32Q5T750 250 aa9.7□□□□□ -0.86
SLC9A3R1-203ENST00000578958 PRO1933Q9H354 126 aa9.7□□□□□ -0.86
SLC9A3R1-203ENST00000578958 TRBV7-6A0A0J9YX20 115 aa9.69□□□□□ -0.86
SLC9A3R1-203ENST00000578958 Q6ZVH6 145 aa9.69□□□□□ -0.86
SLC9A3R1-203ENST00000578958 ATOH7Q8N100 152 aa9.69□□□□□ -0.86
SLC9A3R1-203ENST00000578958 A0A1B0GWB2 263 aa9.68□□□□□ -0.86
SLC9A3R1-203ENST00000578958 ANKRD39Q53RE8 183 aa9.68□□□□□ -0.86
SLC9A3R1-203ENST00000578958 H7C2G1 150 aa9.67□□□□□ -0.86
SLC9A3R1-203ENST00000578958 CD164Q04900 197 aa9.66□□□□□ -0.86
SLC9A3R1-203ENST00000578958 MUSTN1Q8IVN3 82 aa9.66□□□□□ -0.86
SLC9A3R1-203ENST00000578958 KRTAP4-1Q9BYQ7 146 aa9.65□□□□□ -0.86
SLC9A3R1-203ENST00000578958 TRAV13-2A0A0B4J235 113 aa9.64□□□□□ -0.87
SLC9A3R1-203ENST00000578958 A4D1N5 150 aa9.64□□□□□ -0.87
SLC9A3R1-203ENST00000578958 C9orf92A6NGG3 77 aa9.64□□□□□ -0.87
SLC9A3R1-203ENST00000578958 PCP2Q8IVA1 136 aa9.64□□□□□ -0.87
SLC9A3R1-203ENST00000578958 NHP2Q9NX24 153 aaKnown RBP9.64□□□□□ -0.87
SLC9A3R1-203ENST00000578958 SNRPEP62304 92 aaKnown RBP9.61□□□□□ -0.87
SLC9A3R1-203ENST00000578958 IGLV5-48A0A075B6I7 105 aa9.59□□□□□ -0.87
SLC9A3R1-203ENST00000578958 VAMP3Q15836 100 aa9.59□□□□□ -0.87
SLC9A3R1-203ENST00000578958 SMIM29Q86T20 159 aa9.59□□□□□ -0.87
SLC9A3R1-203ENST00000578958 SMIM11BQ8TCY0 68 aa9.58□□□□□ -0.88
SLC9A3R1-203ENST00000578958 HSBP1L1C9JCN9 74 aa9.57□□□□□ -0.88
SLC9A3R1-203ENST00000578958 S100A2P29034 98 aa9.57□□□□□ -0.88
SLC9A3R1-203ENST00000578958 PCOTHQ58A44 107 aa9.57□□□□□ -0.88
SLC9A3R1-203ENST00000578958 IGLV8-61A0A075B6I0 122 aa9.56□□□□□ -0.88
SLC9A3R1-203ENST00000578958 F8WEM9 126 aa9.56□□□□□ -0.88
SLC9A3R1-203ENST00000578958 Q5XG85 94 aa9.55□□□□□ -0.88
SLC9A3R1-203ENST00000578958 A0A0G2JQZ4 141 aa9.54□□□□□ -0.88
SLC9A3R1-203ENST00000578958 TCL1BO95988 128 aa9.53□□□□□ -0.88
SLC9A3R1-203ENST00000578958 C1orf195Q5TG92 126 aa9.52□□□□□ -0.89
SLC9A3R1-203ENST00000578958 hADV29S1A0JD25 119 aa9.49□□□□□ -0.89
SLC9A3R1-203ENST00000578958 HIST3H2BBQ8N257 126 aa9.49□□□□□ -0.89
SLC9A3R1-203ENST00000578958 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
SLC9A3R1-203ENST00000578958 KRTAP9-6A0A140TA67 174 aa9.48□□□□□ -0.89
SLC9A3R1-203ENST00000578958 S100A6P06703 90 aa9.48□□□□□ -0.89
SLC9A3R1-203ENST00000578958 LINC00575Q6W349 94 aa9.48□□□□□ -0.89
SLC9A3R1-203ENST00000578958 Q6ZQY7 126 aa9.47□□□□□ -0.89
SLC9A3R1-203ENST00000578958 Q6JHZ5 121 aa9.44□□□□□ -0.9
SLC9A3R1-203ENST00000578958 HIST1H4GQ99525 98 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms