RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 DPH3Q96FX2 82 aa5.05□□□□□ -1.6
COPS3-215ENST00000578317 C22orf24Q9Y442 160 aa5.05□□□□□ -1.6
COPS3-215ENST00000578317 FAT1Q14517 4588 aa5.04□□□□□ -1.6
COPS3-215ENST00000578317 IGKV2-28A0A075B6P5 120 aa5.04□□□□□ -1.6
COPS3-215ENST00000578317 FAM168BA1KXE4 195 aa5.04□□□□□ -1.6
COPS3-215ENST00000578317 M0R378 163 aa5.04□□□□□ -1.6
COPS3-215ENST00000578317 IGKV2D-28P01615 120 aa5.04□□□□□ -1.6
COPS3-215ENST00000578317 FXYD2P54710 66 aa5.04□□□□□ -1.6
COPS3-215ENST00000578317 TRAV13-2A0A0B4J235 113 aa5.03□□□□□ -1.6
COPS3-215ENST00000578317 A0A0B4J2C4 111 aa5.03□□□□□ -1.6
COPS3-215ENST00000578317 A0A1B0GWB2 263 aa5.03□□□□□ -1.6
COPS3-215ENST00000578317 CFC1BP0CG36 223 aa5.03□□□□□ -1.6
COPS3-215ENST00000578317 CFC1P0CG37 223 aa5.03□□□□□ -1.6
COPS3-215ENST00000578317 PRR3P79522 188 aaKnown RBP5.03□□□□□ -1.6
COPS3-215ENST00000578317 HINT1P49773 126 aaPredicted RBP5.02□□□□□ -1.61
COPS3-215ENST00000578317 MRPL55Q7Z7F7 128 aaKnown RBP5.02□□□□□ -1.61
COPS3-215ENST00000578317 NKAPP1Q8N9T2 125 aa5.02□□□□□ -1.61
COPS3-215ENST00000578317 CIRBP-AS1Q8TBR5 109 aa5.02□□□□□ -1.61
COPS3-215ENST00000578317 TMEM126AQ9H061 195 aa5.02□□□□□ -1.61
COPS3-215ENST00000578317 BIRC6Q9NR09 4857 aa5.02□□□□□ -1.61
COPS3-215ENST00000578317 HSPG2P98160 4391 aa5.01□□□□□ -1.61
COPS3-215ENST00000578317 IGLV6-57P01721 117 aa5.01□□□□□ -1.61
COPS3-215ENST00000578317 LINC00337Q8N6G1 96 aa5.01□□□□□ -1.61
COPS3-215ENST00000578317 PCP4L1A6NKN8 68 aa5.01□□□□□ -1.61
COPS3-215ENST00000578317 M0QXV9 152 aa5.01□□□□□ -1.61
COPS3-215ENST00000578317 SCXQ7RTU7 201 aa5.01□□□□□ -1.61
COPS3-215ENST00000578317 FAM19A5Q7Z5A7 132 aaPredicted RBP5.01□□□□□ -1.61
COPS3-215ENST00000578317 C7orf33Q8WU49 177 aa5.01□□□□□ -1.61
COPS3-215ENST00000578317 LINC00167Q96N53 147 aa5.01□□□□□ -1.61
COPS3-215ENST00000578317 PRO1854Q9UHT4 67 aa5.01□□□□□ -1.61
COPS3-215ENST00000578317 CBY1Q9Y3M2 126 aa5.01□□□□□ -1.61
COPS3-215ENST00000578317 IGLV1-50A0A075B6I6 118 aa5□□□□□ -1.61
COPS3-215ENST00000578317 A6NDN8 102 aa5□□□□□ -1.61
COPS3-215ENST00000578317 XGP55808 180 aa5□□□□□ -1.61
COPS3-215ENST00000578317 S100A7L2Q5SY68 101 aa5□□□□□ -1.61
COPS3-215ENST00000578317 KCNQ1DNQ9H478 68 aa5□□□□□ -1.61
COPS3-215ENST00000578317 NHP2Q9NX24 153 aaKnown RBP5□□□□□ -1.61
COPS3-215ENST00000578317 VPS13BQ7Z7G8 4022 aa5□□□□□ -1.61
COPS3-215ENST00000578317 RYR1P21817 5038 aa4.99□□□□□ -1.61
COPS3-215ENST00000578317 NCR3O14931 201 aa4.99□□□□□ -1.61
COPS3-215ENST00000578317 RAB37Q96AX2 223 aa4.99□□□□□ -1.61
COPS3-215ENST00000578317 SNHG12Q9BXW3 62 aa4.99□□□□□ -1.61
COPS3-215ENST00000578317 TRBV10-3A0A0K0K1G6 114 aa4.98□□□□□ -1.61
COPS3-215ENST00000578317 PHF5AQ7RTV0 110 aaKnown RBP4.98□□□□□ -1.61
COPS3-215ENST00000578317 OR13C6PQ8NH95 151 aa4.98□□□□□ -1.61
COPS3-215ENST00000578317 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
COPS3-215ENST00000578317 KIAA1109Q2LD37 5005 aa4.98□□□□□ -1.61
COPS3-215ENST00000578317 CDK2AP2O75956 126 aa4.97□□□□□ -1.61
COPS3-215ENST00000578317 SPRR1AP35321 89 aa4.97□□□□□ -1.61
COPS3-215ENST00000578317 RPL28P46779 137 aaKnown RBP4.97□□□□□ -1.61
COPS3-215ENST00000578317 TRAV23DV6A0A075B6W5 121 aa4.96□□□□□ -1.62
COPS3-215ENST00000578317 TRBV7-6A0A0J9YX20 115 aa4.96□□□□□ -1.62
COPS3-215ENST00000578317 RPL37AP8A6NKH3 93 aa4.96□□□□□ -1.62
COPS3-215ENST00000578317 RPL13AP40429 203 aaKnown RBP4.96□□□□□ -1.62
COPS3-215ENST00000578317 UBE2BP63146 152 aa4.96□□□□□ -1.62
COPS3-215ENST00000578317 BATFQ16520 125 aa4.96□□□□□ -1.62
COPS3-215ENST00000578317 SMIM11BQ8TCY0 68 aa4.96□□□□□ -1.62
COPS3-215ENST00000578317 KRTAP4-16G5E9R7 235 aaPredicted RBP4.95□□□□□ -1.62
COPS3-215ENST00000578317 K7ERJ3 54 aa4.95□□□□□ -1.62
COPS3-215ENST00000578317 ZNF73O43830 326 aaPredicted RBP4.95□□□□□ -1.62
COPS3-215ENST00000578317 COL5A1-AS1Q5SY13 56 aa4.95□□□□□ -1.62
COPS3-215ENST00000578317 KRTAP11-1Q8IUC1 163 aa4.95□□□□□ -1.62
COPS3-215ENST00000578317 REG3GQ6UW15 175 aa4.94□□□□□ -1.62
COPS3-215ENST00000578317 H0Y9J4 135 aa4.94□□□□□ -1.62
COPS3-215ENST00000578317 TSPAN13O95857 204 aa4.94□□□□□ -1.62
COPS3-215ENST00000578317 VAMP3Q15836 100 aa4.94□□□□□ -1.62
COPS3-215ENST00000578317 C6orf99Q4VX62 202 aa4.94□□□□□ -1.62
COPS3-215ENST00000578317 PSORS1C2Q9UIG4 136 aa4.94□□□□□ -1.62
COPS3-215ENST00000578317 H0YGX0 51 aa4.93□□□□□ -1.62
COPS3-215ENST00000578317 H7C2G1 150 aa4.93□□□□□ -1.62
COPS3-215ENST00000578317 TAX1BP3O14907 124 aa4.93□□□□□ -1.62
COPS3-215ENST00000578317 BCE1O60756 84 aa4.93□□□□□ -1.62
COPS3-215ENST00000578317 HAMPP81172 84 aa4.93□□□□□ -1.62
COPS3-215ENST00000578317 DIRC1Q969H9 104 aa4.93□□□□□ -1.62
COPS3-215ENST00000578317 HERC2O95714 4834 aa4.93□□□□□ -1.62
COPS3-215ENST00000578317 COX6CP09669 75 aa4.92□□□□□ -1.62
COPS3-215ENST00000578317 INAFM2P0DMQ5 153 aa4.92□□□□□ -1.62
COPS3-215ENST00000578317 Q1RN00 199 aa4.92□□□□□ -1.62
COPS3-215ENST00000578317 ETDCA0A1B0GVM5 59 aa4.91□□□□□ -1.62
COPS3-215ENST00000578317 ELOF1P60002 83 aaKnown RBP4.91□□□□□ -1.62
COPS3-215ENST00000578317 KRTAP13-1Q8IUC0 172 aa4.91□□□□□ -1.62
COPS3-215ENST00000578317 COX7BP24311 80 aa4.9□□□□□ -1.62
COPS3-215ENST00000578317 Q6ZRX8 168 aa4.9□□□□□ -1.62
COPS3-215ENST00000578317 KRTAP17-1Q9BYP8 105 aa4.9□□□□□ -1.62
COPS3-215ENST00000578317 IGLV9-49A0A0B4J1Y8 123 aa4.9□□□□□ -1.63
COPS3-215ENST00000578317 A0A1B0GX51 115 aa4.9□□□□□ -1.63
COPS3-215ENST00000578317 ZNF861PO60384 105 aa4.9□□□□□ -1.63
COPS3-215ENST00000578317 PSMB2P49721 201 aa4.9□□□□□ -1.63
COPS3-215ENST00000578317 C1orf137Q5JT78 98 aa4.9□□□□□ -1.63
COPS3-215ENST00000578317 SRRM2Q9UQ35 2752 aaKnown RBP4.89□□□□□ -1.63
COPS3-215ENST00000578317 H3BUT2 72 aa4.89□□□□□ -1.63
COPS3-215ENST00000578317 SMR3BP02814 79 aaPredicted RBP4.89□□□□□ -1.63
COPS3-215ENST00000578317 IGLV7-43P04211 117 aa4.89□□□□□ -1.63
COPS3-215ENST00000578317 SCGB1C2P0DMR2 95 aa4.89□□□□□ -1.63
COPS3-215ENST00000578317 LINC00575Q6W349 94 aa4.89□□□□□ -1.63
COPS3-215ENST00000578317 FAM19A1Q7Z5A9 133 aa4.89□□□□□ -1.63
COPS3-215ENST00000578317 DHRS4-AS1Q9P1J3 65 aa4.89□□□□□ -1.63
COPS3-215ENST00000578317 A0A1W2PPM0 123 aa4.88□□□□□ -1.63
COPS3-215ENST00000578317 KRTAP10-4P60372 401 aaPredicted RBP4.88□□□□□ -1.63
COPS3-215ENST00000578317 RPL37AP61513 92 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms