RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 IGLC3P0DOY3 106 aa6.61□□□□□ -1.35
PRPF8-208ENST00000573716 BOD1L2Q8IYS8 172 aa6.61□□□□□ -1.35
PRPF8-208ENST00000573716 LINC01549A6NIU2 74 aa6.6□□□□□ -1.35
PRPF8-208ENST00000573716 SPRR1AP35321 89 aa6.6□□□□□ -1.35
PRPF8-208ENST00000573716 YPEL4Q96NS1 127 aa6.6□□□□□ -1.35
PRPF8-208ENST00000573716 KCNQ1DNQ9H478 68 aa6.6□□□□□ -1.35
PRPF8-208ENST00000573716 TRBV10-3A0A0K0K1G6 114 aa6.59□□□□□ -1.35
PRPF8-208ENST00000573716 KRTAP4-16G5E9R7 235 aaPredicted RBP6.59□□□□□ -1.35
PRPF8-208ENST00000573716 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.35
PRPF8-208ENST00000573716 COL5A1-AS1Q5SY13 56 aa6.58□□□□□ -1.36
PRPF8-208ENST00000573716 TMEM170BQ5T4T1 132 aa6.58□□□□□ -1.36
PRPF8-208ENST00000573716 SFTA2Q6UW10 78 aa6.58□□□□□ -1.36
PRPF8-208ENST00000573716 FA2HQ7L5A8 372 aa6.58□□□□□ -1.36
PRPF8-208ENST00000573716 B5MCH6 92 aa6.57□□□□□ -1.36
PRPF8-208ENST00000573716 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
PRPF8-208ENST00000573716 TRAV9-1A0A075B6T8 112 aa6.56□□□□□ -1.36
PRPF8-208ENST00000573716 C20orf202A1L168 122 aa6.56□□□□□ -1.36
PRPF8-208ENST00000573716 SMIM13P0DJ93 91 aa6.56□□□□□ -1.36
PRPF8-208ENST00000573716 HRCT1Q6UXD1 115 aa6.56□□□□□ -1.36
PRPF8-208ENST00000573716 KRTAP4-8Q9BYQ9 185 aa6.56□□□□□ -1.36
PRPF8-208ENST00000573716 C11orf86A6NJI1 115 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST1H2BKO60814 126 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST1H2BJP06899 126 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST1H2BOP23527 126 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST1H2BBP33778 126 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST1H2BDP58876 126 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST1H2BCP62807 126 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST2H2BEQ16778 126 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 MEIG1Q5JSS6 88 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST1H2BHQ93079 126 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST1H2BNQ99877 126 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST1H2BMQ99879 126 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 HIST1H2BLQ99880 126 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 SNHG12Q9BXW3 62 aa6.55□□□□□ -1.36
PRPF8-208ENST00000573716 LINC01546A6NGU7 62 aa6.54□□□□□ -1.36
PRPF8-208ENST00000573716 IGLV6-57P01721 117 aa6.54□□□□□ -1.36
PRPF8-208ENST00000573716 MIR7-3HGQ8N6C7 128 aa6.54□□□□□ -1.36
PRPF8-208ENST00000573716 Q9BRP9 147 aa6.54□□□□□ -1.36
PRPF8-208ENST00000573716 FABP4P15090 132 aa6.53□□□□□ -1.36
PRPF8-208ENST00000573716 MIEN1Q9BRT3 115 aa6.53□□□□□ -1.36
PRPF8-208ENST00000573716 LIMD2Q9BT23 127 aa6.53□□□□□ -1.36
PRPF8-208ENST00000573716 BAGE3Q86Y29 109 aa6.52□□□□□ -1.37
PRPF8-208ENST00000573716 PRO1933Q9H354 126 aa6.52□□□□□ -1.37
PRPF8-208ENST00000573716 SCGB1A1P11684 91 aa6.51□□□□□ -1.37
PRPF8-208ENST00000573716 Q6ZRX8 168 aa6.51□□□□□ -1.37
PRPF8-208ENST00000573716 UBE2V1Q13404 147 aa6.5□□□□□ -1.37
PRPF8-208ENST00000573716 ST20-AS1Q8NBB2 130 aa6.5□□□□□ -1.37
PRPF8-208ENST00000573716 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
PRPF8-208ENST00000573716 K7ERU9 68 aa6.49□□□□□ -1.37
PRPF8-208ENST00000573716 PMCHL1Q16048 86 aa6.49□□□□□ -1.37
PRPF8-208ENST00000573716 Q6Q795 121 aa6.49□□□□□ -1.37
PRPF8-208ENST00000573716 A0A096LNJ9 63 aa6.48□□□□□ -1.37
PRPF8-208ENST00000573716 TRGC2P03986 189 aa6.48□□□□□ -1.37
PRPF8-208ENST00000573716 MTURNQ8N3F0 131 aa6.48□□□□□ -1.37
PRPF8-208ENST00000573716 TMEM223A0PJW6 202 aa6.47□□□□□ -1.37
PRPF8-208ENST00000573716 HBDP02042 147 aa6.47□□□□□ -1.37
PRPF8-208ENST00000573716 S100A7L2Q5SY68 101 aa6.46□□□□□ -1.38
PRPF8-208ENST00000573716 MAP1LC3CQ9BXW4 147 aa6.46□□□□□ -1.38
PRPF8-208ENST00000573716 C9orf118A6NHY6 69 aa6.45□□□□□ -1.38
PRPF8-208ENST00000573716 RPL37P61927 97 aaKnown RBP6.45□□□□□ -1.38
PRPF8-208ENST00000573716 HERV-K104P63124 156 aa6.45□□□□□ -1.38
PRPF8-208ENST00000573716 H7C2G1 150 aa6.44□□□□□ -1.38
PRPF8-208ENST00000573716 TRAV23DV6A0A075B6W5 121 aa6.43□□□□□ -1.38
PRPF8-208ENST00000573716 TRBV10-2A0A0K0K1G8 114 aa6.43□□□□□ -1.38
PRPF8-208ENST00000573716 KRTAP4-12Q9BQ66 201 aa6.43□□□□□ -1.38
PRPF8-208ENST00000573716 VPS25Q9BRG1 176 aa6.43□□□□□ -1.38
PRPF8-208ENST00000573716 UQCR10Q9UDW1 63 aa6.43□□□□□ -1.38
PRPF8-208ENST00000573716 MYMXA0A1B0GTQ4 84 aa6.42□□□□□ -1.38
PRPF8-208ENST00000573716 SCGB1D1O95968 90 aa6.42□□□□□ -1.38
PRPF8-208ENST00000573716 CFC1P0CG37 223 aa6.42□□□□□ -1.38
PRPF8-208ENST00000573716 URB1-AS1Q96HZ7 61 aa6.42□□□□□ -1.38
PRPF8-208ENST00000573716 SPANXB1Q9NS25 103 aaPredicted RBP6.42□□□□□ -1.38
PRPF8-208ENST00000573716 A0A1B0GV72 72 aa6.41□□□□□ -1.38
PRPF8-208ENST00000573716 SLC25A34Q6PIV7 304 aa6.41□□□□□ -1.38
PRPF8-208ENST00000573716 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
PRPF8-208ENST00000573716 VAMP8Q9BV40 100 aa6.41□□□□□ -1.38
PRPF8-208ENST00000573716 LAMTOR3Q9UHA4 124 aa6.41□□□□□ -1.38
PRPF8-208ENST00000573716 ZNF73O43830 326 aaPredicted RBP6.4□□□□□ -1.38
PRPF8-208ENST00000573716 COX19Q49B96 90 aa6.4□□□□□ -1.38
PRPF8-208ENST00000573716 OCIAD2Q56VL3 154 aa6.4□□□□□ -1.38
PRPF8-208ENST00000573716 C18orf32Q8TCD1 76 aa6.39□□□□□ -1.39
PRPF8-208ENST00000573716 H0Y8G0 127 aa6.38□□□□□ -1.39
PRPF8-208ENST00000573716 HINT1P49773 126 aaPredicted RBP6.38□□□□□ -1.39
PRPF8-208ENST00000573716 Q1RN00 199 aa6.38□□□□□ -1.39
PRPF8-208ENST00000573716 C1orf195Q5TG92 126 aa6.38□□□□□ -1.39
PRPF8-208ENST00000573716 SSPOA2VEC9 5147 aa6.37□□□□□ -1.39
PRPF8-208ENST00000573716 NPC2P61916 151 aa6.37□□□□□ -1.39
PRPF8-208ENST00000573716 USH2AO75445 5202 aa6.36□□□□□ -1.39
PRPF8-208ENST00000573716 TRAV12-1A0A0B4J245 112 aa6.36□□□□□ -1.39
PRPF8-208ENST00000573716 LOC107984156A0A0G2JMH3 177 aa6.36□□□□□ -1.39
PRPF8-208ENST00000573716 SPRR1BP22528 89 aa6.36□□□□□ -1.39
PRPF8-208ENST00000573716 CD164Q04900 197 aa6.36□□□□□ -1.39
PRPF8-208ENST00000573716 ARL17AQ8IVW1 177 aa6.36□□□□□ -1.39
PRPF8-208ENST00000573716 DEFB105AQ8NG35 78 aa6.36□□□□□ -1.39
PRPF8-208ENST00000573716 IFI27L1Q96BM0 104 aa6.36□□□□□ -1.39
PRPF8-208ENST00000573716 TSPEAR-AS2P59090 65 aa6.35□□□□□ -1.39
PRPF8-208ENST00000573716 FCGBPQ9Y6R7 5405 aaPredicted RBP6.35□□□□□ -1.39
PRPF8-208ENST00000573716 NDUFC2O95298 119 aa6.34□□□□□ -1.39
PRPF8-208ENST00000573716 TAL2Q16559 108 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms