RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 Q9UF83 564 aa4.71□□□□□ -1.66
KRT39-203ENST00000578078 GIG44P09565 113 aaPredicted RBP4.7□□□□□ -1.66
KRT39-203ENST00000578078 Q6ZTI0 123 aa4.7□□□□□ -1.66
KRT39-203ENST00000578078 NOP10Q9NPE3 64 aaKnown RBP4.7□□□□□ -1.66
KRT39-203ENST00000578078 RBM12B-AS1Q9P1G2 102 aa4.7□□□□□ -1.66
KRT39-203ENST00000578078 TRGV2A0A075B6R0 118 aa4.7□□□□□ -1.66
KRT39-203ENST00000578078 TRBV6-8A0A0A6YYG3 113 aa4.7□□□□□ -1.66
KRT39-203ENST00000578078 TRAV22A0A0B4J277 110 aa4.7□□□□□ -1.66
KRT39-203ENST00000578078 IGHV3OR16-9A0A0B4J2B5 98 aa4.7□□□□□ -1.66
KRT39-203ENST00000578078 NANOS2P60321 138 aaKnown RBP4.7□□□□□ -1.66
KRT39-203ENST00000578078 CSNK1G2-AS1Q8NCQ2 148 aa4.7□□□□□ -1.66
KRT39-203ENST00000578078 M0R378 163 aa4.69□□□□□ -1.66
KRT39-203ENST00000578078 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.69□□□□□ -1.66
KRT39-203ENST00000578078 Q8IZM0 81 aa4.69□□□□□ -1.66
KRT39-203ENST00000578078 ZCCHC13Q8WW36 166 aaKnown RBP4.69□□□□□ -1.66
KRT39-203ENST00000578078 NOTCH2Q04721 2471 aa4.69□□□□□ -1.66
KRT39-203ENST00000578078 COX7BP24311 80 aa4.68□□□□□ -1.66
KRT39-203ENST00000578078 SYCNQ0VAF6 134 aa4.68□□□□□ -1.66
KRT39-203ENST00000578078 C1orf64Q8NEQ6 169 aa4.68□□□□□ -1.66
KRT39-203ENST00000578078 HIVEP1P15822 2718 aa4.68□□□□□ -1.66
KRT39-203ENST00000578078 C2CD3Q4AC94 2353 aa4.67□□□□□ -1.66
KRT39-203ENST00000578078 JMJD1CQ15652 2540 aa4.67□□□□□ -1.66
KRT39-203ENST00000578078 TRGV4A0A0C4DH28 118 aa4.67□□□□□ -1.66
KRT39-203ENST00000578078 C11orf45Q8TAV5 145 aa4.67□□□□□ -1.66
KRT39-203ENST00000578078 FN1P02751 2386 aaKnown RBP4.67□□□□□ -1.66
KRT39-203ENST00000578078 PSCAO43653 123 aa4.67□□□□□ -1.66
KRT39-203ENST00000578078 IGKV4-1P06312 121 aa4.67□□□□□ -1.66
KRT39-203ENST00000578078 APOC4P55056 127 aa4.67□□□□□ -1.66
KRT39-203ENST00000578078 SPANXA2-OT1Q8N9U9 137 aa4.66□□□□□ -1.66
KRT39-203ENST00000578078 DIRC1Q969H9 104 aa4.65□□□□□ -1.66
KRT39-203ENST00000578078 Q9BRP9 147 aa4.65□□□□□ -1.66
KRT39-203ENST00000578078 CELA1Q9UNI1 258 aa4.65□□□□□ -1.66
KRT39-203ENST00000578078 TEP1Q99973 2627 aaKnown RBP4.65□□□□□ -1.67
KRT39-203ENST00000578078 A0A087X002 238 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 C6orf99Q4VX62 202 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 Q5VV11 94 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 C7orf65Q6ZTY9 151 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 LINC00269Q8N2A0 174 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 TENM1Q9UKZ4 2725 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 VWFP04275 2813 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 LOC101927531A0A1B0GV80 90 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 A6NN06 94 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 H3BPC8 53 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 ZNF73O43830 326 aaPredicted RBP4.64□□□□□ -1.67
KRT39-203ENST00000578078 DEFB130BP0DP73 79 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 DEFB130AP0DP74 79 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 LCA10Q71F78 164 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 LINC00612Q8N6U2 182 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 PRAC1Q96KF2 57 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 TOMM7Q9P0U1 55 aa4.64□□□□□ -1.67
KRT39-203ENST00000578078 NOTCH3Q9UM47 2321 aa4.63□□□□□ -1.67
KRT39-203ENST00000578078 DEFB135Q30KP9 77 aa4.63□□□□□ -1.67
KRT39-203ENST00000578078 ASB16-AS1Q495Z4 193 aa4.63□□□□□ -1.67
KRT39-203ENST00000578078 HIGD2AQ9BW72 106 aa4.63□□□□□ -1.67
KRT39-203ENST00000578078 IGLV6-57P01721 117 aa4.62□□□□□ -1.67
KRT39-203ENST00000578078 ATRQ13535 2644 aa4.61□□□□□ -1.67
KRT39-203ENST00000578078 ETDCA0A1B0GVM5 59 aa4.61□□□□□ -1.67
KRT39-203ENST00000578078 CDC42SE1Q9NRR8 79 aa4.61□□□□□ -1.67
KRT39-203ENST00000578078 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
KRT39-203ENST00000578078 C16orf90A8MZG2 172 aa4.61□□□□□ -1.67
KRT39-203ENST00000578078 M0R2N4 97 aa4.61□□□□□ -1.67
KRT39-203ENST00000578078 PSPHP1O15172 72 aa4.61□□□□□ -1.67
KRT39-203ENST00000578078 HIGD2BQ4VC39 106 aa4.61□□□□□ -1.67
KRT39-203ENST00000578078 Q6ZQY7 126 aa4.61□□□□□ -1.67
KRT39-203ENST00000578078 KRTAP4-6Q9BYQ5 205 aa4.61□□□□□ -1.67
KRT39-203ENST00000578078 PRO0255Q9UI72 69 aa4.61□□□□□ -1.67
KRT39-203ENST00000578078 A0A1B0GUV1 79 aa4.6□□□□□ -1.67
KRT39-203ENST00000578078 A8MUN3 132 aa4.6□□□□□ -1.67
KRT39-203ENST00000578078 F8P00451 2351 aa4.6□□□□□ -1.67
KRT39-203ENST00000578078 KRTAP24-1Q3LI83 254 aa4.59□□□□□ -1.67
KRT39-203ENST00000578078 LINC00959A0A1B0GUT2 108 aa4.58□□□□□ -1.68
KRT39-203ENST00000578078 HCG22E2RYF7 251 aa4.58□□□□□ -1.68
KRT39-203ENST00000578078 CHKB-CPT1BH3BT56 60 aa4.58□□□□□ -1.68
KRT39-203ENST00000578078 DEFB4AO15263 64 aa4.58□□□□□ -1.68
KRT39-203ENST00000578078 SPART-AS1P0CW21 52 aa4.58□□□□□ -1.68
KRT39-203ENST00000578078 Q8N9P0 234 aaPredicted RBP4.58□□□□□ -1.68
KRT39-203ENST00000578078 Q8NAQ8 132 aa4.58□□□□□ -1.68
KRT39-203ENST00000578078 CHCHD10Q8WYQ3 142 aaPredicted RBP4.58□□□□□ -1.68
KRT39-203ENST00000578078 B9D2Q9BPU9 175 aa4.58□□□□□ -1.68
KRT39-203ENST00000578078 KCNQ1DNQ9H478 68 aa4.58□□□□□ -1.68
KRT39-203ENST00000578078 C8orf87E5RJ46 101 aa4.57□□□□□ -1.68
KRT39-203ENST00000578078 IGLV4-60A0A075B6I1 120 aa4.57□□□□□ -1.68
KRT39-203ENST00000578078 NKAPP1Q8N9T2 125 aa4.57□□□□□ -1.68
KRT39-203ENST00000578078 NBEAL2Q6ZNJ1 2754 aa4.56□□□□□ -1.68
KRT39-203ENST00000578078 GVQW2A0A096LPI5 108 aaPredicted RBP4.56□□□□□ -1.68
KRT39-203ENST00000578078 IGKV3OR2-268A0A0C4DH90 116 aa4.56□□□□□ -1.68
KRT39-203ENST00000578078 A0A0J9YWU9 116 aa4.56□□□□□ -1.68
KRT39-203ENST00000578078 KRTAP21-3Q3LHN1 58 aa4.56□□□□□ -1.68
KRT39-203ENST00000578078 LINC00208Q96KT6 92 aa4.56□□□□□ -1.68
KRT39-203ENST00000578078 IGLV5-48A0A075B6I7 105 aa4.55□□□□□ -1.68
KRT39-203ENST00000578078 A0A096LPF7 62 aa4.55□□□□□ -1.68
KRT39-203ENST00000578078 MP68P56378 58 aa4.55□□□□□ -1.68
KRT39-203ENST00000578078 EGFEM1PQ0D2K5 195 aa4.55□□□□□ -1.68
KRT39-203ENST00000578078 KIAA0087Q14695 138 aa4.55□□□□□ -1.68
KRT39-203ENST00000578078 SCXQ7RTU7 201 aa4.55□□□□□ -1.68
KRT39-203ENST00000578078 SMIM29Q86T20 159 aa4.55□□□□□ -1.68
KRT39-203ENST00000578078 CMYA5Q8N3K9 4069 aa4.55□□□□□ -1.68
KRT39-203ENST00000578078 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.54□□□□□ -1.68
KRT39-203ENST00000578078 HTN3P15516 51 aa4.54□□□□□ -1.68
KRT39-203ENST00000578078 KRTAP10-11P60412 298 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms