RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 TRAV23DV6A0A075B6W5 121 aa20■□□□□ 0.79
CTDNEP1-209ENST00000574205 FAT3Q8TDW7 4589 aa19.99■□□□□ 0.79
CTDNEP1-209ENST00000574205 DMBT1Q9UGM3 2413 aaPredicted RBP19.99■□□□□ 0.79
CTDNEP1-209ENST00000574205 KRTAP4-16G5E9R7 235 aaPredicted RBP19.99■□□□□ 0.79
CTDNEP1-209ENST00000574205 HIGD1BQ9P298 99 aa19.99■□□□□ 0.79
CTDNEP1-209ENST00000574205 HIST1H4GQ99525 98 aa19.98■□□□□ 0.79
CTDNEP1-209ENST00000574205 ETDCA0A1B0GVM5 59 aa19.97■□□□□ 0.79
CTDNEP1-209ENST00000574205 J3QL48 77 aa19.97■□□□□ 0.79
CTDNEP1-209ENST00000574205 LINC01600Q96MT4 127 aa19.97■□□□□ 0.79
CTDNEP1-209ENST00000574205 C2orf91Q6ZV80 131 aa19.93■□□□□ 0.78
CTDNEP1-209ENST00000574205 ZNF73O43830 326 aaPredicted RBP19.92■□□□□ 0.78
CTDNEP1-209ENST00000574205 A4D1N5 150 aa19.9■□□□□ 0.78
CTDNEP1-209ENST00000574205 HIGD2AQ9BW72 106 aa19.9■□□□□ 0.78
CTDNEP1-209ENST00000574205 A6NDN8 102 aa19.89■□□□□ 0.77
CTDNEP1-209ENST00000574205 B5MCH6 92 aa19.89■□□□□ 0.77
CTDNEP1-209ENST00000574205 KRTAP1-4P0C5Y4 121 aa19.89■□□□□ 0.77
CTDNEP1-209ENST00000574205 TRAV13-2A0A0B4J235 113 aa19.88■□□□□ 0.77
CTDNEP1-209ENST00000574205 MT1HL1P0DM35 61 aa19.86■□□□□ 0.77
CTDNEP1-209ENST00000574205 Q6ZRX8 168 aa19.86■□□□□ 0.77
CTDNEP1-209ENST00000574205 HINT1P49773 126 aaPredicted RBP19.84■□□□□ 0.77
CTDNEP1-209ENST00000574205 SMIM6P0DI80 62 aa19.81■□□□□ 0.76
CTDNEP1-209ENST00000574205 TAL2Q16559 108 aa19.81■□□□□ 0.76
CTDNEP1-209ENST00000574205 SMCR5Q8TEV8 140 aa19.8■□□□□ 0.76
CTDNEP1-209ENST00000574205 UQCR10Q9UDW1 63 aa19.8■□□□□ 0.76
CTDNEP1-209ENST00000574205 KRTAP10-8P60410 259 aa19.77■□□□□ 0.76
CTDNEP1-209ENST00000574205 C6orf99Q4VX62 202 aa19.77■□□□□ 0.76
CTDNEP1-209ENST00000574205 LOC105371267A0A1B0GV96 52 aa19.76■□□□□ 0.75
CTDNEP1-209ENST00000574205 Q9BRP9 147 aa19.76■□□□□ 0.75
CTDNEP1-209ENST00000574205 PRR26Q8N8Z3 221 aa19.76■□□□□ 0.75
CTDNEP1-209ENST00000574205 CEND1Q8N111 149 aa19.75■□□□□ 0.75
CTDNEP1-209ENST00000574205 C12orf57Q99622 126 aa19.75■□□□□ 0.75
CTDNEP1-209ENST00000574205 ZNF706Q9Y5V0 76 aaPredicted RBP19.72■□□□□ 0.75
CTDNEP1-209ENST00000574205 RPL13AP40429 203 aaKnown RBP19.71■□□□□ 0.75
CTDNEP1-209ENST00000574205 ELOF1P60002 83 aaKnown RBP19.71■□□□□ 0.75
CTDNEP1-209ENST00000574205 SMIM11BQ8TCY0 68 aa19.71■□□□□ 0.75
CTDNEP1-209ENST00000574205 TRBV7-6A0A0J9YX20 115 aa19.7■□□□□ 0.74
CTDNEP1-209ENST00000574205 SPRR4Q96PI1 79 aa19.7■□□□□ 0.74
CTDNEP1-209ENST00000574205 TNXBP22105 4242 aa19.69■□□□□ 0.74
CTDNEP1-209ENST00000574205 COX7BP24311 80 aa19.69■□□□□ 0.74
CTDNEP1-209ENST00000574205 ANAPC11Q9NYG5 84 aa19.69■□□□□ 0.74
CTDNEP1-209ENST00000574205 ERC2-IT1O76042 136 aa19.68■□□□□ 0.74
CTDNEP1-209ENST00000574205 FAM229BQ4G0N7 80 aa19.68■□□□□ 0.74
CTDNEP1-209ENST00000574205 TMEM238LA0A1B0GVL6 79 aa19.67■□□□□ 0.74
CTDNEP1-209ENST00000574205 A6NJY4 79 aa19.67■□□□□ 0.74
CTDNEP1-209ENST00000574205 CFC1BP0CG36 223 aa19.67■□□□□ 0.74
CTDNEP1-209ENST00000574205 CFC1P0CG37 223 aa19.67■□□□□ 0.74
CTDNEP1-209ENST00000574205 CRYGAP11844 174 aa19.67■□□□□ 0.74
CTDNEP1-209ENST00000574205 HSD52Q0P140 79 aa19.67■□□□□ 0.74
CTDNEP1-209ENST00000574205 A0A087X002 238 aa19.66■□□□□ 0.74
CTDNEP1-209ENST00000574205 A0A1B0GWB2 263 aa19.66■□□□□ 0.74
CTDNEP1-209ENST00000574205 DHRS4-AS1Q9P1J3 65 aa19.66■□□□□ 0.74
CTDNEP1-209ENST00000574205 A0A0B4J2C4 111 aa19.64■□□□□ 0.73
CTDNEP1-209ENST00000574205 RAB37Q96AX2 223 aa19.63■□□□□ 0.73
CTDNEP1-209ENST00000574205 FXYD2P54710 66 aa19.62■□□□□ 0.73
CTDNEP1-209ENST00000574205 PRO1933Q9H354 126 aa19.62■□□□□ 0.73
CTDNEP1-209ENST00000574205 HERC1Q15751 4861 aa19.59■□□□□ 0.73
CTDNEP1-209ENST00000574205 VAMP3Q15836 100 aa19.56■□□□□ 0.72
CTDNEP1-209ENST00000574205 LINC00483Q53H64 154 aa19.56■□□□□ 0.72
CTDNEP1-209ENST00000574205 GAGE2AQ6NT46 116 aa19.56■□□□□ 0.72
CTDNEP1-209ENST00000574205 KRTAP13-2Q52LG2 175 aa19.55■□□□□ 0.72
CTDNEP1-209ENST00000574205 TYMSOSQ8TAI1 123 aa19.54■□□□□ 0.72
CTDNEP1-209ENST00000574205 H7C2G1 150 aa19.51■□□□□ 0.71
CTDNEP1-209ENST00000574205 PRO1854Q9UHT4 67 aa19.51■□□□□ 0.71
CTDNEP1-209ENST00000574205 ST20-AS1Q8NBB2 130 aa19.51■□□□□ 0.71
CTDNEP1-209ENST00000574205 BVES-AS1Q5T3Y7 98 aa19.5■□□□□ 0.71
CTDNEP1-209ENST00000574205 NHP2Q9NX24 153 aaKnown RBP19.49■□□□□ 0.71
CTDNEP1-209ENST00000574205 TSTD3H0UI37 97 aa19.45■□□□□ 0.7
CTDNEP1-209ENST00000574205 C3orf22Q8N5N4 141 aa19.45■□□□□ 0.7
CTDNEP1-209ENST00000574205 SLC25A20O43772 301 aa19.44■□□□□ 0.7
CTDNEP1-209ENST00000574205 Q1RN00 199 aa19.44■□□□□ 0.7
CTDNEP1-209ENST00000574205 LINC00575Q6W349 94 aa19.42■□□□□ 0.7
CTDNEP1-209ENST00000574205 SPRR1BP22528 89 aa19.4■□□□□ 0.7
CTDNEP1-209ENST00000574205 CTAG1AP78358 180 aa19.39■□□□□ 0.69
CTDNEP1-209ENST00000574205 K7ERJ3 54 aa19.38■□□□□ 0.69
CTDNEP1-209ENST00000574205 hADV29S1A0JD25 119 aa19.35■□□□□ 0.69
CTDNEP1-209ENST00000574205 IGLV9-49A0A0B4J1Y8 123 aa19.34■□□□□ 0.69
CTDNEP1-209ENST00000574205 DEFB105AQ8NG35 78 aa19.34■□□□□ 0.69
CTDNEP1-209ENST00000574205 TEX49A0A1B0GTD5 131 aa19.33■□□□□ 0.68
CTDNEP1-209ENST00000574205 M0R143 59 aa19.33■□□□□ 0.68
CTDNEP1-209ENST00000574205 IGLV5-48A0A075B6I7 105 aa19.32■□□□□ 0.68
CTDNEP1-209ENST00000574205 H0YGX0 51 aa19.32■□□□□ 0.68
CTDNEP1-209ENST00000574205 LINC00304Q8N9R0 145 aa19.31■□□□□ 0.68
CTDNEP1-209ENST00000574205 LINC01547P58512 204 aaPredicted RBP19.3■□□□□ 0.68
CTDNEP1-209ENST00000574205 MOBPQ13875 183 aa19.3■□□□□ 0.68
CTDNEP1-209ENST00000574205 TRIAP1O43715 76 aa19.27■□□□□ 0.68
CTDNEP1-209ENST00000574205 Q6ZQY7 126 aa19.27■□□□□ 0.68
CTDNEP1-209ENST00000574205 LAMTOR3Q9UHA4 124 aa19.27■□□□□ 0.68
CTDNEP1-209ENST00000574205 SSBP3-AS1Q7Z2R9 100 aa19.26■□□□□ 0.67
CTDNEP1-209ENST00000574205 TSPAN13O95857 204 aa19.25■□□□□ 0.67
CTDNEP1-209ENST00000574205 C9orf153Q5TBE3 101 aa19.25■□□□□ 0.67
CTDNEP1-209ENST00000574205 Q8NBF4 154 aa19.25■□□□□ 0.67
CTDNEP1-209ENST00000574205 SNCGO76070 127 aa19.24■□□□□ 0.67
CTDNEP1-209ENST00000574205 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP19.23■□□□□ 0.67
CTDNEP1-209ENST00000574205 PSMB2P49721 201 aa19.22■□□□□ 0.67
CTDNEP1-209ENST00000574205 Q8N377 158 aa19.21■□□□□ 0.67
CTDNEP1-209ENST00000574205 FAM218AQ96MZ4 157 aa19.21■□□□□ 0.67
CTDNEP1-209ENST00000574205 SPAG11AQ6PDA7 123 aa19.2■□□□□ 0.66
CTDNEP1-209ENST00000574205 SMIM29Q86T20 159 aa19.19■□□□□ 0.66
CTDNEP1-209ENST00000574205 COX6CP09669 75 aa19.18■□□□□ 0.66
CTDNEP1-209ENST00000574205 A0A1B0GX51 115 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms