RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 ADAMTSL4-AS1Q5T5F5 129 aa7.06□□□□□ -1.28
CCDC40-210ENST00000573903 LITAFQ99732 161 aa7.06□□□□□ -1.28
CCDC40-210ENST00000573903 KCNQ1DNQ9H478 68 aa7.06□□□□□ -1.28
CCDC40-210ENST00000573903 SPANXCQ9NY87 97 aa7.06□□□□□ -1.28
CCDC40-210ENST00000573903 ETDCA0A1B0GVM5 59 aa7.05□□□□□ -1.28
CCDC40-210ENST00000573903 C5orf52A6NGY3 159 aa7.05□□□□□ -1.28
CCDC40-210ENST00000573903 SOSTDC1Q6X4U4 206 aa7.05□□□□□ -1.28
CCDC40-210ENST00000573903 LINC00337Q8N6G1 96 aa7.05□□□□□ -1.28
CCDC40-210ENST00000573903 LINC00308Q8TCZ7 52 aa7.05□□□□□ -1.28
CCDC40-210ENST00000573903 COPS9Q8WXC6 57 aa7.05□□□□□ -1.28
CCDC40-210ENST00000573903 HIGD2AQ9BW72 106 aa7.05□□□□□ -1.28
CCDC40-210ENST00000573903 KRTAP9-2Q9BYQ4 174 aa7.05□□□□□ -1.28
CCDC40-210ENST00000573903 CBY1Q9Y3M2 126 aa7.05□□□□□ -1.28
CCDC40-210ENST00000573903 SPRR1AP35321 89 aa7.04□□□□□ -1.28
CCDC40-210ENST00000573903 SPANXDQ9BXN6 97 aa7.04□□□□□ -1.28
CCDC40-210ENST00000573903 C4orf48Q5BLP8 95 aa7.03□□□□□ -1.28
CCDC40-210ENST00000573903 SPAG11AQ6PDA7 123 aa7.03□□□□□ -1.28
CCDC40-210ENST00000573903 ZNF706Q9Y5V0 76 aaPredicted RBP7.03□□□□□ -1.28
CCDC40-210ENST00000573903 TRAV23DV6A0A075B6W5 121 aa7.02□□□□□ -1.29
CCDC40-210ENST00000573903 SCGB1D1O95968 90 aa7.02□□□□□ -1.29
CCDC40-210ENST00000573903 IGLV6-57P01721 117 aa7.02□□□□□ -1.29
CCDC40-210ENST00000573903 Q6ZVH6 145 aa7.02□□□□□ -1.29
CCDC40-210ENST00000573903 PCP2Q8IVA1 136 aa7.02□□□□□ -1.29
CCDC40-210ENST00000573903 C3orf22Q8N5N4 141 aa7.02□□□□□ -1.29
CCDC40-210ENST00000573903 PPDPFQ9H3Y8 114 aa7.02□□□□□ -1.29
CCDC40-210ENST00000573903 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
CCDC40-210ENST00000573903 IFITM1P13164 125 aa7.01□□□□□ -1.29
CCDC40-210ENST00000573903 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
CCDC40-210ENST00000573903 TMA7Q9Y2S6 64 aaKnown RBP7.01□□□□□ -1.29
CCDC40-210ENST00000573903 LINC00518Q8N0U6 118 aa7□□□□□ -1.29
CCDC40-210ENST00000573903 SPRR4Q96PI1 79 aa7□□□□□ -1.29
CCDC40-210ENST00000573903 KRTAP4-16G5E9R7 235 aaPredicted RBP6.99□□□□□ -1.29
CCDC40-210ENST00000573903 FP248Q71RG6 208 aaPredicted RBP6.99□□□□□ -1.29
CCDC40-210ENST00000573903 OR13C6PQ8NH95 151 aa6.99□□□□□ -1.29
CCDC40-210ENST00000573903 ZNF73O43830 326 aaPredicted RBP6.98□□□□□ -1.29
CCDC40-210ENST00000573903 HINT1P49773 126 aaPredicted RBP6.98□□□□□ -1.29
CCDC40-210ENST00000573903 JOSD1Q15040 202 aaPredicted RBP6.98□□□□□ -1.29
CCDC40-210ENST00000573903 Q6ZRX8 168 aa6.98□□□□□ -1.29
CCDC40-210ENST00000573903 B5MCH6 92 aa6.97□□□□□ -1.29
CCDC40-210ENST00000573903 Q8NBF4 154 aa6.95□□□□□ -1.3
CCDC40-210ENST00000573903 SMCR5Q8TEV8 140 aa6.95□□□□□ -1.3
CCDC40-210ENST00000573903 MUSTN1Q8IVN3 82 aa6.94□□□□□ -1.3
CCDC40-210ENST00000573903 SPINK1P00995 79 aa6.93□□□□□ -1.3
CCDC40-210ENST00000573903 COX8AP10176 69 aa6.93□□□□□ -1.3
CCDC40-210ENST00000573903 VAMP8Q9BV40 100 aa6.93□□□□□ -1.3
CCDC40-210ENST00000573903 TRAV13-2A0A0B4J235 113 aa6.92□□□□□ -1.3
CCDC40-210ENST00000573903 A6NDN8 102 aa6.92□□□□□ -1.3
CCDC40-210ENST00000573903 Q9BRP9 147 aa6.92□□□□□ -1.3
CCDC40-210ENST00000573903 PAM16Q9Y3D7 125 aa6.92□□□□□ -1.3
CCDC40-210ENST00000573903 FAT4Q6V0I7 4981 aa6.91□□□□□ -1.3
CCDC40-210ENST00000573903 DLEU1O43261 78 aa6.91□□□□□ -1.3
CCDC40-210ENST00000573903 SPATA45Q537H7 98 aa6.91□□□□□ -1.3
CCDC40-210ENST00000573903 MUC17Q685J3 4493 aa6.9□□□□□ -1.3
CCDC40-210ENST00000573903 COX7BP24311 80 aa6.9□□□□□ -1.3
CCDC40-210ENST00000573903 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
CCDC40-210ENST00000573903 C6orf99Q4VX62 202 aa6.9□□□□□ -1.3
CCDC40-210ENST00000573903 GAGE2AQ6NT46 116 aa6.9□□□□□ -1.3
CCDC40-210ENST00000573903 DHRS4-AS1Q9P1J3 65 aa6.9□□□□□ -1.3
CCDC40-210ENST00000573903 ERC2-IT1O76042 136 aa6.89□□□□□ -1.31
CCDC40-210ENST00000573903 ELOF1P60002 83 aaKnown RBP6.89□□□□□ -1.31
CCDC40-210ENST00000573903 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
CCDC40-210ENST00000573903 LINC00483Q53H64 154 aa6.89□□□□□ -1.31
CCDC40-210ENST00000573903 HIST1H4GQ99525 98 aa6.89□□□□□ -1.31
CCDC40-210ENST00000573903 IGLV9-49A0A0B4J1Y8 123 aa6.88□□□□□ -1.31
CCDC40-210ENST00000573903 TRBV7-6A0A0J9YX20 115 aa6.88□□□□□ -1.31
CCDC40-210ENST00000573903 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
CCDC40-210ENST00000573903 LINC01547P58512 204 aaPredicted RBP6.88□□□□□ -1.31
CCDC40-210ENST00000573903 MOBPQ13875 183 aa6.88□□□□□ -1.31
CCDC40-210ENST00000573903 ASB16-AS1Q495Z4 193 aa6.88□□□□□ -1.31
CCDC40-210ENST00000573903 A0A1B0GWB2 263 aa6.87□□□□□ -1.31
CCDC40-210ENST00000573903 A4D1N5 150 aa6.87□□□□□ -1.31
CCDC40-210ENST00000573903 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
CCDC40-210ENST00000573903 SLC25A34Q6PIV7 304 aa6.87□□□□□ -1.31
CCDC40-210ENST00000573903 C14orf144Q96I85 54 aa6.87□□□□□ -1.31
CCDC40-210ENST00000573903 SSBP3-AS1Q7Z2R9 100 aa6.86□□□□□ -1.31
CCDC40-210ENST00000573903 HIGD1BQ9P298 99 aa6.86□□□□□ -1.31
CCDC40-210ENST00000573903 LOC105371267A0A1B0GV96 52 aa6.85□□□□□ -1.31
CCDC40-210ENST00000573903 SLC25A20O43772 301 aa6.84□□□□□ -1.31
CCDC40-210ENST00000573903 PYY3Q5JQD4 70 aa6.84□□□□□ -1.31
CCDC40-210ENST00000573903 SMIM11BQ8TCY0 68 aa6.84□□□□□ -1.31
CCDC40-210ENST00000573903 NHP2Q9NX24 153 aaKnown RBP6.84□□□□□ -1.31
CCDC40-210ENST00000573903 C9orf153Q5TBE3 101 aa6.83□□□□□ -1.32
CCDC40-210ENST00000573903 Q8N377 158 aa6.83□□□□□ -1.32
CCDC40-210ENST00000573903 ST20-AS1Q8NBB2 130 aa6.83□□□□□ -1.32
CCDC40-210ENST00000573903 C12orf57Q99622 126 aa6.83□□□□□ -1.32
CCDC40-210ENST00000573903 VAMP3Q15836 100 aa6.82□□□□□ -1.32
CCDC40-210ENST00000573903 C2orf91Q6ZV80 131 aa6.82□□□□□ -1.32
CCDC40-210ENST00000573903 SPRR1BP22528 89 aa6.81□□□□□ -1.32
CCDC40-210ENST00000573903 TAL2Q16559 108 aa6.81□□□□□ -1.32
CCDC40-210ENST00000573903 TMEM238LA0A1B0GVL6 79 aa6.8□□□□□ -1.32
CCDC40-210ENST00000573903 A6NJY4 79 aa6.8□□□□□ -1.32
CCDC40-210ENST00000573903 RAB37Q96AX2 223 aa6.8□□□□□ -1.32
CCDC40-210ENST00000573903 LAMTOR3Q9UHA4 124 aa6.79□□□□□ -1.32
CCDC40-210ENST00000573903 A0A0B4J2C4 111 aa6.78□□□□□ -1.32
CCDC40-210ENST00000573903 TEX49A0A1B0GTD5 131 aa6.78□□□□□ -1.32
CCDC40-210ENST00000573903 BVES-AS1Q5T3Y7 98 aa6.78□□□□□ -1.32
CCDC40-210ENST00000573903 XP32Q5T750 250 aa6.77□□□□□ -1.33
CCDC40-210ENST00000573903 CEND1Q8N111 149 aa6.77□□□□□ -1.33
CCDC40-210ENST00000573903 DEFB105AQ8NG35 78 aa6.77□□□□□ -1.33
CCDC40-210ENST00000573903 KRTAP4-1Q9BYQ7 146 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms