RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	ZNF706	Q9Y5V0	76 aa	Predicted RBP	8	□□□□□ -1.13
CSNK1D-208	ENST00000578501	S100A2	P29034	98 aa		7.99	□□□□□ -1.13
CSNK1D-208	ENST00000578501	ANKRD39	Q53RE8	183 aa		7.99	□□□□□ -1.13
CSNK1D-208	ENST00000578501	HIST1H2BL	Q99880	126 aa		7.99	□□□□□ -1.13
CSNK1D-208	ENST00000578501	CBY1	Q9Y3M2	126 aa		7.99	□□□□□ -1.13
CSNK1D-208	ENST00000578501	ATOH7	Q8N100	152 aa		7.98	□□□□□ -1.13
CSNK1D-208	ENST00000578501	SMCR5	Q8TEV8	140 aa		7.98	□□□□□ -1.13
CSNK1D-208	ENST00000578501	TRAV23DV6	A0A075B6W5	121 aa		7.97	□□□□□ -1.13
CSNK1D-208	ENST00000578501	S100A6	P06703	90 aa		7.97	□□□□□ -1.13
CSNK1D-208	ENST00000578501	CTAG1A	P78358	180 aa		7.97	□□□□□ -1.13
CSNK1D-208	ENST00000578501	SCGB1D4	Q6XE38	83 aa		7.97	□□□□□ -1.13
CSNK1D-208	ENST00000578501		Q6ZRX8	168 aa		7.97	□□□□□ -1.13
CSNK1D-208	ENST00000578501	SPANXD	Q9BXN6	97 aa		7.97	□□□□□ -1.13
CSNK1D-208	ENST00000578501	PPDPF	Q9H3Y8	114 aa		7.97	□□□□□ -1.13
CSNK1D-208	ENST00000578501	ZNF73	O43830	326 aa	Predicted RBP	7.95	□□□□□ -1.14
CSNK1D-208	ENST00000578501	LINC00483	Q53H64	154 aa		7.95	□□□□□ -1.14
CSNK1D-208	ENST00000578501		Q6ZVH6	145 aa		7.95	□□□□□ -1.14
CSNK1D-208	ENST00000578501	LINC00518	Q8N0U6	118 aa		7.95	□□□□□ -1.14
CSNK1D-208	ENST00000578501	LINC00304	Q8N9R0	145 aa		7.95	□□□□□ -1.14
CSNK1D-208	ENST00000578501	COPS9	Q8WXC6	57 aa		7.95	□□□□□ -1.14
CSNK1D-208	ENST00000578501	TSPAN13	O95857	204 aa		7.94	□□□□□ -1.14
CSNK1D-208	ENST00000578501	IFITM1	P13164	125 aa		7.94	□□□□□ -1.14
CSNK1D-208	ENST00000578501	JOSD1	Q15040	202 aa	Predicted RBP	7.94	□□□□□ -1.14
CSNK1D-208	ENST00000578501		Q9BRP9	147 aa		7.94	□□□□□ -1.14
CSNK1D-208	ENST00000578501	PCP2	Q8IVA1	136 aa		7.93	□□□□□ -1.14
CSNK1D-208	ENST00000578501	C3orf22	Q8N5N4	141 aa		7.93	□□□□□ -1.14
CSNK1D-208	ENST00000578501	ERC2-IT1	O76042	136 aa		7.92	□□□□□ -1.14
CSNK1D-208	ENST00000578501	HINT1	P49773	126 aa	Predicted RBP	7.92	□□□□□ -1.14
CSNK1D-208	ENST00000578501	OR13C6P	Q8NH95	151 aa		7.92	□□□□□ -1.14
CSNK1D-208	ENST00000578501	C5orf52	A6NGY3	159 aa		7.91	□□□□□ -1.14
CSNK1D-208	ENST00000578501	HSBP1L1	C9JCN9	74 aa		7.91	□□□□□ -1.14
CSNK1D-208	ENST00000578501	PRR4	Q16378	134 aa		7.91	□□□□□ -1.14
CSNK1D-208	ENST00000578501	SPAG11A	Q6PDA7	123 aa		7.91	□□□□□ -1.14
CSNK1D-208	ENST00000578501	GAGE2A	Q6NT46	116 aa		7.89	□□□□□ -1.15
CSNK1D-208	ENST00000578501	LPA	P08519	4548 aa		7.89	□□□□□ -1.15
CSNK1D-208	ENST00000578501	MUSTN1	Q8IVN3	82 aa		7.88	□□□□□ -1.15
CSNK1D-208	ENST00000578501	DHRS4-AS1	Q9P1J3	65 aa		7.87	□□□□□ -1.15
CSNK1D-208	ENST00000578501	TRBV7-6	A0A0J9YX20	115 aa		7.85	□□□□□ -1.15
CSNK1D-208	ENST00000578501	SCGB1D1	O95968	90 aa		7.85	□□□□□ -1.15
CSNK1D-208	ENST00000578501	ELOF1	P60002	83 aa	Known RBP	7.85	□□□□□ -1.15
CSNK1D-208	ENST00000578501	C6orf99	Q4VX62	202 aa		7.85	□□□□□ -1.15
CSNK1D-208	ENST00000578501	C4orf48	Q5BLP8	95 aa		7.85	□□□□□ -1.15
CSNK1D-208	ENST00000578501	SSBP3-AS1	Q7Z2R9	100 aa		7.85	□□□□□ -1.15
CSNK1D-208	ENST00000578501		Q8NBF4	154 aa		7.85	□□□□□ -1.15
CSNK1D-208	ENST00000578501	LCE2A	Q5TA79	106 aa	Predicted RBP	7.84	□□□□□ -1.15
CSNK1D-208	ENST00000578501	TRAV13-2	A0A0B4J235	113 aa		7.83	□□□□□ -1.16
CSNK1D-208	ENST00000578501		A6NDN8	102 aa		7.83	□□□□□ -1.16
CSNK1D-208	ENST00000578501	SPINK1	P00995	79 aa		7.83	□□□□□ -1.16
CSNK1D-208	ENST00000578501	COX7B	P24311	80 aa		7.83	□□□□□ -1.16
CSNK1D-208	ENST00000578501	ST20-AS1	Q8NBB2	130 aa		7.83	□□□□□ -1.16
CSNK1D-208	ENST00000578501	SPRR1B	P22528	89 aa		7.82	□□□□□ -1.16
CSNK1D-208	ENST00000578501	MOBP	Q13875	183 aa		7.82	□□□□□ -1.16
CSNK1D-208	ENST00000578501	IGLV9-49	A0A0B4J1Y8	123 aa		7.81	□□□□□ -1.16
CSNK1D-208	ENST00000578501		A0A1B0GWB2	263 aa		7.81	□□□□□ -1.16
CSNK1D-208	ENST00000578501	RETNLB	Q9BQ08	111 aa		7.81	□□□□□ -1.16
CSNK1D-208	ENST00000578501	MUC2	Q02817	5179 aa		7.81	□□□□□ -1.16
CSNK1D-208	ENST00000578501		A4D1N5	150 aa		7.8	□□□□□ -1.16
CSNK1D-208	ENST00000578501	COX8A	P10176	69 aa		7.8	□□□□□ -1.16
CSNK1D-208	ENST00000578501	SLC25A34	Q6PIV7	304 aa		7.8	□□□□□ -1.16
CSNK1D-208	ENST00000578501	DLEU1	O43261	78 aa		7.79	□□□□□ -1.16
CSNK1D-208	ENST00000578501	RPS29	P62273	56 aa	Known RBP	7.79	□□□□□ -1.16
CSNK1D-208	ENST00000578501	TMA7	Q9Y2S6	64 aa	Known RBP	7.78	□□□□□ -1.16
CSNK1D-208	ENST00000578501	IGLV7-46	A0A075B6I9	117 aa		7.77	□□□□□ -1.17
CSNK1D-208	ENST00000578501	TPRXL	Q17RH7	258 aa		7.77	□□□□□ -1.17
CSNK1D-208	ENST00000578501	FP248	Q71RG6	208 aa	Predicted RBP	7.77	□□□□□ -1.17
CSNK1D-208	ENST00000578501	SMIM11B	Q8TCY0	68 aa		7.77	□□□□□ -1.17
CSNK1D-208	ENST00000578501	C9orf153	Q5TBE3	101 aa		7.76	□□□□□ -1.17
CSNK1D-208	ENST00000578501	TEX49	A0A1B0GTD5	131 aa		7.75	□□□□□ -1.17
CSNK1D-208	ENST00000578501	LAMTOR3	Q9UHA4	124 aa		7.75	□□□□□ -1.17
CSNK1D-208	ENST00000578501	TAL2	Q16559	108 aa		7.74	□□□□□ -1.17
CSNK1D-208	ENST00000578501	HIST1H4G	Q99525	98 aa		7.74	□□□□□ -1.17
CSNK1D-208	ENST00000578501	NHP2	Q9NX24	153 aa	Known RBP	7.74	□□□□□ -1.17
CSNK1D-208	ENST00000578501	IGLV5-48	A0A075B6I7	105 aa		7.73	□□□□□ -1.17
CSNK1D-208	ENST00000578501	VAMP3	Q15836	100 aa		7.73	□□□□□ -1.17
CSNK1D-208	ENST00000578501		Q8N377	158 aa		7.73	□□□□□ -1.17
CSNK1D-208	ENST00000578501	PAM16	Q9Y3D7	125 aa		7.73	□□□□□ -1.17
CSNK1D-208	ENST00000578501	FAT4	Q6V0I7	4981 aa		7.73	□□□□□ -1.17
CSNK1D-208	ENST00000578501	SPATA45	Q537H7	98 aa		7.72	□□□□□ -1.17
CSNK1D-208	ENST00000578501	DEFB105A	Q8NG35	78 aa		7.72	□□□□□ -1.17
CSNK1D-208	ENST00000578501	VAMP8	Q9BV40	100 aa		7.72	□□□□□ -1.17
CSNK1D-208	ENST00000578501	HIGD1B	Q9P298	99 aa		7.72	□□□□□ -1.17
CSNK1D-208	ENST00000578501	SLC25A20	O43772	301 aa		7.71	□□□□□ -1.18
CSNK1D-208	ENST00000578501	LINC01547	P58512	204 aa	Predicted RBP	7.71	□□□□□ -1.18
CSNK1D-208	ENST00000578501	C14orf144	Q96I85	54 aa		7.71	□□□□□ -1.18
CSNK1D-208	ENST00000578501	SMIM29	Q86T20	159 aa		7.7	□□□□□ -1.18
CSNK1D-208	ENST00000578501	CDIP1	Q9H305	208 aa		7.7	□□□□□ -1.18
CSNK1D-208	ENST00000578501	LINC00575	Q6W349	94 aa		7.69	□□□□□ -1.18
CSNK1D-208	ENST00000578501	CD164	Q04900	197 aa		7.68	□□□□□ -1.18
CSNK1D-208	ENST00000578501		Q1RN00	199 aa		7.68	□□□□□ -1.18
CSNK1D-208	ENST00000578501	C12orf57	Q99622	126 aa		7.67	□□□□□ -1.18
CSNK1D-208	ENST00000578501	PRO1933	Q9H354	126 aa		7.67	□□□□□ -1.18
CSNK1D-208	ENST00000578501	CFC1B	P0CG36	223 aa		7.66	□□□□□ -1.18
CSNK1D-208	ENST00000578501	CFC1	P0CG37	223 aa		7.66	□□□□□ -1.18
CSNK1D-208	ENST00000578501	KRTAP13-3	Q3SY46	172 aa		7.66	□□□□□ -1.18
CSNK1D-208	ENST00000578501	BVES-AS1	Q5T3Y7	98 aa		7.66	□□□□□ -1.18
CSNK1D-208	ENST00000578501	C2orf91	Q6ZV80	131 aa		7.66	□□□□□ -1.18
CSNK1D-208	ENST00000578501	hADV29S1	A0JD25	119 aa		7.65	□□□□□ -1.18
CSNK1D-208	ENST00000578501	LIMD2	Q9BT23	127 aa		7.65	□□□□□ -1.18
CSNK1D-208	ENST00000578501		A0A0B4J2C4	111 aa		7.64	□□□□□ -1.19
CSNK1D-208	ENST00000578501	PYY3	Q5JQD4	70 aa		7.64	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 314.6 ms