RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 C3orf22Q8N5N4 141 aa5.82□□□□□ -1.48
RPA1-206ENST00000573994 LINC00304Q8N9R0 145 aa5.82□□□□□ -1.48
RPA1-206ENST00000573994 SPRR1AP35321 89 aa5.81□□□□□ -1.48
RPA1-206ENST00000573994 RETNLBQ9BQ08 111 aa5.81□□□□□ -1.48
RPA1-206ENST00000573994 MIEN1Q9BRT3 115 aa5.81□□□□□ -1.48
RPA1-206ENST00000573994 ETDCA0A1B0GVM5 59 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 HIST1H2BKO60814 126 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 NDUFC2O95298 119 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 HIST1H2BJP06899 126 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 HIST1H2BOP23527 126 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 HIST1H2BBP33778 126 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 HIST1H2BDP58876 126 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 NPC2P61916 151 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 HIST1H2BCP62807 126 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 HIST2H2BEQ16778 126 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.8□□□□□ -1.48
RPA1-206ENST00000573994 HIST1H2BHQ93079 126 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 SPRR4Q96PI1 79 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 HIST1H2BNQ99877 126 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 HIST1H2BMQ99879 126 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 MUC2Q02817 5179 aa5.8□□□□□ -1.48
RPA1-206ENST00000573994 E9PLD3 99 aa5.79□□□□□ -1.48
RPA1-206ENST00000573994 SYS1-DBNDD2H3BUS1 97 aa5.79□□□□□ -1.48
RPA1-206ENST00000573994 SPAG11AQ6PDA7 123 aa5.79□□□□□ -1.48
RPA1-206ENST00000573994 PPDPFQ9H3Y8 114 aa5.79□□□□□ -1.48
RPA1-206ENST00000573994 SPANXB1Q9NS25 103 aaPredicted RBP5.79□□□□□ -1.48
RPA1-206ENST00000573994 CBY1Q9Y3M2 126 aa5.79□□□□□ -1.48
RPA1-206ENST00000573994 KRTAP4-16G5E9R7 235 aaPredicted RBP5.78□□□□□ -1.48
RPA1-206ENST00000573994 DDTP30046 118 aa5.78□□□□□ -1.48
RPA1-206ENST00000573994 PET117Q6UWS5 81 aa5.78□□□□□ -1.48
RPA1-206ENST00000573994 SMCR5Q8TEV8 140 aa5.78□□□□□ -1.48
RPA1-206ENST00000573994 A0A0J9YXY3 114 aa5.77□□□□□ -1.49
RPA1-206ENST00000573994 SOSTDC1Q6X4U4 206 aa5.77□□□□□ -1.49
RPA1-206ENST00000573994 MUC17Q685J3 4493 aa5.77□□□□□ -1.49
RPA1-206ENST00000573994 B5MCH6 92 aa5.76□□□□□ -1.49
RPA1-206ENST00000573994 COA6Q5JTJ3 125 aaKnown RBP5.76□□□□□ -1.49
RPA1-206ENST00000573994 S100A7L2Q5SY68 101 aa5.76□□□□□ -1.49
RPA1-206ENST00000573994 ADAMTSL4-AS1Q5T5F5 129 aa5.76□□□□□ -1.49
RPA1-206ENST00000573994 LINC01545Q5VT33 79 aa5.76□□□□□ -1.49
RPA1-206ENST00000573994 TIMM17BO60830 172 aa5.75□□□□□ -1.49
RPA1-206ENST00000573994 ERC2-IT1O76042 136 aa5.75□□□□□ -1.49
RPA1-206ENST00000573994 IGLV6-57P01721 117 aa5.75□□□□□ -1.49
RPA1-206ENST00000573994 AKR1D1P51857 326 aa5.75□□□□□ -1.49
RPA1-206ENST00000573994 JOSD1Q15040 202 aaPredicted RBP5.75□□□□□ -1.49
RPA1-206ENST00000573994 TRAV23DV6A0A075B6W5 121 aa5.74□□□□□ -1.49
RPA1-206ENST00000573994 C5orf52A6NGY3 159 aa5.74□□□□□ -1.49
RPA1-206ENST00000573994 LINC00483Q53H64 154 aa5.74□□□□□ -1.49
RPA1-206ENST00000573994 GAGE2AQ6NT46 116 aa5.74□□□□□ -1.49
RPA1-206ENST00000573994 Q6ZRX8 168 aa5.74□□□□□ -1.49
RPA1-206ENST00000573994 Q8NBF4 154 aa5.74□□□□□ -1.49
RPA1-206ENST00000573994 Q9BRP9 147 aa5.74□□□□□ -1.49
RPA1-206ENST00000573994 TTTY13Q9BZ97 58 aa5.74□□□□□ -1.49
RPA1-206ENST00000573994 C3orf79P0CE67 100 aa5.73□□□□□ -1.49
RPA1-206ENST00000573994 HINT1P49773 126 aaPredicted RBP5.73□□□□□ -1.49
RPA1-206ENST00000573994 KRTDAPP60985 99 aa5.73□□□□□ -1.49
RPA1-206ENST00000573994 LITAFQ99732 161 aa5.73□□□□□ -1.49
RPA1-206ENST00000573994 IGLV7-46A0A075B6I9 117 aa5.72□□□□□ -1.49
RPA1-206ENST00000573994 IGLV9-49A0A0B4J1Y8 123 aa5.72□□□□□ -1.49
RPA1-206ENST00000573994 C20orf202A1L168 122 aa5.72□□□□□ -1.49
RPA1-206ENST00000573994 ZNF815PA8K554 130 aa5.72□□□□□ -1.49
RPA1-206ENST00000573994 MOBPQ13875 183 aa5.72□□□□□ -1.49
RPA1-206ENST00000573994 LINC00308Q8TCZ7 52 aa5.72□□□□□ -1.49
RPA1-206ENST00000573994 COPS9Q8WXC6 57 aa5.72□□□□□ -1.49
RPA1-206ENST00000573994 SPANXCQ9NY87 97 aa5.72□□□□□ -1.49
RPA1-206ENST00000573994 ZNF73O43830 326 aaPredicted RBP5.71□□□□□ -1.5
RPA1-206ENST00000573994 SPINK1P00995 79 aa5.71□□□□□ -1.5
RPA1-206ENST00000573994 SSBP3-AS1Q7Z2R9 100 aa5.71□□□□□ -1.5
RPA1-206ENST00000573994 LINC00518Q8N0U6 118 aa5.71□□□□□ -1.5
RPA1-206ENST00000573994 TPRXLQ17RH7 258 aa5.7□□□□□ -1.5
RPA1-206ENST00000573994 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
RPA1-206ENST00000573994 RPS29P62273 56 aaKnown RBP5.69□□□□□ -1.5
RPA1-206ENST00000573994 FP248Q71RG6 208 aaPredicted RBP5.69□□□□□ -1.5
RPA1-206ENST00000573994 ATOH7Q8N100 152 aa5.69□□□□□ -1.5
RPA1-206ENST00000573994 ST20-AS1Q8NBB2 130 aa5.69□□□□□ -1.5
RPA1-206ENST00000573994 OR13C6PQ8NH95 151 aa5.69□□□□□ -1.5
RPA1-206ENST00000573994 SPANXDQ9BXN6 97 aa5.69□□□□□ -1.5
RPA1-206ENST00000573994 SNRPEP62304 92 aaKnown RBP5.68□□□□□ -1.5
RPA1-206ENST00000573994 Q6ZVH6 145 aa5.68□□□□□ -1.5
RPA1-206ENST00000573994 FAT4Q6V0I7 4981 aa5.67□□□□□ -1.5
RPA1-206ENST00000573994 A0A0U1RQV1 116 aa5.67□□□□□ -1.5
RPA1-206ENST00000573994 C9orf153Q5TBE3 101 aa5.67□□□□□ -1.5
RPA1-206ENST00000573994 SLC25A34Q6PIV7 304 aa5.67□□□□□ -1.5
RPA1-206ENST00000573994 SCGB1D4Q6XE38 83 aa5.67□□□□□ -1.5
RPA1-206ENST00000573994 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
RPA1-206ENST00000573994 DHRS4-AS1Q9P1J3 65 aa5.67□□□□□ -1.5
RPA1-206ENST00000573994 IFITM1P13164 125 aa5.66□□□□□ -1.5
RPA1-206ENST00000573994 TRBV7-6A0A0J9YX20 115 aa5.64□□□□□ -1.51
RPA1-206ENST00000573994 S100A1P23297 94 aa5.64□□□□□ -1.51
RPA1-206ENST00000573994 PCP2Q8IVA1 136 aa5.64□□□□□ -1.51
RPA1-206ENST00000573994 SLC25A20O43772 301 aa5.63□□□□□ -1.51
RPA1-206ENST00000573994 SPRR1BP22528 89 aa5.63□□□□□ -1.51
RPA1-206ENST00000573994 COX7BP24311 80 aa5.63□□□□□ -1.51
RPA1-206ENST00000573994 ELOF1P60002 83 aaKnown RBP5.63□□□□□ -1.51
RPA1-206ENST00000573994 C6orf99Q4VX62 202 aa5.63□□□□□ -1.51
RPA1-206ENST00000573994 S100A2P29034 98 aa5.62□□□□□ -1.51
RPA1-206ENST00000573994 Q8N377 158 aa5.62□□□□□ -1.51
RPA1-206ENST00000573994 A4D1N5 150 aa5.61□□□□□ -1.51
RPA1-206ENST00000573994 KRTAP13-3Q3SY46 172 aa5.61□□□□□ -1.51
RPA1-206ENST00000573994 LAMTOR3Q9UHA4 124 aa5.61□□□□□ -1.51
RPA1-206ENST00000573994 TRAV13-2A0A0B4J235 113 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms