RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 TRAV23DV6A0A075B6W5 121 aa15.4■□□□□ 0.06
PPP4R1-204ENST00000577393 S100A2P29034 98 aa15.4■□□□□ 0.06
PPP4R1-204ENST00000577393 AKR1D1P51857 326 aa15.4■□□□□ 0.06
PPP4R1-204ENST00000577393 C3orf22Q8N5N4 141 aa15.4■□□□□ 0.06
PPP4R1-204ENST00000577393 HIST1H2BLQ99880 126 aa15.4■□□□□ 0.06
PPP4R1-204ENST00000577393 SCGB1D4Q6XE38 83 aa15.38■□□□□ 0.05
PPP4R1-204ENST00000577393 LINC00304Q8N9R0 145 aa15.38■□□□□ 0.05
PPP4R1-204ENST00000577393 PRR4Q16378 134 aa15.37■□□□□ 0.05
PPP4R1-204ENST00000577393 Q6ZRX8 168 aa15.37■□□□□ 0.05
PPP4R1-204ENST00000577393 ERC2-IT1O76042 136 aa15.36■□□□□ 0.05
PPP4R1-204ENST00000577393 Q9BRP9 147 aa15.36■□□□□ 0.05
PPP4R1-204ENST00000577393 ZNF73O43830 326 aaPredicted RBP15.35■□□□□ 0.05
PPP4R1-204ENST00000577393 S100A6P06703 90 aa15.35■□□□□ 0.05
PPP4R1-204ENST00000577393 PPDPFQ9H3Y8 114 aa15.35■□□□□ 0.05
PPP4R1-204ENST00000577393 PCP2Q8IVA1 136 aa15.34■□□□□ 0.05
PPP4R1-204ENST00000577393 OR13C6PQ8NH95 151 aa15.34■□□□□ 0.05
PPP4R1-204ENST00000577393 SPANXDQ9BXN6 97 aa15.34■□□□□ 0.05
PPP4R1-204ENST00000577393 SNRPEP62304 92 aaKnown RBP15.32■□□□□ 0.04
PPP4R1-204ENST00000577393 CBY1Q9Y3M2 126 aa15.32■□□□□ 0.04
PPP4R1-204ENST00000577393 JOSD1Q15040 202 aaPredicted RBP15.3■□□□□ 0.04
PPP4R1-204ENST00000577393 LINC00483Q53H64 154 aa15.3■□□□□ 0.04
PPP4R1-204ENST00000577393 GAGE2AQ6NT46 116 aa15.3■□□□□ 0.04
PPP4R1-204ENST00000577393 LINC00518Q8N0U6 118 aa15.29■□□□□ 0.04
PPP4R1-204ENST00000577393 IFITM1P13164 125 aa15.26■□□□□ 0.03
PPP4R1-204ENST00000577393 HINT1P49773 126 aaPredicted RBP15.26■□□□□ 0.03
PPP4R1-204ENST00000577393 Q6ZVH6 145 aa15.25■□□□□ 0.03
PPP4R1-204ENST00000577393 COPS9Q8WXC6 57 aa15.25■□□□□ 0.03
PPP4R1-204ENST00000577393 CTAG1AP78358 180 aa15.23■□□□□ 0.03
PPP4R1-204ENST00000577393 HSBP1L1C9JCN9 74 aa15.22■□□□□ 0.03
PPP4R1-204ENST00000577393 MUSTN1Q8IVN3 82 aa15.22■□□□□ 0.03
PPP4R1-204ENST00000577393 RNF213Q63HN8 5207 aa15.21■□□□□ 0.03
PPP4R1-204ENST00000577393 SPAG11AQ6PDA7 123 aa15.21■□□□□ 0.03
PPP4R1-204ENST00000577393 Q8NBF4 154 aa15.21■□□□□ 0.03
PPP4R1-204ENST00000577393 RETNLBQ9BQ08 111 aa15.21■□□□□ 0.03
PPP4R1-204ENST00000577393 C5orf52A6NGY3 159 aa15.19■□□□□ 0.02
PPP4R1-204ENST00000577393 C4orf48Q5BLP8 95 aa15.18■□□□□ 0.02
PPP4R1-204ENST00000577393 ST20-AS1Q8NBB2 130 aa15.18■□□□□ 0.02
PPP4R1-204ENST00000577393 IGLV9-49A0A0B4J1Y8 123 aa15.17■□□□□ 0.02
PPP4R1-204ENST00000577393 C6orf99Q4VX62 202 aa15.17■□□□□ 0.02
PPP4R1-204ENST00000577393 SCGB1D1O95968 90 aa15.16■□□□□ 0.02
PPP4R1-204ENST00000577393 MOBPQ13875 183 aa15.16■□□□□ 0.02
PPP4R1-204ENST00000577393 COX7BP24311 80 aa15.14■□□□□ 0.01
PPP4R1-204ENST00000577393 ELOF1P60002 83 aaKnown RBP15.14■□□□□ 0.01
PPP4R1-204ENST00000577393 DHRS4-AS1Q9P1J3 65 aa15.14■□□□□ 0.01
PPP4R1-204ENST00000577393 A6NDN8 102 aa15.13■□□□□ 0.01
PPP4R1-204ENST00000577393 SSBP3-AS1Q7Z2R9 100 aa15.12■□□□□ 0.01
PPP4R1-204ENST00000577393 TRAV13-2A0A0B4J235 113 aa15.07■□□□□ 0
PPP4R1-204ENST00000577393 TRBV7-6A0A0J9YX20 115 aa15.07■□□□□ 0
PPP4R1-204ENST00000577393 SPINK1P00995 79 aa15.07■□□□□ 0
PPP4R1-204ENST00000577393 IGLV7-46A0A075B6I9 117 aa15.05■□□□□ -0
PPP4R1-204ENST00000577393 SPRR1BP22528 89 aa15.05■□□□□ -0
PPP4R1-204ENST00000577393 C9orf153Q5TBE3 101 aa15.05■□□□□ -0
PPP4R1-204ENST00000577393 A0A1B0GWB2 263 aa15.03■□□□□ -0
PPP4R1-204ENST00000577393 COX8AP10176 69 aa15.01□□□□□ -0.01
PPP4R1-204ENST00000577393 SMIM11BQ8TCY0 68 aa15.01□□□□□ -0.01
PPP4R1-204ENST00000577393 A4D1N5 150 aa15□□□□□ -0.01
PPP4R1-204ENST00000577393 SLC25A34Q6PIV7 304 aa14.99□□□□□ -0.01
PPP4R1-204ENST00000577393 TAL2Q16559 108 aa14.98□□□□□ -0.01
PPP4R1-204ENST00000577393 TPRXLQ17RH7 258 aa14.98□□□□□ -0.01
PPP4R1-204ENST00000577393 DEFB105AQ8NG35 78 aa14.97□□□□□ -0.01
PPP4R1-204ENST00000577393 RPS29P62273 56 aaKnown RBP14.96□□□□□ -0.01
PPP4R1-204ENST00000577393 FP248Q71RG6 208 aaPredicted RBP14.96□□□□□ -0.01
PPP4R1-204ENST00000577393 LAMTOR3Q9UHA4 124 aa14.96□□□□□ -0.01
PPP4R1-204ENST00000577393 DLEU1O43261 78 aa14.94□□□□□ -0.02
PPP4R1-204ENST00000577393 HIST1H4GQ99525 98 aa14.94□□□□□ -0.02
PPP4R1-204ENST00000577393 TEX49A0A1B0GTD5 131 aa14.93□□□□□ -0.02
PPP4R1-204ENST00000577393 Q8N377 158 aa14.92□□□□□ -0.02
PPP4R1-204ENST00000577393 C14orf144Q96I85 54 aa14.92□□□□□ -0.02
PPP4R1-204ENST00000577393 CDIP1Q9H305 208 aa14.92□□□□□ -0.02
PPP4R1-204ENST00000577393 PAM16Q9Y3D7 125 aa14.92□□□□□ -0.02
PPP4R1-204ENST00000577393 Q1RN00 199 aa14.9□□□□□ -0.02
PPP4R1-204ENST00000577393 SPATA45Q537H7 98 aa14.9□□□□□ -0.02
PPP4R1-204ENST00000577393 LINC01547P58512 204 aaPredicted RBP14.89□□□□□ -0.03
PPP4R1-204ENST00000577393 C12orf57Q99622 126 aa14.89□□□□□ -0.03
PPP4R1-204ENST00000577393 NHP2Q9NX24 153 aaKnown RBP14.89□□□□□ -0.03
PPP4R1-204ENST00000577393 IGLV5-48A0A075B6I7 105 aa14.88□□□□□ -0.03
PPP4R1-204ENST00000577393 VAMP3Q15836 100 aa14.88□□□□□ -0.03
PPP4R1-204ENST00000577393 VAMP8Q9BV40 100 aa14.88□□□□□ -0.03
PPP4R1-204ENST00000577393 SLC25A20O43772 301 aa14.87□□□□□ -0.03
PPP4R1-204ENST00000577393 SMIM29Q86T20 159 aa14.86□□□□□ -0.03
PPP4R1-204ENST00000577393 HRCT1Q6UXD1 115 aa14.83□□□□□ -0.04
PPP4R1-204ENST00000577393 LINC00575Q6W349 94 aa14.83□□□□□ -0.04
PPP4R1-204ENST00000577393 HIGD1BQ9P298 99 aa14.83□□□□□ -0.04
PPP4R1-204ENST00000577393 KRTAP13-3Q3SY46 172 aa14.81□□□□□ -0.04
PPP4R1-204ENST00000577393 PRO1933Q9H354 126 aa14.8□□□□□ -0.04
PPP4R1-204ENST00000577393 MUC2Q02817 5179 aa14.79□□□□□ -0.04
PPP4R1-204ENST00000577393 MUC17Q685J3 4493 aa14.79□□□□□ -0.04
PPP4R1-204ENST00000577393 C2orf91Q6ZV80 131 aa14.79□□□□□ -0.04
PPP4R1-204ENST00000577393 hADV29S1A0JD25 119 aa14.76□□□□□ -0.05
PPP4R1-204ENST00000577393 CFC1BP0CG36 223 aa14.76□□□□□ -0.05
PPP4R1-204ENST00000577393 CFC1P0CG37 223 aa14.76□□□□□ -0.05
PPP4R1-204ENST00000577393 LIMD2Q9BT23 127 aa14.75□□□□□ -0.05
PPP4R1-204ENST00000577393 CD164Q04900 197 aa14.74□□□□□ -0.05
PPP4R1-204ENST00000577393 PYY3Q5JQD4 70 aa14.73□□□□□ -0.05
PPP4R1-204ENST00000577393 BVES-AS1Q5T3Y7 98 aa14.73□□□□□ -0.05
PPP4R1-204ENST00000577393 Q6ZQY7 126 aa14.73□□□□□ -0.05
PPP4R1-204ENST00000577393 H7C2G1 150 aa14.72□□□□□ -0.05
PPP4R1-204ENST00000577393 RAB37Q96AX2 223 aa14.72□□□□□ -0.05
PPP4R1-204ENST00000577393 TMA7Q9Y2S6 64 aaKnown RBP14.72□□□□□ -0.05
PPP4R1-204ENST00000577393 A0A0G2JQZ4 141 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms