RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 SPAG11AQ6PDA7 123 aa11.29□□□□□ -0.6
SCARF1-208ENST00000574545 Q6ZRX8 168 aa11.29□□□□□ -0.6
SCARF1-208ENST00000574545 TIMM17BO60830 172 aa11.28□□□□□ -0.6
SCARF1-208ENST00000574545 S100A7L2Q5SY68 101 aa11.28□□□□□ -0.6
SCARF1-208ENST00000574545 LINC00308Q8TCZ7 52 aa11.27□□□□□ -0.61
SCARF1-208ENST00000574545 TTTY13Q9BZ97 58 aa11.27□□□□□ -0.61
SCARF1-208ENST00000574545 TRAV23DV6A0A075B6W5 121 aa11.26□□□□□ -0.61
SCARF1-208ENST00000574545 GAGE2AQ6NT46 116 aa11.26□□□□□ -0.61
SCARF1-208ENST00000574545 Q8NBF4 154 aa11.25□□□□□ -0.61
SCARF1-208ENST00000574545 SPANXCQ9NY87 97 aa11.25□□□□□ -0.61
SCARF1-208ENST00000574545 ZNF73O43830 326 aaPredicted RBP11.24□□□□□ -0.61
SCARF1-208ENST00000574545 ZNF815PA8K554 130 aa11.23□□□□□ -0.61
SCARF1-208ENST00000574545 TPRXLQ17RH7 258 aa11.23□□□□□ -0.61
SCARF1-208ENST00000574545 IGLV7-46A0A075B6I9 117 aa11.22□□□□□ -0.61
SCARF1-208ENST00000574545 KRTDAPP60985 99 aa11.22□□□□□ -0.61
SCARF1-208ENST00000574545 JOSD1Q15040 202 aaPredicted RBP11.2□□□□□ -0.62
SCARF1-208ENST00000574545 C4orf48Q5BLP8 95 aa11.2□□□□□ -0.62
SCARF1-208ENST00000574545 ANKRD39Q53RE8 183 aa11.19□□□□□ -0.62
SCARF1-208ENST00000574545 SSBP3-AS1Q7Z2R9 100 aa11.19□□□□□ -0.62
SCARF1-208ENST00000574545 SPINK1P00995 79 aa11.18□□□□□ -0.62
SCARF1-208ENST00000574545 CBY1Q9Y3M2 126 aa11.17□□□□□ -0.62
SCARF1-208ENST00000574545 IGLV9-49A0A0B4J1Y8 123 aa11.16□□□□□ -0.62
SCARF1-208ENST00000574545 C5orf52A6NGY3 159 aa11.16□□□□□ -0.62
SCARF1-208ENST00000574545 MOBPQ13875 183 aa11.16□□□□□ -0.62
SCARF1-208ENST00000574545 ST20-AS1Q8NBB2 130 aa11.16□□□□□ -0.62
SCARF1-208ENST00000574545 SPANXDQ9BXN6 97 aa11.16□□□□□ -0.62
SCARF1-208ENST00000574545 FAT4Q6V0I7 4981 aa11.15□□□□□ -0.62
SCARF1-208ENST00000574545 FP248Q71RG6 208 aaPredicted RBP11.15□□□□□ -0.62
SCARF1-208ENST00000574545 OR13C6PQ8NH95 151 aa11.15□□□□□ -0.62
SCARF1-208ENST00000574545 C20orf202A1L168 122 aa11.14□□□□□ -0.63
SCARF1-208ENST00000574545 LINC00518Q8N0U6 118 aa11.14□□□□□ -0.63
SCARF1-208ENST00000574545 HINT1P49773 126 aaPredicted RBP11.13□□□□□ -0.63
SCARF1-208ENST00000574545 RPS29P62273 56 aaKnown RBP11.13□□□□□ -0.63
SCARF1-208ENST00000574545 ATOH7Q8N100 152 aa11.13□□□□□ -0.63
SCARF1-208ENST00000574545 CDIP1Q9H305 208 aa11.13□□□□□ -0.63
SCARF1-208ENST00000574545 SPRR1BP22528 89 aa11.11□□□□□ -0.63
SCARF1-208ENST00000574545 PCP2Q8IVA1 136 aa11.11□□□□□ -0.63
SCARF1-208ENST00000574545 SCGB1D4Q6XE38 83 aa11.1□□□□□ -0.63
SCARF1-208ENST00000574545 AKR1D1P51857 326 aa11.09□□□□□ -0.63
SCARF1-208ENST00000574545 ELOF1P60002 83 aaKnown RBP11.09□□□□□ -0.63
SCARF1-208ENST00000574545 Q8N377 158 aa11.09□□□□□ -0.63
SCARF1-208ENST00000574545 DHRS4-AS1Q9P1J3 65 aa11.09□□□□□ -0.63
SCARF1-208ENST00000574545 IFITM1P13164 125 aa11.08□□□□□ -0.64
SCARF1-208ENST00000574545 KRTAP13-3Q3SY46 172 aa11.08□□□□□ -0.64
SCARF1-208ENST00000574545 C6orf99Q4VX62 202 aa11.08□□□□□ -0.64
SCARF1-208ENST00000574545 Q6ZVH6 145 aa11.08□□□□□ -0.64
SCARF1-208ENST00000574545 HIST3H2BBQ8N257 126 aa11.08□□□□□ -0.64
SCARF1-208ENST00000574545 MUSTN1Q8IVN3 82 aa11.06□□□□□ -0.64
SCARF1-208ENST00000574545 HIST1H2BLQ99880 126 aa11.06□□□□□ -0.64
SCARF1-208ENST00000574545 COX7BP24311 80 aa11.05□□□□□ -0.64
SCARF1-208ENST00000574545 TRBV7-6A0A0J9YX20 115 aa11.04□□□□□ -0.64
SCARF1-208ENST00000574545 SNRPEP62304 92 aaKnown RBP11.04□□□□□ -0.64
SCARF1-208ENST00000574545 C9orf153Q5TBE3 101 aa11.04□□□□□ -0.64
SCARF1-208ENST00000574545 COPS9Q8WXC6 57 aa11.04□□□□□ -0.64
SCARF1-208ENST00000574545 S100A1P23297 94 aa11.03□□□□□ -0.64
SCARF1-208ENST00000574545 SLC25A20O43772 301 aa11.01□□□□□ -0.65
SCARF1-208ENST00000574545 SLC25A34Q6PIV7 304 aa10.99□□□□□ -0.65
SCARF1-208ENST00000574545 A0A0U1RQV1 116 aa10.98□□□□□ -0.65
SCARF1-208ENST00000574545 A0A1B0GWB2 263 aa10.98□□□□□ -0.65
SCARF1-208ENST00000574545 A6NDN8 102 aa10.98□□□□□ -0.65
SCARF1-208ENST00000574545 S100A2P29034 98 aa10.98□□□□□ -0.65
SCARF1-208ENST00000574545 LINC01547P58512 204 aaPredicted RBP10.97□□□□□ -0.65
SCARF1-208ENST00000574545 LAMTOR3Q9UHA4 124 aa10.97□□□□□ -0.65
SCARF1-208ENST00000574545 SMIM29Q86T20 159 aa10.96□□□□□ -0.65
SCARF1-208ENST00000574545 TAL2Q16559 108 aa10.95□□□□□ -0.66
SCARF1-208ENST00000574545 TRAV13-2A0A0B4J235 113 aa10.94□□□□□ -0.66
SCARF1-208ENST00000574545 TEX49A0A1B0GTD5 131 aa10.94□□□□□ -0.66
SCARF1-208ENST00000574545 IGLV5-48A0A075B6I7 105 aa10.93□□□□□ -0.66
SCARF1-208ENST00000574545 ASB16-AS1Q495Z4 193 aa10.93□□□□□ -0.66
SCARF1-208ENST00000574545 LCE2AQ5TA79 106 aaPredicted RBP10.93□□□□□ -0.66
SCARF1-208ENST00000574545 DEFB105AQ8NG35 78 aa10.93□□□□□ -0.66
SCARF1-208ENST00000574545 SMIM11BQ8TCY0 68 aa10.93□□□□□ -0.66
SCARF1-208ENST00000574545 Q1RN00 199 aa10.92□□□□□ -0.66
SCARF1-208ENST00000574545 A4D1N5 150 aa10.91□□□□□ -0.66
SCARF1-208ENST00000574545 S100A6P06703 90 aa10.91□□□□□ -0.66
SCARF1-208ENST00000574545 HSBP1L1C9JCN9 74 aa10.9□□□□□ -0.66
SCARF1-208ENST00000574545 HRCT1Q6UXD1 115 aa10.89□□□□□ -0.67
SCARF1-208ENST00000574545 CD164Q04900 197 aa10.88□□□□□ -0.67
SCARF1-208ENST00000574545 PRO1933Q9H354 126 aa10.88□□□□□ -0.67
SCARF1-208ENST00000574545 XP32Q5T750 250 aa10.87□□□□□ -0.67
SCARF1-208ENST00000574545 LIMD2Q9BT23 127 aa10.87□□□□□ -0.67
SCARF1-208ENST00000574545 KRTAP4-1Q9BYQ7 146 aa10.86□□□□□ -0.67
SCARF1-208ENST00000574545 NHP2Q9NX24 153 aaKnown RBP10.85□□□□□ -0.67
SCARF1-208ENST00000574545 SCGB1D1O95968 90 aa10.83□□□□□ -0.68
SCARF1-208ENST00000574545 SEC61BP60468 96 aaKnown RBP10.83□□□□□ -0.68
SCARF1-208ENST00000574545 Q5XG85 94 aa10.83□□□□□ -0.68
SCARF1-208ENST00000574545 A0A0G2JQZ4 141 aa10.81□□□□□ -0.68
SCARF1-208ENST00000574545 COX8AP10176 69 aa10.81□□□□□ -0.68
SCARF1-208ENST00000574545 LINC00575Q6W349 94 aa10.81□□□□□ -0.68
SCARF1-208ENST00000574545 H7C2G1 150 aa10.8□□□□□ -0.68
SCARF1-208ENST00000574545 DLEU1O43261 78 aa10.79□□□□□ -0.68
SCARF1-208ENST00000574545 VAMP3Q15836 100 aa10.79□□□□□ -0.68
SCARF1-208ENST00000574545 HIST1H4GQ99525 98 aa10.76□□□□□ -0.69
SCARF1-208ENST00000574545 hADV29S1A0JD25 119 aa10.75□□□□□ -0.69
SCARF1-208ENST00000574545 C1orf195Q5TG92 126 aa10.75□□□□□ -0.69
SCARF1-208ENST00000574545 Q6ZQY7 126 aa10.74□□□□□ -0.69
SCARF1-208ENST00000574545 C12orf57Q99622 126 aa10.74□□□□□ -0.69
SCARF1-208ENST00000574545 C14orf144Q96I85 54 aa10.71□□□□□ -0.69
SCARF1-208ENST00000574545 IGLV8-61A0A075B6I0 122 aa10.7□□□□□ -0.7
SCARF1-208ENST00000574545 C9orf92A6NGG3 77 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms