RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 LRCOL1A6NCL2 159 aa6.86□□□□□ -1.31
USP43-205ENST00000574408 UBE2DNLQ8IWF7 75 aa6.85□□□□□ -1.31
USP43-205ENST00000574408 LINC00575Q6W349 94 aa6.85□□□□□ -1.31
USP43-205ENST00000574408 LINC00167Q96N53 147 aa6.85□□□□□ -1.31
USP43-205ENST00000574408 Q8N9L7 120 aa6.84□□□□□ -1.31
USP43-205ENST00000574408 DIRC1Q969H9 104 aa6.84□□□□□ -1.31
USP43-205ENST00000574408 M0R378 163 aa6.84□□□□□ -1.31
USP43-205ENST00000574408 ZNF73O43830 326 aaPredicted RBP6.83□□□□□ -1.32
USP43-205ENST00000574408 Q6ZQY7 126 aa6.83□□□□□ -1.32
USP43-205ENST00000574408 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
USP43-205ENST00000574408 KRTAP1-5Q9BYS1 174 aa6.83□□□□□ -1.32
USP43-205ENST00000574408 APLNQ9ULZ1 77 aa6.83□□□□□ -1.32
USP43-205ENST00000574408 DNAH1Q9P2D7 4330 aa6.82□□□□□ -1.32
USP43-205ENST00000574408 BRK1Q8WUW1 75 aa6.81□□□□□ -1.32
USP43-205ENST00000574408 TMEM256-PLSCR3K7ERE1 68 aa6.81□□□□□ -1.32
USP43-205ENST00000574408 PRR4Q16378 134 aa6.81□□□□□ -1.32
USP43-205ENST00000574408 NKAPP1Q8N9T2 125 aa6.81□□□□□ -1.32
USP43-205ENST00000574408 COX7BP24311 80 aa6.8□□□□□ -1.32
USP43-205ENST00000574408 SERTAD4-AS1Q5TG53 156 aa6.8□□□□□ -1.32
USP43-205ENST00000574408 OBSCN-AS1Q96MR7 158 aa6.8□□□□□ -1.32
USP43-205ENST00000574408 TLX1NBP0CAT3 122 aa6.8□□□□□ -1.32
USP43-205ENST00000574408 M0R2N4 97 aa6.8□□□□□ -1.32
USP43-205ENST00000574408 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.8□□□□□ -1.32
USP43-205ENST00000574408 C3orf84H3BNL1 204 aa6.79□□□□□ -1.32
USP43-205ENST00000574408 TENM2Q9NT68 2774 aa6.79□□□□□ -1.32
USP43-205ENST00000574408 FAM236DA0A1B0GTK5 79 aa6.79□□□□□ -1.32
USP43-205ENST00000574408 PSCAO43653 123 aa6.79□□□□□ -1.32
USP43-205ENST00000574408 FAM236CP0DP71 79 aa6.79□□□□□ -1.32
USP43-205ENST00000574408 F8WEM9 126 aa6.79□□□□□ -1.32
USP43-205ENST00000574408 CCKP06307 115 aa6.79□□□□□ -1.32
USP43-205ENST00000574408 Q6JHZ5 121 aa6.79□□□□□ -1.32
USP43-205ENST00000574408 LYSTQ99698 3801 aa6.78□□□□□ -1.32
USP43-205ENST00000574408 CRYGAP11844 174 aa6.78□□□□□ -1.32
USP43-205ENST00000574408 ELOF1P60002 83 aaKnown RBP6.78□□□□□ -1.32
USP43-205ENST00000574408 TMEM258P61165 79 aa6.78□□□□□ -1.32
USP43-205ENST00000574408 C7orf33Q8WU49 177 aa6.78□□□□□ -1.32
USP43-205ENST00000574408 OXTP01178 125 aa6.78□□□□□ -1.32
USP43-205ENST00000574408 FAM168BA1KXE4 195 aa6.78□□□□□ -1.32
USP43-205ENST00000574408 JMJD7-PLA2G4BH0Y9G9 81 aa6.78□□□□□ -1.32
USP43-205ENST00000574408 NUPR2A6NF83 97 aa6.77□□□□□ -1.33
USP43-205ENST00000574408 TRBV7-6A0A0J9YX20 115 aa6.76□□□□□ -1.33
USP43-205ENST00000574408 PRKDCP78527 4128 aaKnown RBP6.76□□□□□ -1.33
USP43-205ENST00000574408 DYNC2H1Q8NCM8 4307 aaKnown RBP6.75□□□□□ -1.33
USP43-205ENST00000574408 DNAH10Q8IVF4 4471 aa6.75□□□□□ -1.33
USP43-205ENST00000574408 PLECQ15149 4684 aaKnown RBP6.75□□□□□ -1.33
USP43-205ENST00000574408 PLA2G2DQ9UNK4 145 aa6.75□□□□□ -1.33
USP43-205ENST00000574408 RPL37AP8A6NKH3 93 aa6.75□□□□□ -1.33
USP43-205ENST00000574408 SEC61GP60059 68 aa6.75□□□□□ -1.33
USP43-205ENST00000574408 LINC00528Q8N1L1 170 aa6.75□□□□□ -1.33
USP43-205ENST00000574408 DNHD1Q96M86 4753 aa6.74□□□□□ -1.33
USP43-205ENST00000574408 CSMD3Q7Z407 3707 aa6.74□□□□□ -1.33
USP43-205ENST00000574408 KCNQ1DNQ9H478 68 aa6.74□□□□□ -1.33
USP43-205ENST00000574408 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
USP43-205ENST00000574408 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.73□□□□□ -1.33
USP43-205ENST00000574408 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
USP43-205ENST00000574408 IGLV5-37A0A075B6J1 123 aa6.72□□□□□ -1.33
USP43-205ENST00000574408 IGKV2-24A0A0C4DH68 120 aa6.72□□□□□ -1.33
USP43-205ENST00000574408 NBDYA0A0U1RRE5 68 aa6.72□□□□□ -1.33
USP43-205ENST00000574408 LINC01547P58512 204 aaPredicted RBP6.72□□□□□ -1.33
USP43-205ENST00000574408 Q5XG85 94 aa6.72□□□□□ -1.33
USP43-205ENST00000574408 Q6ZVQ6 151 aa6.72□□□□□ -1.33
USP43-205ENST00000574408 H3BQ85 93 aa6.71□□□□□ -1.33
USP43-205ENST00000574408 CNBPP62633 177 aaKnown RBP6.71□□□□□ -1.34
USP43-205ENST00000574408 LINC00336Q6ZUF6 198 aa6.71□□□□□ -1.34
USP43-205ENST00000574408 MRPL55Q7Z7F7 128 aaKnown RBP6.71□□□□□ -1.34
USP43-205ENST00000574408 IGLV1-50A0A075B6I6 118 aa6.7□□□□□ -1.34
USP43-205ENST00000574408 A0A096LNI7 61 aa6.7□□□□□ -1.34
USP43-205ENST00000574408 NREPQ16612 68 aa6.7□□□□□ -1.34
USP43-205ENST00000574408 C14orf177Q52M58 125 aa6.7□□□□□ -1.34
USP43-205ENST00000574408 MEGF8Q7Z7M0 2845 aa6.7□□□□□ -1.34
USP43-205ENST00000574408 PRYO14603 147 aa6.7□□□□□ -1.34
USP43-205ENST00000574408 DNAH7Q8WXX0 4024 aa6.7□□□□□ -1.34
USP43-205ENST00000574408 ETDCA0A1B0GVM5 59 aa6.69□□□□□ -1.34
USP43-205ENST00000574408 BPY2O14599 106 aa6.69□□□□□ -1.34
USP43-205ENST00000574408 RPS28P62857 69 aaKnown RBP6.69□□□□□ -1.34
USP43-205ENST00000574408 Q6ZQT0 140 aa6.69□□□□□ -1.34
USP43-205ENST00000574408 STARD9Q9P2P6 4700 aa6.69□□□□□ -1.34
USP43-205ENST00000574408 C16orf90A8MZG2 172 aa6.68□□□□□ -1.34
USP43-205ENST00000574408 FAM30AQ9NZY2 134 aa6.68□□□□□ -1.34
USP43-205ENST00000574408 DEFB116Q30KQ4 102 aa6.67□□□□□ -1.34
USP43-205ENST00000574408 Q6ZRX8 168 aa6.67□□□□□ -1.34
USP43-205ENST00000574408 LOC110117498A0A087WWA1 95 aa6.67□□□□□ -1.34
USP43-205ENST00000574408 KRTAP4-16G5E9R7 235 aaPredicted RBP6.67□□□□□ -1.34
USP43-205ENST00000574408 SPRR1AP35321 89 aa6.67□□□□□ -1.34
USP43-205ENST00000574408 A0A1W2PNN7 141 aa6.66□□□□□ -1.34
USP43-205ENST00000574408 DHRS4-AS1Q9P1J3 65 aa6.66□□□□□ -1.34
USP43-205ENST00000574408 CHTF8P0CG12 524 aa6.66□□□□□ -1.34
USP43-205ENST00000574408 Q9BRP9 147 aa6.66□□□□□ -1.34
USP43-205ENST00000574408 Q6ZRN7 208 aaPredicted RBP6.65□□□□□ -1.34
USP43-205ENST00000574408 PDE6GP18545 87 aa6.64□□□□□ -1.35
USP43-205ENST00000574408 TRAV7A0A075B6U4 112 aa6.64□□□□□ -1.35
USP43-205ENST00000574408 REG3GQ6UW15 175 aa6.64□□□□□ -1.35
USP43-205ENST00000574408 PRO0628Q9UI54 55 aa6.64□□□□□ -1.35
USP43-205ENST00000574408 VPS13DQ5THJ4 4388 aa6.64□□□□□ -1.35
USP43-205ENST00000574408 UBE2BP63146 152 aa6.64□□□□□ -1.35
USP43-205ENST00000574408 TRBV7-4A0A0J9YYF1 115 aa6.63□□□□□ -1.35
USP43-205ENST00000574408 C9orf163Q8N9P6 203 aa6.63□□□□□ -1.35
USP43-205ENST00000574408 Q8N377 158 aa6.63□□□□□ -1.35
USP43-205ENST00000574408 HIGD2AQ9BW72 106 aa6.63□□□□□ -1.35
USP43-205ENST00000574408 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms