RNA–Protein interactions for RNA: ENST00000573395.1

RAB40B-208, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-208ENST00000573395 MOBPQ13875 183 aa9.31□□□□□ -0.92
RAB40B-208ENST00000573395 FP248Q71RG6 208 aaPredicted RBP9.31□□□□□ -0.92
RAB40B-208ENST00000573395 HIST1H2BKO60814 126 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 HIST1H2BJP06899 126 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 HIST1H2BOP23527 126 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 HIST1H2BBP33778 126 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 HINT1P49773 126 aaPredicted RBP9.3□□□□□ -0.92
RAB40B-208ENST00000573395 HIST1H2BDP58876 126 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 HIST1H2BCP62807 126 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 HIST2H2BEQ16778 126 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.3□□□□□ -0.92
RAB40B-208ENST00000573395 ADAMTSL4-AS1Q5T5F5 129 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 HIST1H2BHQ93079 126 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 HIST1H2BNQ99877 126 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 HIST1H2BMQ99879 126 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 Q9BRP9 147 aa9.3□□□□□ -0.92
RAB40B-208ENST00000573395 ZNF73O43830 326 aaPredicted RBP9.29□□□□□ -0.92
RAB40B-208ENST00000573395 SOSTDC1Q6X4U4 206 aa9.29□□□□□ -0.92
RAB40B-208ENST00000573395 SSBP3-AS1Q7Z2R9 100 aa9.28□□□□□ -0.92
RAB40B-208ENST00000573395 OR13C6PQ8NH95 151 aa9.28□□□□□ -0.92
RAB40B-208ENST00000573395 LINC01545Q5VT33 79 aa9.27□□□□□ -0.93
RAB40B-208ENST00000573395 PET117Q6UWS5 81 aa9.27□□□□□ -0.93
RAB40B-208ENST00000573395 ZNF815PA8K554 130 aa9.26□□□□□ -0.93
RAB40B-208ENST00000573395 EIF4EBP3O60516 100 aaPredicted RBP9.26□□□□□ -0.93
RAB40B-208ENST00000573395 C9orf153Q5TBE3 101 aa9.26□□□□□ -0.93
RAB40B-208ENST00000573395 SPANXCQ9NY87 97 aa9.26□□□□□ -0.93
RAB40B-208ENST00000573395 LINC00308Q8TCZ7 52 aa9.25□□□□□ -0.93
RAB40B-208ENST00000573395 TIMM17BO60830 172 aa9.24□□□□□ -0.93
RAB40B-208ENST00000573395 KRTDAPP60985 99 aa9.22□□□□□ -0.93
RAB40B-208ENST00000573395 LITAFQ99732 161 aa9.22□□□□□ -0.93
RAB40B-208ENST00000573395 C3orf79P0CE67 100 aa9.21□□□□□ -0.94
RAB40B-208ENST00000573395 RPS29P62273 56 aaKnown RBP9.21□□□□□ -0.94
RAB40B-208ENST00000573395 ST20-AS1Q8NBB2 130 aa9.21□□□□□ -0.94
RAB40B-208ENST00000573395 SPANXDQ9BXN6 97 aa9.21□□□□□ -0.94
RAB40B-208ENST00000573395 C20orf202A1L168 122 aa9.2□□□□□ -0.94
RAB40B-208ENST00000573395 C5orf52A6NGY3 159 aa9.2□□□□□ -0.94
RAB40B-208ENST00000573395 SLC25A20O43772 301 aa9.2□□□□□ -0.94
RAB40B-208ENST00000573395 LORP23490 312 aaPredicted RBP9.2□□□□□ -0.94
RAB40B-208ENST00000573395 SCGB1D4Q6XE38 83 aa9.2□□□□□ -0.94
RAB40B-208ENST00000573395 KRTAP13-3Q3SY46 172 aa9.19□□□□□ -0.94
RAB40B-208ENST00000573395 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
RAB40B-208ENST00000573395 LINC00518Q8N0U6 118 aa9.19□□□□□ -0.94
RAB40B-208ENST00000573395 TTTY13Q9BZ97 58 aa9.19□□□□□ -0.94
RAB40B-208ENST00000573395 DHRS4-AS1Q9P1J3 65 aa9.19□□□□□ -0.94
RAB40B-208ENST00000573395 Q8N377 158 aa9.18□□□□□ -0.94
RAB40B-208ENST00000573395 MUC2Q02817 5179 aa9.17□□□□□ -0.94
RAB40B-208ENST00000573395 COX7BP24311 80 aa9.16□□□□□ -0.94
RAB40B-208ENST00000573395 COPS9Q8WXC6 57 aa9.16□□□□□ -0.94
RAB40B-208ENST00000573395 COA6Q5JTJ3 125 aaKnown RBP9.15□□□□□ -0.94
RAB40B-208ENST00000573395 C6orf99Q4VX62 202 aa9.14□□□□□ -0.95
RAB40B-208ENST00000573395 LAMTOR3Q9UHA4 124 aa9.14□□□□□ -0.95
RAB40B-208ENST00000573395 A6NJY4 79 aa9.12□□□□□ -0.95
RAB40B-208ENST00000573395 ELOF1P60002 83 aaKnown RBP9.12□□□□□ -0.95
RAB40B-208ENST00000573395 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
RAB40B-208ENST00000573395 TAL2Q16559 108 aa9.12□□□□□ -0.95
RAB40B-208ENST00000573395 ATOH7Q8N100 152 aa9.12□□□□□ -0.95
RAB40B-208ENST00000573395 A6NDN8 102 aa9.11□□□□□ -0.95
RAB40B-208ENST00000573395 IFITM1P13164 125 aa9.11□□□□□ -0.95
RAB40B-208ENST00000573395 SPRR1BP22528 89 aa9.11□□□□□ -0.95
RAB40B-208ENST00000573395 AKR1D1P51857 326 aa9.11□□□□□ -0.95
RAB40B-208ENST00000573395 DEFB105AQ8NG35 78 aa9.11□□□□□ -0.95
RAB40B-208ENST00000573395 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
RAB40B-208ENST00000573395 ASB16-AS1Q495Z4 193 aa9.1□□□□□ -0.95
RAB40B-208ENST00000573395 ANKRD39Q53RE8 183 aa9.1□□□□□ -0.95
RAB40B-208ENST00000573395 HRCT1Q6UXD1 115 aa9.1□□□□□ -0.95
RAB40B-208ENST00000573395 Q6ZVH6 145 aa9.09□□□□□ -0.95
RAB40B-208ENST00000573395 TRBV7-6A0A0J9YX20 115 aa9.07□□□□□ -0.96
RAB40B-208ENST00000573395 A0A1B0GWB2 263 aa9.07□□□□□ -0.96
RAB40B-208ENST00000573395 Q1RN00 199 aa9.07□□□□□ -0.96
RAB40B-208ENST00000573395 TEX49A0A1B0GTD5 131 aa9.06□□□□□ -0.96
RAB40B-208ENST00000573395 MUSTN1Q8IVN3 82 aa9.06□□□□□ -0.96
RAB40B-208ENST00000573395 PCP2Q8IVA1 136 aa9.05□□□□□ -0.96
RAB40B-208ENST00000573395 PRO1933Q9H354 126 aa9.05□□□□□ -0.96
RAB40B-208ENST00000573395 SNRPEP62304 92 aaKnown RBP9.04□□□□□ -0.96
RAB40B-208ENST00000573395 TRAV13-2A0A0B4J235 113 aa9.03□□□□□ -0.96
RAB40B-208ENST00000573395 S100A2P29034 98 aa9.03□□□□□ -0.96
RAB40B-208ENST00000573395 A4D1N5 150 aa9.02□□□□□ -0.97
RAB40B-208ENST00000573395 NHP2Q9NX24 153 aaKnown RBP9.02□□□□□ -0.97
RAB40B-208ENST00000573395 HSBP1L1C9JCN9 74 aa9.01□□□□□ -0.97
RAB40B-208ENST00000573395 H7C2G1 150 aa9.01□□□□□ -0.97
RAB40B-208ENST00000573395 XP32Q5T750 250 aa9.01□□□□□ -0.97
RAB40B-208ENST00000573395 CD164Q04900 197 aa9□□□□□ -0.97
RAB40B-208ENST00000573395 MUC17Q685J3 4493 aa9□□□□□ -0.97
RAB40B-208ENST00000573395 LINC01547P58512 204 aaPredicted RBP8.99□□□□□ -0.97
RAB40B-208ENST00000573395 SMIM11BQ8TCY0 68 aa8.98□□□□□ -0.97
RAB40B-208ENST00000573395 VAMP3Q15836 100 aa8.97□□□□□ -0.97
RAB40B-208ENST00000573395 IGLV5-48A0A075B6I7 105 aa8.96□□□□□ -0.98
RAB40B-208ENST00000573395 C9orf92A6NGG3 77 aa8.96□□□□□ -0.98
RAB40B-208ENST00000573395 HIST3H2BBQ8N257 126 aa8.96□□□□□ -0.98
RAB40B-208ENST00000573395 S100A6P06703 90 aa8.95□□□□□ -0.98
RAB40B-208ENST00000573395 SMIM29Q86T20 159 aa8.95□□□□□ -0.98
RAB40B-208ENST00000573395 HIST1H2BLQ99880 126 aa8.95□□□□□ -0.98
RAB40B-208ENST00000573395 KRTAP9-2Q9BYQ4 174 aa8.95□□□□□ -0.98
RAB40B-208ENST00000573395 KRTAP4-1Q9BYQ7 146 aa8.95□□□□□ -0.98
RAB40B-208ENST00000573395 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
RAB40B-208ENST00000573395 F8WEM9 126 aa8.94□□□□□ -0.98
RAB40B-208ENST00000573395 A0A0G2JQZ4 141 aa8.91□□□□□ -0.98
RAB40B-208ENST00000573395 Q5XG85 94 aa8.9□□□□□ -0.98
RAB40B-208ENST00000573395 S100A1P23297 94 aa8.89□□□□□ -0.99
RAB40B-208ENST00000573395 SCGB1D1O95968 90 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms