RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 OXTP01178 125 aa5.73□□□□□ -1.49
NPLOC4-219ENST00000576713 IGKV2D-28P01615 120 aa5.73□□□□□ -1.49
NPLOC4-219ENST00000576713 NMUP48645 174 aa5.73□□□□□ -1.49
NPLOC4-219ENST00000576713 TMEM238C9JI98 176 aa5.72□□□□□ -1.49
NPLOC4-219ENST00000576713 S100A2P29034 98 aa5.72□□□□□ -1.49
NPLOC4-219ENST00000576713 NPC2P61916 151 aa5.72□□□□□ -1.49
NPLOC4-219ENST00000576713 PCP2Q8IVA1 136 aa5.72□□□□□ -1.49
NPLOC4-219ENST00000576713 BOD1L2Q8IYS8 172 aa5.72□□□□□ -1.49
NPLOC4-219ENST00000576713 NKAPP1Q8N9T2 125 aa5.72□□□□□ -1.49
NPLOC4-219ENST00000576713 IGLV1-50A0A075B6I6 118 aa5.71□□□□□ -1.5
NPLOC4-219ENST00000576713 NCR3O14931 201 aa5.71□□□□□ -1.5
NPLOC4-219ENST00000576713 LBHQ53QV2 105 aaPredicted RBP5.71□□□□□ -1.5
NPLOC4-219ENST00000576713 SPINK6Q6UWN8 80 aa5.71□□□□□ -1.5
NPLOC4-219ENST00000576713 LOC107984156A0A0G2JMH3 177 aa5.7□□□□□ -1.5
NPLOC4-219ENST00000576713 C20orf202A1L168 122 aa5.7□□□□□ -1.5
NPLOC4-219ENST00000576713 ZNF815PA8K554 130 aa5.7□□□□□ -1.5
NPLOC4-219ENST00000576713 LINC00587B1AMM8 73 aa5.7□□□□□ -1.5
NPLOC4-219ENST00000576713 KRTAP13-1Q8IUC0 172 aa5.7□□□□□ -1.5
NPLOC4-219ENST00000576713 ARL17AQ8IVW1 177 aa5.7□□□□□ -1.5
NPLOC4-219ENST00000576713 M0R378 163 aa5.69□□□□□ -1.5
NPLOC4-219ENST00000576713 BCE1O60756 84 aa5.69□□□□□ -1.5
NPLOC4-219ENST00000576713 KRTAP1-4P0C5Y4 121 aa5.69□□□□□ -1.5
NPLOC4-219ENST00000576713 RPL24P83731 157 aaKnown RBP5.69□□□□□ -1.5
NPLOC4-219ENST00000576713 TMEM126AQ9H061 195 aa5.69□□□□□ -1.5
NPLOC4-219ENST00000576713 H0Y9J4 135 aa5.68□□□□□ -1.5
NPLOC4-219ENST00000576713 LINC01600Q96MT4 127 aa5.68□□□□□ -1.5
NPLOC4-219ENST00000576713 ZNF861PO60384 105 aa5.67□□□□□ -1.5
NPLOC4-219ENST00000576713 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
NPLOC4-219ENST00000576713 PRLHP81277 87 aa5.67□□□□□ -1.5
NPLOC4-219ENST00000576713 TRBV10-3A0A0K0K1G6 114 aa5.66□□□□□ -1.5
NPLOC4-219ENST00000576713 TIMM17BO60830 172 aa5.66□□□□□ -1.5
NPLOC4-219ENST00000576713 LINC00308Q8TCZ7 52 aa5.66□□□□□ -1.5
NPLOC4-219ENST00000576713 KRTAP4-16G5E9R7 235 aaPredicted RBP5.65□□□□□ -1.5
NPLOC4-219ENST00000576713 REG3GQ6UW15 175 aa5.65□□□□□ -1.5
NPLOC4-219ENST00000576713 DIRC1Q969H9 104 aa5.65□□□□□ -1.5
NPLOC4-219ENST00000576713 SPRR1AP35321 89 aa5.64□□□□□ -1.51
NPLOC4-219ENST00000576713 KCNQ1DNQ9H478 68 aa5.64□□□□□ -1.51
NPLOC4-219ENST00000576713 ANAPC11Q9NYG5 84 aa5.64□□□□□ -1.51
NPLOC4-219ENST00000576713 NDUFC2O95298 119 aa5.63□□□□□ -1.51
NPLOC4-219ENST00000576713 IGLV6-57P01721 117 aa5.63□□□□□ -1.51
NPLOC4-219ENST00000576713 PYY3Q5JQD4 70 aa5.63□□□□□ -1.51
NPLOC4-219ENST00000576713 SCGB1D4Q6XE38 83 aa5.63□□□□□ -1.51
NPLOC4-219ENST00000576713 FAM19A1Q7Z5A9 133 aa5.63□□□□□ -1.51
NPLOC4-219ENST00000576713 SPANXDQ9BXN6 97 aa5.63□□□□□ -1.51
NPLOC4-219ENST00000576713 SPANXB1Q9NS25 103 aaPredicted RBP5.63□□□□□ -1.51
NPLOC4-219ENST00000576713 SPANXCQ9NY87 97 aa5.63□□□□□ -1.51
NPLOC4-219ENST00000576713 TRBV10-2A0A0K0K1G8 114 aa5.62□□□□□ -1.51
NPLOC4-219ENST00000576713 DDTP30046 118 aa5.62□□□□□ -1.51
NPLOC4-219ENST00000576713 RPL28P46779 137 aaKnown RBP5.62□□□□□ -1.51
NPLOC4-219ENST00000576713 UBE2AP49459 152 aa5.62□□□□□ -1.51
NPLOC4-219ENST00000576713 SEC61BP60468 96 aaKnown RBP5.62□□□□□ -1.51
NPLOC4-219ENST00000576713 MIEN1Q9BRT3 115 aa5.62□□□□□ -1.51
NPLOC4-219ENST00000576713 A0A087X002 238 aa5.61□□□□□ -1.51
NPLOC4-219ENST00000576713 TSTD3H0UI37 97 aa5.61□□□□□ -1.51
NPLOC4-219ENST00000576713 JOSD1Q15040 202 aaPredicted RBP5.61□□□□□ -1.51
NPLOC4-219ENST00000576713 MUSTN1Q8IVN3 82 aa5.61□□□□□ -1.51
NPLOC4-219ENST00000576713 LINC00337Q8N6G1 96 aa5.61□□□□□ -1.51
NPLOC4-219ENST00000576713 LPAP08519 4548 aa5.6□□□□□ -1.51
NPLOC4-219ENST00000576713 IGKV2D-30A0A075B6S6 120 aa5.6□□□□□ -1.51
NPLOC4-219ENST00000576713 SMCR5Q8TEV8 140 aa5.6□□□□□ -1.51
NPLOC4-219ENST00000576713 LRP2P98164 4655 aa5.59□□□□□ -1.51
NPLOC4-219ENST00000576713 HSBP1L1C9JCN9 74 aa5.59□□□□□ -1.51
NPLOC4-219ENST00000576713 ERC2-IT1O76042 136 aa5.59□□□□□ -1.51
NPLOC4-219ENST00000576713 KRTAP13-2Q52LG2 175 aa5.59□□□□□ -1.51
NPLOC4-219ENST00000576713 C14orf144Q96I85 54 aa5.59□□□□□ -1.51
NPLOC4-219ENST00000576713 Q9BRP9 147 aa5.59□□□□□ -1.51
NPLOC4-219ENST00000576713 HIGD2AQ9BW72 106 aa5.59□□□□□ -1.51
NPLOC4-219ENST00000576713 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
NPLOC4-219ENST00000576713 TRAV23DV6A0A075B6W5 121 aa5.58□□□□□ -1.52
NPLOC4-219ENST00000576713 COX8AP10176 69 aa5.58□□□□□ -1.52
NPLOC4-219ENST00000576713 SPATA45Q537H7 98 aa5.58□□□□□ -1.52
NPLOC4-219ENST00000576713 S100A7L2Q5SY68 101 aa5.58□□□□□ -1.52
NPLOC4-219ENST00000576713 C2orf91Q6ZV80 131 aa5.57□□□□□ -1.52
NPLOC4-219ENST00000576713 ETDCA0A1B0GVM5 59 aa5.56□□□□□ -1.52
NPLOC4-219ENST00000576713 ZNF73O43830 326 aaPredicted RBP5.56□□□□□ -1.52
NPLOC4-219ENST00000576713 IFITM1P13164 125 aa5.56□□□□□ -1.52
NPLOC4-219ENST00000576713 LCE1AQ5T7P2 110 aa5.56□□□□□ -1.52
NPLOC4-219ENST00000576713 OR13C6PQ8NH95 151 aa5.56□□□□□ -1.52
NPLOC4-219ENST00000576713 VAMP8Q9BV40 100 aa5.56□□□□□ -1.52
NPLOC4-219ENST00000576713 PPDPFQ9H3Y8 114 aa5.56□□□□□ -1.52
NPLOC4-219ENST00000576713 DLEU1O43261 78 aa5.55□□□□□ -1.52
NPLOC4-219ENST00000576713 Q6ZRX8 168 aa5.55□□□□□ -1.52
NPLOC4-219ENST00000576713 Q6ZVH6 145 aa5.55□□□□□ -1.52
NPLOC4-219ENST00000576713 SPRR4Q96PI1 79 aa5.55□□□□□ -1.52
NPLOC4-219ENST00000576713 A4D1N5 150 aa5.54□□□□□ -1.52
NPLOC4-219ENST00000576713 C3orf22Q8N5N4 141 aa5.54□□□□□ -1.52
NPLOC4-219ENST00000576713 C6orf99Q4VX62 202 aa5.53□□□□□ -1.52
NPLOC4-219ENST00000576713 ST20-AS1Q8NBB2 130 aa5.53□□□□□ -1.52
NPLOC4-219ENST00000576713 A6NDN8 102 aa5.52□□□□□ -1.53
NPLOC4-219ENST00000576713 FAM229BQ4G0N7 80 aa5.52□□□□□ -1.53
NPLOC4-219ENST00000576713 CRYGAP11844 174 aa5.51□□□□□ -1.53
NPLOC4-219ENST00000576713 ELOF1P60002 83 aaKnown RBP5.51□□□□□ -1.53
NPLOC4-219ENST00000576713 SLC25A34Q6PIV7 304 aa5.51□□□□□ -1.53
NPLOC4-219ENST00000576713 SMIM11BQ8TCY0 68 aa5.51□□□□□ -1.53
NPLOC4-219ENST00000576713 HIST1H4GQ99525 98 aa5.51□□□□□ -1.53
NPLOC4-219ENST00000576713 A0A1B0GV90 55 aa5.5□□□□□ -1.53
NPLOC4-219ENST00000576713 RPL13AP40429 203 aaKnown RBP5.5□□□□□ -1.53
NPLOC4-219ENST00000576713 LINC00483Q53H64 154 aa5.5□□□□□ -1.53
NPLOC4-219ENST00000576713 TYMSOSQ8TAI1 123 aa5.5□□□□□ -1.53
NPLOC4-219ENST00000576713 HIGD1BQ9P298 99 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms