RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 A0A087WTM6 91 aa6.35□□□□□ -1.39
USP6-204ENST00000572949 TRBV7-4A0A0J9YYF1 115 aa6.35□□□□□ -1.39
USP6-204ENST00000572949 Q6ZQT0 140 aa6.35□□□□□ -1.39
USP6-204ENST00000572949 COL4A2P08572 1712 aa6.35□□□□□ -1.39
USP6-204ENST00000572949 UQCR11O14957 56 aa6.35□□□□□ -1.39
USP6-204ENST00000572949 ATRQ13535 2644 aa6.34□□□□□ -1.39
USP6-204ENST00000572949 URB1-AS1Q96HZ7 61 aa6.34□□□□□ -1.39
USP6-204ENST00000572949 A0A0D9SG42 100 aa6.33□□□□□ -1.4
USP6-204ENST00000572949 KRTAP10-11P60412 298 aa6.33□□□□□ -1.4
USP6-204ENST00000572949 MGAM2Q2M2H8 2515 aa6.33□□□□□ -1.4
USP6-204ENST00000572949 PRO0628Q9UI54 55 aa6.32□□□□□ -1.4
USP6-204ENST00000572949 ZNF575Q86XF7 245 aa6.32□□□□□ -1.4
USP6-204ENST00000572949 UTRNP46939 3433 aa6.32□□□□□ -1.4
USP6-204ENST00000572949 LINC01546A6NGU7 62 aa6.31□□□□□ -1.4
USP6-204ENST00000572949 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
USP6-204ENST00000572949 LOC110117498A0A087WWA1 95 aa6.31□□□□□ -1.4
USP6-204ENST00000572949 VPREB1P12018 145 aa6.3□□□□□ -1.4
USP6-204ENST00000572949 LUZP6Q538Z0 58 aa6.3□□□□□ -1.4
USP6-204ENST00000572949 IGLV5-48A0A075B6I7 105 aa6.3□□□□□ -1.4
USP6-204ENST00000572949 IGLV7-43P04211 117 aa6.29□□□□□ -1.4
USP6-204ENST00000572949 CR1P17927 2039 aa6.29□□□□□ -1.4
USP6-204ENST00000572949 IGLV1-50A0A075B6I6 118 aa6.28□□□□□ -1.4
USP6-204ENST00000572949 A0A1B0GVX0 72 aa6.28□□□□□ -1.4
USP6-204ENST00000572949 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
USP6-204ENST00000572949 COA5Q86WW8 74 aa6.28□□□□□ -1.4
USP6-204ENST00000572949 C9orf163Q8N9P6 203 aa6.28□□□□□ -1.4
USP6-204ENST00000572949 ANAPC11Q9NYG5 84 aa6.28□□□□□ -1.4
USP6-204ENST00000572949 C8orf17Q9NRJ1 99 aa6.27□□□□□ -1.41
USP6-204ENST00000572949 IGLV5-45A0A087WSX0 123 aa6.27□□□□□ -1.41
USP6-204ENST00000572949 LINC00483Q53H64 154 aa6.27□□□□□ -1.41
USP6-204ENST00000572949 CFAP46Q8IYW2 2715 aa6.26□□□□□ -1.41
USP6-204ENST00000572949 IGLV7-46A0A075B6I9 117 aa6.26□□□□□ -1.41
USP6-204ENST00000572949 A0A096LNJ9 63 aa6.26□□□□□ -1.41
USP6-204ENST00000572949 FAM218AQ96MZ4 157 aa6.26□□□□□ -1.41
USP6-204ENST00000572949 IGFL1Q6UW32 110 aa6.25□□□□□ -1.41
USP6-204ENST00000572949 CDC42SE1Q9NRR8 79 aa6.25□□□□□ -1.41
USP6-204ENST00000572949 PSORS1C2Q9UIG4 136 aa6.25□□□□□ -1.41
USP6-204ENST00000572949 CENPEQ02224 2701 aa6.24□□□□□ -1.41
USP6-204ENST00000572949 PCNTO95613 3336 aa6.24□□□□□ -1.41
USP6-204ENST00000572949 C5orf42Q9H799 3197 aa6.24□□□□□ -1.41
USP6-204ENST00000572949 KCNQ1DNQ9H478 68 aa6.23□□□□□ -1.41
USP6-204ENST00000572949 C15orf56Q8N910 161 aa6.23□□□□□ -1.41
USP6-204ENST00000572949 C19orf73Q9NVV2 129 aa6.23□□□□□ -1.41
USP6-204ENST00000572949 PRR15Q8IV56 129 aa6.22□□□□□ -1.41
USP6-204ENST00000572949 Q8N1X5 172 aa6.22□□□□□ -1.41
USP6-204ENST00000572949 PRO0461Q9UI25 63 aa6.22□□□□□ -1.41
USP6-204ENST00000572949 HELZ2Q9BYK8 2649 aaKnown RBP6.19□□□□□ -1.42
USP6-204ENST00000572949 HRES1P13985 223 aa6.18□□□□□ -1.42
USP6-204ENST00000572949 CYP4F30PQ9H0H9 118 aa6.18□□□□□ -1.42
USP6-204ENST00000572949 FAM104AQ969W3 186 aa6.17□□□□□ -1.42
USP6-204ENST00000572949 CASC10Q5T4H9 136 aa6.17□□□□□ -1.42
USP6-204ENST00000572949 C4orf26Q17RF5 130 aa6.17□□□□□ -1.42
USP6-204ENST00000572949 C10orf142B7Z368 130 aa6.16□□□□□ -1.42
USP6-204ENST00000572949 ITPR3Q14573 2671 aa6.16□□□□□ -1.42
USP6-204ENST00000572949 SPRR4Q96PI1 79 aa6.16□□□□□ -1.42
USP6-204ENST00000572949 FLNAP21333 2647 aaKnown RBP6.16□□□□□ -1.42
USP6-204ENST00000572949 LINC00612Q8N6U2 182 aa6.15□□□□□ -1.43
USP6-204ENST00000572949 SMCPP49901 116 aaPredicted RBP6.15□□□□□ -1.43
USP6-204ENST00000572949 TNP2Q05952 138 aa6.15□□□□□ -1.43
USP6-204ENST00000572949 A0A1W2PNN7 141 aa6.14□□□□□ -1.43
USP6-204ENST00000572949 A0A0G2JQZ4 141 aa6.14□□□□□ -1.43
USP6-204ENST00000572949 A8MUN3 132 aa6.14□□□□□ -1.43
USP6-204ENST00000572949 Q8N377 158 aa6.13□□□□□ -1.43
USP6-204ENST00000572949 PLA2G2DQ9UNK4 145 aa6.13□□□□□ -1.43
USP6-204ENST00000572949 STAB1Q9NY15 2570 aa6.13□□□□□ -1.43
USP6-204ENST00000572949 TLX1NBP0CAT3 122 aa6.12□□□□□ -1.43
USP6-204ENST00000572949 PRR34Q9NV39 138 aa6.12□□□□□ -1.43
USP6-204ENST00000572949 PRR26Q8N8Z3 221 aa6.12□□□□□ -1.43
USP6-204ENST00000572949 KRTAP10-3P60369 221 aa6.12□□□□□ -1.43
USP6-204ENST00000572949 TEX15Q9BXT5 2789 aa6.11□□□□□ -1.43
USP6-204ENST00000572949 CNBPP62633 177 aaKnown RBP6.11□□□□□ -1.43
USP6-204ENST00000572949 ERC2-IT1O76042 136 aa6.11□□□□□ -1.43
USP6-204ENST00000572949 CFAP54Q96N23 3096 aa6.1□□□□□ -1.43
USP6-204ENST00000572949 SEC61BP60468 96 aaKnown RBP6.1□□□□□ -1.43
USP6-204ENST00000572949 LAMA2P24043 3122 aaKnown RBP6.09□□□□□ -1.43
USP6-204ENST00000572949 CHD6Q8TD26 2715 aa6.09□□□□□ -1.44
USP6-204ENST00000572949 CSAG1Q6PB30 78 aa6.09□□□□□ -1.44
USP6-204ENST00000572949 DMBT1Q9UGM3 2413 aaPredicted RBP6.08□□□□□ -1.44
USP6-204ENST00000572949 S4R3F8 94 aa6.07□□□□□ -1.44
USP6-204ENST00000572949 BAHCC1Q9P281 2608 aa6.05□□□□□ -1.44
USP6-204ENST00000572949 CD164Q04900 197 aa6.05□□□□□ -1.44
USP6-204ENST00000572949 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
USP6-204ENST00000572949 Q1T7F1 81 aa6.03□□□□□ -1.44
USP6-204ENST00000572949 R4GN34 69 aa6.03□□□□□ -1.44
USP6-204ENST00000572949 NBEAL1Q6ZS30 2694 aa6.03□□□□□ -1.44
USP6-204ENST00000572949 Q5VSD8 79 aa6.03□□□□□ -1.44
USP6-204ENST00000572949 SETXQ7Z333 2677 aaKnown RBP6.02□□□□□ -1.45
USP6-204ENST00000572949 KLKP1Q107X0 134 aa6.01□□□□□ -1.45
USP6-204ENST00000572949 UNC79Q9P2D8 2635 aa6.01□□□□□ -1.45
USP6-204ENST00000572949 A0A1B0GU33 70 aa6.01□□□□□ -1.45
USP6-204ENST00000572949 WIPF1O43516 503 aa6□□□□□ -1.45
USP6-204ENST00000572949 LITAFQ99732 161 aa5.99□□□□□ -1.45
USP6-204ENST00000572949 GIG44P09565 113 aaPredicted RBP5.99□□□□□ -1.45
USP6-204ENST00000572949 FAM229BQ4G0N7 80 aa5.99□□□□□ -1.45
USP6-204ENST00000572949 MAP1AP78559 2803 aaPredicted RBP5.98□□□□□ -1.45
USP6-204ENST00000572949 A0A0C4DFX4 3053 aa5.98□□□□□ -1.45
USP6-204ENST00000572949 TEP1Q99973 2627 aaKnown RBP5.97□□□□□ -1.45
USP6-204ENST00000572949 COL6A5A8TX70 2615 aa5.97□□□□□ -1.45
USP6-204ENST00000572949 KLK9Q2XQG4 91 aa5.97□□□□□ -1.45
USP6-204ENST00000572949 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms