RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 UBL5Q9BZL1 73 aa4.42□□□□□ -1.7
SMG6-217ENST00000575338 HUWE1Q7Z6Z7 4374 aaKnown RBP4.41□□□□□ -1.7
SMG6-217ENST00000575338 IGLV1-50A0A075B6I6 118 aa4.41□□□□□ -1.7
SMG6-217ENST00000575338 A0A1B0GW54 56 aa4.4□□□□□ -1.71
SMG6-217ENST00000575338 SPRR1AP35321 89 aa4.4□□□□□ -1.71
SMG6-217ENST00000575338 NDUFV3P56181 108 aaKnown RBP4.4□□□□□ -1.71
SMG6-217ENST00000575338 SERTAD4-AS1Q5TG53 156 aa4.4□□□□□ -1.71
SMG6-217ENST00000575338 Q6JHZ5 121 aa4.4□□□□□ -1.71
SMG6-217ENST00000575338 Q6ZRX8 168 aa4.4□□□□□ -1.71
SMG6-217ENST00000575338 CASC10Q5T4H9 136 aa4.39□□□□□ -1.71
SMG6-217ENST00000575338 REG3GQ6UW15 175 aa4.39□□□□□ -1.71
SMG6-217ENST00000575338 Q6ZQT0 140 aa4.39□□□□□ -1.71
SMG6-217ENST00000575338 FAM19A5Q7Z5A7 132 aaPredicted RBP4.39□□□□□ -1.71
SMG6-217ENST00000575338 ANAPC13Q9BS18 74 aa4.39□□□□□ -1.71
SMG6-217ENST00000575338 MGAM2Q2M2H8 2515 aa4.38□□□□□ -1.71
SMG6-217ENST00000575338 B5MCH6 92 aa4.38□□□□□ -1.71
SMG6-217ENST00000575338 C9orf163Q8N9P6 203 aa4.38□□□□□ -1.71
SMG6-217ENST00000575338 KRTAP1-5Q9BYS1 174 aa4.38□□□□□ -1.71
SMG6-217ENST00000575338 TRBV7-4A0A0J9YYF1 115 aa4.37□□□□□ -1.71
SMG6-217ENST00000575338 LINC00846Q9NV44 126 aa4.37□□□□□ -1.71
SMG6-217ENST00000575338 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.36□□□□□ -1.71
SMG6-217ENST00000575338 A0A096LNI7 61 aa4.36□□□□□ -1.71
SMG6-217ENST00000575338 RPL37AP8A6NKH3 93 aa4.36□□□□□ -1.71
SMG6-217ENST00000575338 KRTAP4-16G5E9R7 235 aaPredicted RBP4.36□□□□□ -1.71
SMG6-217ENST00000575338 UBE2BP63146 152 aa4.36□□□□□ -1.71
SMG6-217ENST00000575338 SMCR5Q8TEV8 140 aa4.36□□□□□ -1.71
SMG6-217ENST00000575338 IGLV5-48A0A075B6I7 105 aa4.35□□□□□ -1.71
SMG6-217ENST00000575338 IGKV2-24A0A0C4DH68 120 aa4.35□□□□□ -1.71
SMG6-217ENST00000575338 FAM168BA1KXE4 195 aa4.35□□□□□ -1.71
SMG6-217ENST00000575338 LRCOL1A6NCL2 159 aa4.35□□□□□ -1.71
SMG6-217ENST00000575338 F8WEM9 126 aa4.35□□□□□ -1.71
SMG6-217ENST00000575338 H0Y9J4 135 aa4.35□□□□□ -1.71
SMG6-217ENST00000575338 ATOX1O00244 68 aa4.35□□□□□ -1.71
SMG6-217ENST00000575338 FUSP35637 526 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMG6-217ENST00000575338 DNAH9Q9NYC9 4486 aa4.34□□□□□ -1.71
SMG6-217ENST00000575338 CXCL6P80162 114 aa4.34□□□□□ -1.71
SMG6-217ENST00000575338 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.71
SMG6-217ENST00000575338 FAM236AA0A1B0GUQ0 79 aa4.33□□□□□ -1.72
SMG6-217ENST00000575338 FAM236BA0A1B0GV22 79 aa4.33□□□□□ -1.72
SMG6-217ENST00000575338 FAM19A1Q7Z5A9 133 aa4.33□□□□□ -1.72
SMG6-217ENST00000575338 DEFB105AQ8NG35 78 aa4.33□□□□□ -1.72
SMG6-217ENST00000575338 TGP01266 2768 aa4.32□□□□□ -1.72
SMG6-217ENST00000575338 DYNC2H1Q8NCM8 4307 aaKnown RBP4.32□□□□□ -1.72
SMG6-217ENST00000575338 A0A087WTM6 91 aa4.32□□□□□ -1.72
SMG6-217ENST00000575338 C1orf134Q5TEV5 83 aa4.32□□□□□ -1.72
SMG6-217ENST00000575338 Q8N377 158 aa4.32□□□□□ -1.72
SMG6-217ENST00000575338 DPH3Q96FX2 82 aa4.32□□□□□ -1.72
SMG6-217ENST00000575338 WWC2-AS2Q96NR7 200 aa4.32□□□□□ -1.72
SMG6-217ENST00000575338 Q9BRP9 147 aa4.32□□□□□ -1.72
SMG6-217ENST00000575338 COL7A1Q02388 2944 aa4.32□□□□□ -1.72
SMG6-217ENST00000575338 IGKV3D-7A0A0C4DH55 119 aa4.31□□□□□ -1.72
SMG6-217ENST00000575338 A0A1W2PNN7 141 aa4.31□□□□□ -1.72
SMG6-217ENST00000575338 BCE1O60756 84 aa4.31□□□□□ -1.72
SMG6-217ENST00000575338 UBE2AP49459 152 aa4.31□□□□□ -1.72
SMG6-217ENST00000575338 HIST1H4AP62805 103 aaKnown RBP4.31□□□□□ -1.72
SMG6-217ENST00000575338 Q6ZR54 194 aa4.31□□□□□ -1.72
SMG6-217ENST00000575338 Q6ZVQ6 151 aa4.31□□□□□ -1.72
SMG6-217ENST00000575338 KRTAP7-1Q8IUC3 87 aa4.31□□□□□ -1.72
SMG6-217ENST00000575338 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
SMG6-217ENST00000575338 DNAH1Q9P2D7 4330 aa4.31□□□□□ -1.72
SMG6-217ENST00000575338 STAB2Q8WWQ8 2551 aa4.31□□□□□ -1.72
SMG6-217ENST00000575338 M0R2N4 97 aa4.3□□□□□ -1.72
SMG6-217ENST00000575338 LINC01547P58512 204 aaPredicted RBP4.3□□□□□ -1.72
SMG6-217ENST00000575338 HAMPP81172 84 aa4.3□□□□□ -1.72
SMG6-217ENST00000575338 NREPQ16612 68 aa4.3□□□□□ -1.72
SMG6-217ENST00000575338 C1orf137Q5JT78 98 aa4.3□□□□□ -1.72
SMG6-217ENST00000575338 C3orf84H3BNL1 204 aa4.29□□□□□ -1.72
SMG6-217ENST00000575338 RTL8CO15255 209 aa4.29□□□□□ -1.72
SMG6-217ENST00000575338 TNP2Q05952 138 aa4.29□□□□□ -1.72
SMG6-217ENST00000575338 SPACA4Q8TDM5 124 aa4.29□□□□□ -1.72
SMG6-217ENST00000575338 ZNF706Q9Y5V0 76 aaPredicted RBP4.29□□□□□ -1.72
SMG6-217ENST00000575338 IGLV5-52A0A0A0MRZ9 124 aa4.28□□□□□ -1.72
SMG6-217ENST00000575338 EPM2AB3EWF7 344 aa4.28□□□□□ -1.72
SMG6-217ENST00000575338 UQCRQO14949 82 aa4.28□□□□□ -1.72
SMG6-217ENST00000575338 LY6G6CO95867 125 aa4.28□□□□□ -1.72
SMG6-217ENST00000575338 SPRR1BP22528 89 aa4.28□□□□□ -1.72
SMG6-217ENST00000575338 PHF5AQ7RTV0 110 aaKnown RBP4.28□□□□□ -1.72
SMG6-217ENST00000575338 Q8NBF4 154 aa4.28□□□□□ -1.72
SMG6-217ENST00000575338 HIGD2AQ9BW72 106 aa4.28□□□□□ -1.72
SMG6-217ENST00000575338 MEGF8Q7Z7M0 2845 aa4.28□□□□□ -1.72
SMG6-217ENST00000575338 IGLV8-61A0A075B6I0 122 aa4.27□□□□□ -1.73
SMG6-217ENST00000575338 CHTF8P0CG12 524 aa4.27□□□□□ -1.73
SMG6-217ENST00000575338 COX7CP15954 63 aa4.27□□□□□ -1.73
SMG6-217ENST00000575338 RPL37AP61513 92 aaKnown RBP4.27□□□□□ -1.73
SMG6-217ENST00000575338 PRLHP81277 87 aa4.27□□□□□ -1.73
SMG6-217ENST00000575338 SPRR4Q96PI1 79 aa4.27□□□□□ -1.73
SMG6-217ENST00000575338 PRKDCP78527 4128 aaKnown RBP4.27□□□□□ -1.73
SMG6-217ENST00000575338 BPY2O14599 106 aa4.26□□□□□ -1.73
SMG6-217ENST00000575338 C3orf22Q8N5N4 141 aa4.26□□□□□ -1.73
SMG6-217ENST00000575338 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
SMG6-217ENST00000575338 ST20-AS1Q8NBB2 130 aa4.26□□□□□ -1.73
SMG6-217ENST00000575338 LINC00476Q8WZB0 136 aa4.26□□□□□ -1.73
SMG6-217ENST00000575338 ERC2-IT1O76042 136 aa4.25□□□□□ -1.73
SMG6-217ENST00000575338 CRYGAP11844 174 aa4.25□□□□□ -1.73
SMG6-217ENST00000575338 PLAC8Q9NZF1 115 aa4.25□□□□□ -1.73
SMG6-217ENST00000575338 DNAH7Q8WXX0 4024 aa4.24□□□□□ -1.73
SMG6-217ENST00000575338 C9orf153Q5TBE3 101 aa4.24□□□□□ -1.73
SMG6-217ENST00000575338 CSMD3Q7Z407 3707 aa4.23□□□□□ -1.73
SMG6-217ENST00000575338 A0A087WVE0 104 aa4.23□□□□□ -1.73
SMG6-217ENST00000575338 A0A1W2PNM2 257 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms