RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PFN2P35080 140 aa4.95□□□□□ -1.62
CCDC40-215ENST00000576033 PHF5AQ7RTV0 110 aaKnown RBP4.95□□□□□ -1.62
CCDC40-215ENST00000576033 FAM19A5Q7Z5A7 132 aaPredicted RBP4.95□□□□□ -1.62
CCDC40-215ENST00000576033 LINC00337Q8N6G1 96 aa4.95□□□□□ -1.62
CCDC40-215ENST00000576033 DPH3Q96FX2 82 aa4.95□□□□□ -1.62
CCDC40-215ENST00000576033 LINC01600Q96MT4 127 aa4.95□□□□□ -1.62
CCDC40-215ENST00000576033 XAGE1AQ9HD64 81 aa4.95□□□□□ -1.62
CCDC40-215ENST00000576033 PLAC8Q9NZF1 115 aa4.95□□□□□ -1.62
CCDC40-215ENST00000576033 TRAV13-2A0A0B4J235 113 aa4.94□□□□□ -1.62
CCDC40-215ENST00000576033 TCL1BO95988 128 aa4.94□□□□□ -1.62
CCDC40-215ENST00000576033 SERTAD4-AS1Q5TG53 156 aa4.94□□□□□ -1.62
CCDC40-215ENST00000576033 Q8NDZ9 215 aa4.94□□□□□ -1.62
CCDC40-215ENST00000576033 NDUFC2-KCTD14E9PQ53 114 aa4.93□□□□□ -1.62
CCDC40-215ENST00000576033 H3BMG7 143 aa4.93□□□□□ -1.62
CCDC40-215ENST00000576033 TLX1NBP0CAT3 122 aa4.93□□□□□ -1.62
CCDC40-215ENST00000576033 RPL28P46779 137 aaKnown RBP4.93□□□□□ -1.62
CCDC40-215ENST00000576033 RPL37AP61513 92 aaKnown RBP4.93□□□□□ -1.62
CCDC40-215ENST00000576033 RNF151Q2KHN1 245 aa4.93□□□□□ -1.62
CCDC40-215ENST00000576033 F8W1H4 67 aa4.92□□□□□ -1.62
CCDC40-215ENST00000576033 H7C2G1 150 aa4.92□□□□□ -1.62
CCDC40-215ENST00000576033 M0QXV9 152 aa4.92□□□□□ -1.62
CCDC40-215ENST00000576033 SMCPP49901 116 aaPredicted RBP4.92□□□□□ -1.62
CCDC40-215ENST00000576033 TNXBP22105 4242 aa4.92□□□□□ -1.62
CCDC40-215ENST00000576033 TRBV10-2A0A0K0K1G8 114 aa4.91□□□□□ -1.62
CCDC40-215ENST00000576033 FAM229AH3BQW9 127 aa4.91□□□□□ -1.62
CCDC40-215ENST00000576033 LST1O00453 97 aa4.91□□□□□ -1.62
CCDC40-215ENST00000576033 INAFM2P0DMQ5 153 aa4.91□□□□□ -1.62
CCDC40-215ENST00000576033 PSMB2P49721 201 aa4.91□□□□□ -1.62
CCDC40-215ENST00000576033 Q1RN00 199 aa4.91□□□□□ -1.62
CCDC40-215ENST00000576033 COX6CP09669 75 aa4.9□□□□□ -1.63
CCDC40-215ENST00000576033 PRR3P79522 188 aaKnown RBP4.9□□□□□ -1.63
CCDC40-215ENST00000576033 ATXN8Q156A1 80 aa4.9□□□□□ -1.63
CCDC40-215ENST00000576033 IGLV6-57P01721 117 aa4.89□□□□□ -1.63
CCDC40-215ENST00000576033 SCGB1C2P0DMR2 95 aa4.89□□□□□ -1.63
CCDC40-215ENST00000576033 VPREB1P12018 145 aa4.89□□□□□ -1.63
CCDC40-215ENST00000576033 SMIM11BQ8TCY0 68 aa4.89□□□□□ -1.63
CCDC40-215ENST00000576033 TRACP01848 142 aa4.88□□□□□ -1.63
CCDC40-215ENST00000576033 PLA2G1BP04054 148 aaKnown RBP4.88□□□□□ -1.63
CCDC40-215ENST00000576033 CLEC2BQ92478 149 aa4.88□□□□□ -1.63
CCDC40-215ENST00000576033 TMEM126AQ9H061 195 aa4.88□□□□□ -1.63
CCDC40-215ENST00000576033 LINC00474Q9P2X8 69 aa4.88□□□□□ -1.63
CCDC40-215ENST00000576033 PSORS1C2Q9UIG4 136 aa4.88□□□□□ -1.63
CCDC40-215ENST00000576033 PLA2G2DQ9UNK4 145 aa4.88□□□□□ -1.63
CCDC40-215ENST00000576033 OCIAD2Q56VL3 154 aa4.87□□□□□ -1.63
CCDC40-215ENST00000576033 C7orf33Q8WU49 177 aa4.87□□□□□ -1.63
CCDC40-215ENST00000576033 FAM218AQ96MZ4 157 aa4.87□□□□□ -1.63
CCDC40-215ENST00000576033 C22orf24Q9Y442 160 aa4.87□□□□□ -1.63
CCDC40-215ENST00000576033 HERC1Q15751 4861 aa4.86□□□□□ -1.63
CCDC40-215ENST00000576033 IGLV5-37A0A075B6J1 123 aa4.86□□□□□ -1.63
CCDC40-215ENST00000576033 C9JAW5 83 aa4.86□□□□□ -1.63
CCDC40-215ENST00000576033 H0YGX0 51 aa4.86□□□□□ -1.63
CCDC40-215ENST00000576033 H3BT86 120 aa4.86□□□□□ -1.63
CCDC40-215ENST00000576033 SLC25A20O43772 301 aa4.86□□□□□ -1.63
CCDC40-215ENST00000576033 MTURNQ8N3F0 131 aa4.86□□□□□ -1.63
CCDC40-215ENST00000576033 PKIGQ9Y2B9 76 aa4.86□□□□□ -1.63
CCDC40-215ENST00000576033 DMBT1Q9UGM3 2413 aaPredicted RBP4.85□□□□□ -1.63
CCDC40-215ENST00000576033 A0A1B0GX51 115 aa4.85□□□□□ -1.63
CCDC40-215ENST00000576033 RPL37AP8A6NKH3 93 aa4.85□□□□□ -1.63
CCDC40-215ENST00000576033 NCR3O14931 201 aa4.85□□□□□ -1.63
CCDC40-215ENST00000576033 ETDBQ3ZM63 59 aa4.85□□□□□ -1.63
CCDC40-215ENST00000576033 C1orf137Q5JT78 98 aa4.85□□□□□ -1.63
CCDC40-215ENST00000576033 TEN1Q86WV5 123 aa4.85□□□□□ -1.63
CCDC40-215ENST00000576033 LINC00167Q96N53 147 aa4.85□□□□□ -1.63
CCDC40-215ENST00000576033 M0R378 163 aa4.84□□□□□ -1.63
CCDC40-215ENST00000576033 UBE2BP63146 152 aa4.84□□□□□ -1.63
CCDC40-215ENST00000576033 ANKRD29Q8N6D5 301 aa4.84□□□□□ -1.63
CCDC40-215ENST00000576033 OR13C6PQ8NH95 151 aa4.84□□□□□ -1.63
CCDC40-215ENST00000576033 TRBV10-3A0A0K0K1G6 114 aa4.83□□□□□ -1.64
CCDC40-215ENST00000576033 MRPL55Q7Z7F7 128 aaKnown RBP4.83□□□□□ -1.64
CCDC40-215ENST00000576033 TRBV7-6A0A0J9YX20 115 aa4.82□□□□□ -1.64
CCDC40-215ENST00000576033 K7ERU9 68 aa4.82□□□□□ -1.64
CCDC40-215ENST00000576033 C6orf99Q4VX62 202 aa4.82□□□□□ -1.64
CCDC40-215ENST00000576033 S100A7L2Q5SY68 101 aa4.82□□□□□ -1.64
CCDC40-215ENST00000576033 PPDPFLQ8WWR9 84 aa4.82□□□□□ -1.64
CCDC40-215ENST00000576033 TRAV23DV6A0A075B6W5 121 aa4.81□□□□□ -1.64
CCDC40-215ENST00000576033 NKAPP1Q8N9T2 125 aa4.81□□□□□ -1.64
CCDC40-215ENST00000576033 KCNQ1DNQ9H478 68 aa4.81□□□□□ -1.64
CCDC40-215ENST00000576033 IGLV7-43P04211 117 aa4.8□□□□□ -1.64
CCDC40-215ENST00000576033 SPRR1AP35321 89 aa4.8□□□□□ -1.64
CCDC40-215ENST00000576033 LINC00575Q6W349 94 aa4.8□□□□□ -1.64
CCDC40-215ENST00000576033 CBY1Q9Y3M2 126 aa4.8□□□□□ -1.64
CCDC40-215ENST00000576033 KRTAP4-16G5E9R7 235 aaPredicted RBP4.79□□□□□ -1.64
CCDC40-215ENST00000576033 ZNF73O43830 326 aaPredicted RBP4.79□□□□□ -1.64
CCDC40-215ENST00000576033 BAALC-AS2P0C853 105 aa4.79□□□□□ -1.64
CCDC40-215ENST00000576033 MT1HL1P0DM35 61 aa4.79□□□□□ -1.64
CCDC40-215ENST00000576033 ELOF1P60002 83 aaKnown RBP4.79□□□□□ -1.64
CCDC40-215ENST00000576033 PRLHP81277 87 aa4.79□□□□□ -1.64
CCDC40-215ENST00000576033 DIRC1Q969H9 104 aa4.79□□□□□ -1.64
CCDC40-215ENST00000576033 IGLV1-50A0A075B6I6 118 aa4.78□□□□□ -1.64
CCDC40-215ENST00000576033 OBSCN-AS1Q96MR7 158 aa4.78□□□□□ -1.64
CCDC40-215ENST00000576033 TEX49A0A1B0GTD5 131 aa4.77□□□□□ -1.65
CCDC40-215ENST00000576033 KRTAP29-1A8MX34 341 aaPredicted RBP4.77□□□□□ -1.65
CCDC40-215ENST00000576033 J3QR89 54 aa4.77□□□□□ -1.65
CCDC40-215ENST00000576033 PRYO14603 147 aa4.77□□□□□ -1.65
CCDC40-215ENST00000576033 BCE1O60756 84 aa4.77□□□□□ -1.65
CCDC40-215ENST00000576033 KRTAP13-1Q8IUC0 172 aa4.77□□□□□ -1.65
CCDC40-215ENST00000576033 J3QL48 77 aa4.76□□□□□ -1.65
CCDC40-215ENST00000576033 DNAL4O96015 105 aa4.76□□□□□ -1.65
CCDC40-215ENST00000576033 COX7BP24311 80 aa4.76□□□□□ -1.65
CCDC40-215ENST00000576033 SPINK6Q6UWN8 80 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms