RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 M0R2N4 97 aa8.35□□□□□ -1.07
PCDHGA9-201ENST00000573521 LY6G6CO95867 125 aa8.35□□□□□ -1.07
PCDHGA9-201ENST00000573521 ZNF462Q96JM2 2506 aa8.34□□□□□ -1.07
PCDHGA9-201ENST00000573521 C4orf26Q17RF5 130 aa8.33□□□□□ -1.08
PCDHGA9-201ENST00000573521 OBSCN-AS1Q96MR7 158 aa8.33□□□□□ -1.08
PCDHGA9-201ENST00000573521 FAM229AH3BQW9 127 aa8.32□□□□□ -1.08
PCDHGA9-201ENST00000573521 IGLV1-50A0A075B6I6 118 aa8.31□□□□□ -1.08
PCDHGA9-201ENST00000573521 SMR3AQ99954 134 aa8.3□□□□□ -1.08
PCDHGA9-201ENST00000573521 DMXL2Q8TDJ6 3036 aa8.3□□□□□ -1.08
PCDHGA9-201ENST00000573521 ADGRG4Q8IZF6 3080 aa8.3□□□□□ -1.08
PCDHGA9-201ENST00000573521 EPG5Q9HCE0 2579 aa8.3□□□□□ -1.08
PCDHGA9-201ENST00000573521 DOPEY1Q5JWR5 2465 aa8.29□□□□□ -1.08
PCDHGA9-201ENST00000573521 ABCA12Q86UK0 2595 aa8.29□□□□□ -1.08
PCDHGA9-201ENST00000573521 SPANXA2-OT1Q8N9U9 137 aa8.29□□□□□ -1.08
PCDHGA9-201ENST00000573521 EPM2AB3EWF7 344 aa8.28□□□□□ -1.08
PCDHGA9-201ENST00000573521 DEFB116Q30KQ4 102 aa8.28□□□□□ -1.08
PCDHGA9-201ENST00000573521 ATMQ13315 3056 aa8.28□□□□□ -1.08
PCDHGA9-201ENST00000573521 USP9YO00507 2555 aaPredicted RBP8.27□□□□□ -1.09
PCDHGA9-201ENST00000573521 H7BZZ5 65 aa8.26□□□□□ -1.09
PCDHGA9-201ENST00000573521 ZFYVE26Q68DK2 2539 aa8.26□□□□□ -1.09
PCDHGA9-201ENST00000573521 A0A096LNT2 108 aa8.26□□□□□ -1.09
PCDHGA9-201ENST00000573521 PRR15Q8IV56 129 aa8.26□□□□□ -1.09
PCDHGA9-201ENST00000573521 SPAG11AQ6PDA7 123 aa8.26□□□□□ -1.09
PCDHGA9-201ENST00000573521 MRPL34Q9BQ48 92 aaKnown RBP8.26□□□□□ -1.09
PCDHGA9-201ENST00000573521 LRRK2Q5S007 2527 aa8.25□□□□□ -1.09
PCDHGA9-201ENST00000573521 C19orf73Q9NVV2 129 aa8.25□□□□□ -1.09
PCDHGA9-201ENST00000573521 NBDYA0A0U1RRE5 68 aa8.24□□□□□ -1.09
PCDHGA9-201ENST00000573521 LINC00588Q9Y4M8 146 aa8.24□□□□□ -1.09
PCDHGA9-201ENST00000573521 LINC00313P59037 77 aa8.24□□□□□ -1.09
PCDHGA9-201ENST00000573521 DCHS1Q96JQ0 3298 aa8.24□□□□□ -1.09
PCDHGA9-201ENST00000573521 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
PCDHGA9-201ENST00000573521 FASNP49327 2511 aaKnown RBP8.23□□□□□ -1.09
PCDHGA9-201ENST00000573521 IGLV5-37A0A075B6J1 123 aa8.23□□□□□ -1.09
PCDHGA9-201ENST00000573521 C7orf65Q6ZTY9 151 aa8.23□□□□□ -1.09
PCDHGA9-201ENST00000573521 MDFIQ99750 246 aa8.23□□□□□ -1.09
PCDHGA9-201ENST00000573521 ATP11AUNQ6ZP68 121 aa8.22□□□□□ -1.09
PCDHGA9-201ENST00000573521 FN1P02751 2386 aaKnown RBP8.21□□□□□ -1.1
PCDHGA9-201ENST00000573521 IGLV5-48A0A075B6I7 105 aa8.21□□□□□ -1.1
PCDHGA9-201ENST00000573521 SPENQ96T58 3664 aaKnown RBP8.2□□□□□ -1.1
PCDHGA9-201ENST00000573521 WIPF1O43516 503 aa8.2□□□□□ -1.1
PCDHGA9-201ENST00000573521 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
PCDHGA9-201ENST00000573521 GIG44P09565 113 aaPredicted RBP8.2□□□□□ -1.1
PCDHGA9-201ENST00000573521 K7EQZ3 153 aa8.2□□□□□ -1.1
PCDHGA9-201ENST00000573521 ST20-AS1Q8NBB2 130 aa8.2□□□□□ -1.1
PCDHGA9-201ENST00000573521 Q8N377 158 aa8.2□□□□□ -1.1
PCDHGA9-201ENST00000573521 SMG1Q96Q15 3661 aaKnown RBP8.19□□□□□ -1.1
PCDHGA9-201ENST00000573521 COA5Q86WW8 74 aa8.19□□□□□ -1.1
PCDHGA9-201ENST00000573521 RETNLBQ9BQ08 111 aa8.19□□□□□ -1.1
PCDHGA9-201ENST00000573521 IGKV2D-30A0A075B6S6 120 aa8.18□□□□□ -1.1
PCDHGA9-201ENST00000573521 IGKV2-30P06310 120 aa8.18□□□□□ -1.1
PCDHGA9-201ENST00000573521 C15orf56Q8N910 161 aa8.18□□□□□ -1.1
PCDHGA9-201ENST00000573521 IGFL1Q6UW32 110 aa8.18□□□□□ -1.1
PCDHGA9-201ENST00000573521 PHF5AQ7RTV0 110 aaKnown RBP8.18□□□□□ -1.1
PCDHGA9-201ENST00000573521 TLN2Q9Y4G6 2542 aa8.17□□□□□ -1.1
PCDHGA9-201ENST00000573521 UQCR11O14957 56 aa8.17□□□□□ -1.1
PCDHGA9-201ENST00000573521 C8orf17Q9NRJ1 99 aa8.16□□□□□ -1.1
PCDHGA9-201ENST00000573521 KALRNO60229 2985 aa8.15□□□□□ -1.1
PCDHGA9-201ENST00000573521 SERTAD4-AS1Q5TG53 156 aa8.15□□□□□ -1.1
PCDHGA9-201ENST00000573521 ZNF575Q86XF7 245 aa8.15□□□□□ -1.1
PCDHGA9-201ENST00000573521 RTL8CO15255 209 aa8.15□□□□□ -1.1
PCDHGA9-201ENST00000573521 CD164Q04900 197 aa8.15□□□□□ -1.11
PCDHGA9-201ENST00000573521 A0A1B0GVX0 72 aa8.14□□□□□ -1.11
PCDHGA9-201ENST00000573521 LRBAP50851 2863 aa8.14□□□□□ -1.11
PCDHGA9-201ENST00000573521 TACC2O95359 2948 aa8.14□□□□□ -1.11
PCDHGA9-201ENST00000573521 CNBPP62633 177 aaKnown RBP8.14□□□□□ -1.11
PCDHGA9-201ENST00000573521 SPINK1P00995 79 aa8.13□□□□□ -1.11
PCDHGA9-201ENST00000573521 RELNP78509 3460 aa8.12□□□□□ -1.11
PCDHGA9-201ENST00000573521 C9orf163Q8N9P6 203 aa8.12□□□□□ -1.11
PCDHGA9-201ENST00000573521 A8MUN3 132 aa8.11□□□□□ -1.11
PCDHGA9-201ENST00000573521 C9orf129Q5T035 196 aaKnown RBP8.11□□□□□ -1.11
PCDHGA9-201ENST00000573521 JMJD1CQ15652 2540 aa8.1□□□□□ -1.11
PCDHGA9-201ENST00000573521 SPRR4Q96PI1 79 aa8.1□□□□□ -1.11
PCDHGA9-201ENST00000573521 ZNF861PO60384 105 aa8.09□□□□□ -1.11
PCDHGA9-201ENST00000573521 KRTAP24-1Q3LI83 254 aa8.09□□□□□ -1.11
PCDHGA9-201ENST00000573521 Q1T7F1 81 aa8.09□□□□□ -1.12
PCDHGA9-201ENST00000573521 SPACA4Q8TDM5 124 aa8.08□□□□□ -1.12
PCDHGA9-201ENST00000573521 TYMSOSQ8TAI1 123 aa8.08□□□□□ -1.12
PCDHGA9-201ENST00000573521 OCR1Q9BZK8 76 aa8.08□□□□□ -1.12
PCDHGA9-201ENST00000573521 LINC00336Q6ZUF6 198 aa8.07□□□□□ -1.12
PCDHGA9-201ENST00000573521 A0A1W2PNM2 257 aa8.07□□□□□ -1.12
PCDHGA9-201ENST00000573521 KTN1-AS1Q86SY8 53 aa8.06□□□□□ -1.12
PCDHGA9-201ENST00000573521 ZZEF1O43149 2961 aa8.04□□□□□ -1.12
PCDHGA9-201ENST00000573521 ANKRD17O75179 2603 aaKnown RBP8.03□□□□□ -1.12
PCDHGA9-201ENST00000573521 FAM168BA1KXE4 195 aa8.03□□□□□ -1.12
PCDHGA9-201ENST00000573521 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.12
PCDHGA9-201ENST00000573521 FAM104AQ969W3 186 aa8.02□□□□□ -1.13
PCDHGA9-201ENST00000573521 LCA10Q71F78 164 aa8.02□□□□□ -1.13
PCDHGA9-201ENST00000573521 SETD2Q9BYW2 2564 aaPredicted RBP8.01□□□□□ -1.13
PCDHGA9-201ENST00000573521 MIR22HGQ0VDD5 57 aa8.01□□□□□ -1.13
PCDHGA9-201ENST00000573521 MAP1AP78559 2803 aaPredicted RBP8□□□□□ -1.13
PCDHGA9-201ENST00000573521 CHTF8P0CG12 524 aa7.98□□□□□ -1.13
PCDHGA9-201ENST00000573521 BSNQ9UPA5 3926 aa7.98□□□□□ -1.13
PCDHGA9-201ENST00000573521 POLQO75417 2590 aa7.98□□□□□ -1.13
PCDHGA9-201ENST00000573521 MTORP42345 2549 aa7.97□□□□□ -1.13
PCDHGA9-201ENST00000573521 Q96NJ1 140 aa7.97□□□□□ -1.13
PCDHGA9-201ENST00000573521 DCHS2Q6V1P9 2916 aa7.97□□□□□ -1.13
PCDHGA9-201ENST00000573521 WWC2-AS2Q96NR7 200 aa7.96□□□□□ -1.13
PCDHGA9-201ENST00000573521 ASH1LQ9NR48 2969 aaKnown RBP7.96□□□□□ -1.13
PCDHGA9-201ENST00000573521 CSMD1Q96PZ7 3565 aa7.96□□□□□ -1.14
PCDHGA9-201ENST00000573521 IGLV7-46A0A075B6I9 117 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms