RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 Q6ZQT0 140 aa6.19□□□□□ -1.42
CDH8-203ENST00000577390 PHF5AQ7RTV0 110 aaKnown RBP6.19□□□□□ -1.42
CDH8-203ENST00000577390 FP248Q71RG6 208 aaPredicted RBP6.19□□□□□ -1.42
CDH8-203ENST00000577390 LINC00304Q8N9R0 145 aa6.19□□□□□ -1.42
CDH8-203ENST00000577390 Q8NBF4 154 aa6.19□□□□□ -1.42
CDH8-203ENST00000577390 CYSTM1Q9H1C7 97 aa6.18□□□□□ -1.42
CDH8-203ENST00000577390 OXTP01178 125 aa6.18□□□□□ -1.42
CDH8-203ENST00000577390 TLX1NBP0CAT3 122 aa6.18□□□□□ -1.42
CDH8-203ENST00000577390 IGFL2Q6UWQ7 119 aa6.18□□□□□ -1.42
CDH8-203ENST00000577390 BAHCC1Q9P281 2608 aa6.17□□□□□ -1.42
CDH8-203ENST00000577390 TEX15Q9BXT5 2789 aa6.17□□□□□ -1.42
CDH8-203ENST00000577390 LCA10Q71F78 164 aa6.17□□□□□ -1.42
CDH8-203ENST00000577390 CDC42SE1Q9NRR8 79 aa6.17□□□□□ -1.42
CDH8-203ENST00000577390 IGLV5-45A0A087WSX0 123 aa6.17□□□□□ -1.42
CDH8-203ENST00000577390 LINC00167Q96N53 147 aa6.17□□□□□ -1.42
CDH8-203ENST00000577390 Q6ZSN1 163 aa6.17□□□□□ -1.42
CDH8-203ENST00000577390 FBXL19-AS1Q494R0 122 aa6.16□□□□□ -1.42
CDH8-203ENST00000577390 PCNTO95613 3336 aa6.16□□□□□ -1.42
CDH8-203ENST00000577390 MGAQ8IWI9 3026 aa6.16□□□□□ -1.42
CDH8-203ENST00000577390 COL6A5A8TX70 2615 aa6.15□□□□□ -1.42
CDH8-203ENST00000577390 UQCR11O14957 56 aa6.15□□□□□ -1.42
CDH8-203ENST00000577390 NBEAL1Q6ZS30 2694 aa6.15□□□□□ -1.42
CDH8-203ENST00000577390 K7EQZ3 153 aa6.15□□□□□ -1.42
CDH8-203ENST00000577390 KIF25-AS1Q9Y6Z4 181 aa6.15□□□□□ -1.42
CDH8-203ENST00000577390 IGHV3OR16-9A0A0B4J2B5 98 aa6.14□□□□□ -1.43
CDH8-203ENST00000577390 Q6ZSA8 131 aa6.14□□□□□ -1.43
CDH8-203ENST00000577390 LRBAP50851 2863 aa6.14□□□□□ -1.43
CDH8-203ENST00000577390 STAB1Q9NY15 2570 aa6.14□□□□□ -1.43
CDH8-203ENST00000577390 LINC00315P59091 139 aa6.13□□□□□ -1.43
CDH8-203ENST00000577390 TRBV7-4A0A0J9YYF1 115 aa6.13□□□□□ -1.43
CDH8-203ENST00000577390 DMBT1Q9UGM3 2413 aaPredicted RBP6.12□□□□□ -1.43
CDH8-203ENST00000577390 MIR22HGQ0VDD5 57 aa6.12□□□□□ -1.43
CDH8-203ENST00000577390 EIF4EBP3O60516 100 aaPredicted RBP6.11□□□□□ -1.43
CDH8-203ENST00000577390 SETXQ7Z333 2677 aaKnown RBP6.11□□□□□ -1.43
CDH8-203ENST00000577390 NBDYA0A0U1RRE5 68 aa6.1□□□□□ -1.43
CDH8-203ENST00000577390 A8MUN3 132 aa6.1□□□□□ -1.43
CDH8-203ENST00000577390 IGLV1-51P01701 117 aa6.1□□□□□ -1.43
CDH8-203ENST00000577390 LINC00588Q9Y4M8 146 aa6.1□□□□□ -1.43
CDH8-203ENST00000577390 DSCR10P59022 87 aa6.09□□□□□ -1.43
CDH8-203ENST00000577390 PRO3102Q9H379 93 aa6.09□□□□□ -1.43
CDH8-203ENST00000577390 HECTD1Q9ULT8 2610 aa6.09□□□□□ -1.43
CDH8-203ENST00000577390 A0A1B0GW54 56 aa6.08□□□□□ -1.44
CDH8-203ENST00000577390 ST20-AS1Q8NBB2 130 aa6.08□□□□□ -1.44
CDH8-203ENST00000577390 CFAP46Q8IYW2 2715 aa6.08□□□□□ -1.44
CDH8-203ENST00000577390 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
CDH8-203ENST00000577390 TACC2O95359 2948 aa6.07□□□□□ -1.44
CDH8-203ENST00000577390 UTP20O75691 2785 aaKnown RBP6.07□□□□□ -1.44
CDH8-203ENST00000577390 LOC101927531A0A1B0GV80 90 aa6.07□□□□□ -1.44
CDH8-203ENST00000577390 FLNAP21333 2647 aaKnown RBP6.07□□□□□ -1.44
CDH8-203ENST00000577390 UBR5O95071 2799 aaPredicted RBP6.07□□□□□ -1.44
CDH8-203ENST00000577390 C16orf95Q9H693 158 aa6.06□□□□□ -1.44
CDH8-203ENST00000577390 Q5VSD8 79 aa6.06□□□□□ -1.44
CDH8-203ENST00000577390 ELOF1P60002 83 aaKnown RBP6.06□□□□□ -1.44
CDH8-203ENST00000577390 C11orf72Q8NBR9 251 aa6.06□□□□□ -1.44
CDH8-203ENST00000577390 IGLV1-50A0A075B6I6 118 aa6.06□□□□□ -1.44
CDH8-203ENST00000577390 ODF3L2Q3SX64 289 aa6.06□□□□□ -1.44
CDH8-203ENST00000577390 CFAP54Q96N23 3096 aa6.05□□□□□ -1.44
CDH8-203ENST00000577390 KRTAP10-9P60411 292 aa6.05□□□□□ -1.44
CDH8-203ENST00000577390 A0A1B0GUV1 79 aa6.05□□□□□ -1.44
CDH8-203ENST00000577390 HRES1P13985 223 aa6.05□□□□□ -1.44
CDH8-203ENST00000577390 H3BPC8 53 aa6.04□□□□□ -1.44
CDH8-203ENST00000577390 AVPP01185 164 aa6.03□□□□□ -1.44
CDH8-203ENST00000577390 FAM229BQ4G0N7 80 aa6.03□□□□□ -1.44
CDH8-203ENST00000577390 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
CDH8-203ENST00000577390 IGLV1-40P01703 118 aa6.01□□□□□ -1.45
CDH8-203ENST00000577390 MRPL34Q9BQ48 92 aaKnown RBP6.01□□□□□ -1.45
CDH8-203ENST00000577390 Q75L30 129 aa6□□□□□ -1.45
CDH8-203ENST00000577390 H1FX-AS1Q4G0G2 97 aa6□□□□□ -1.45
CDH8-203ENST00000577390 COA5Q86WW8 74 aa6□□□□□ -1.45
CDH8-203ENST00000577390 Q8N1X5 172 aa6□□□□□ -1.45
CDH8-203ENST00000577390 NBEAL2Q6ZNJ1 2754 aa5.99□□□□□ -1.45
CDH8-203ENST00000577390 SPANXA2-OT1Q8N9U9 137 aa5.98□□□□□ -1.45
CDH8-203ENST00000577390 LAMA2P24043 3122 aaKnown RBP5.97□□□□□ -1.45
CDH8-203ENST00000577390 Q6ZRX8 168 aa5.97□□□□□ -1.45
CDH8-203ENST00000577390 A8MWP4 228 aa5.97□□□□□ -1.45
CDH8-203ENST00000577390 MAST4O15021 2626 aa5.97□□□□□ -1.45
CDH8-203ENST00000577390 OCR1Q9BZK8 76 aa5.97□□□□□ -1.45
CDH8-203ENST00000577390 CEP350Q5VT06 3117 aa5.96□□□□□ -1.46
CDH8-203ENST00000577390 MGAM2Q2M2H8 2515 aa5.96□□□□□ -1.46
CDH8-203ENST00000577390 A0A1W2PNU3 283 aaPredicted RBP5.95□□□□□ -1.46
CDH8-203ENST00000577390 FAM168BA1KXE4 195 aa5.95□□□□□ -1.46
CDH8-203ENST00000577390 LINC00528Q8N1L1 170 aa5.94□□□□□ -1.46
CDH8-203ENST00000577390 IGLV7-46A0A075B6I9 117 aa5.93□□□□□ -1.46
CDH8-203ENST00000577390 Q5VV11 94 aa5.93□□□□□ -1.46
CDH8-203ENST00000577390 PRR26Q8N8Z3 221 aa5.92□□□□□ -1.46
CDH8-203ENST00000577390 C9orf163Q8N9P6 203 aa5.92□□□□□ -1.46
CDH8-203ENST00000577390 DNAH10OSP0CZ25 163 aa5.91□□□□□ -1.46
CDH8-203ENST00000577390 ANAPC11Q9NYG5 84 aa5.91□□□□□ -1.46
CDH8-203ENST00000577390 FAM104AQ969W3 186 aa5.9□□□□□ -1.46
CDH8-203ENST00000577390 XIRP2A4UGR9 3374 aa5.9□□□□□ -1.47
CDH8-203ENST00000577390 KRTAP24-1Q3LI83 254 aa5.9□□□□□ -1.47
CDH8-203ENST00000577390 ITPR3Q14573 2671 aa5.89□□□□□ -1.47
CDH8-203ENST00000577390 R4GN34 69 aa5.89□□□□□ -1.47
CDH8-203ENST00000577390 ZNF861PO60384 105 aa5.89□□□□□ -1.47
CDH8-203ENST00000577390 STAB2Q8WWQ8 2551 aa5.89□□□□□ -1.47
CDH8-203ENST00000577390 SPINK7P58062 85 aa5.88□□□□□ -1.47
CDH8-203ENST00000577390 TEP1Q99973 2627 aaKnown RBP5.87□□□□□ -1.47
CDH8-203ENST00000577390 KALRNO60229 2985 aa5.87□□□□□ -1.47
CDH8-203ENST00000577390 ZFHX3Q15911 3703 aa5.86□□□□□ -1.47
CDH8-203ENST00000577390 A0A1B0GVX0 72 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms