RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 APLNQ9ULZ1 77 aa10.53□□□□□ -0.72
POLR2A-201ENST00000572844 DNAH1Q9P2D7 4330 aa10.52□□□□□ -0.73
POLR2A-201ENST00000572844 IGLV1-50A0A075B6I6 118 aa10.51□□□□□ -0.73
POLR2A-201ENST00000572844 SPRR1AP35321 89 aa10.51□□□□□ -0.73
POLR2A-201ENST00000572844 KRTAP4-16G5E9R7 235 aaPredicted RBP10.5□□□□□ -0.73
POLR2A-201ENST00000572844 ATOX1O00244 68 aa10.49□□□□□ -0.73
POLR2A-201ENST00000572844 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
POLR2A-201ENST00000572844 KRTAP7-1Q8IUC3 87 aa10.49□□□□□ -0.73
POLR2A-201ENST00000572844 FAM168BA1KXE4 195 aa10.48□□□□□ -0.73
POLR2A-201ENST00000572844 KRTAP1-5Q9BYS1 174 aa10.48□□□□□ -0.73
POLR2A-201ENST00000572844 Q6ZRX8 168 aa10.48□□□□□ -0.73
POLR2A-201ENST00000572844 B5MCH6 92 aa10.47□□□□□ -0.73
POLR2A-201ENST00000572844 CNBPP62633 177 aaKnown RBP10.47□□□□□ -0.73
POLR2A-201ENST00000572844 M0R2N4 97 aa10.46□□□□□ -0.73
POLR2A-201ENST00000572844 UBE2DNLQ8IWF7 75 aa10.46□□□□□ -0.73
POLR2A-201ENST00000572844 MRPL55Q7Z7F7 128 aaKnown RBP10.46□□□□□ -0.74
POLR2A-201ENST00000572844 ETDCA0A1B0GVM5 59 aa10.44□□□□□ -0.74
POLR2A-201ENST00000572844 RPL37AP8A6NKH3 93 aa10.44□□□□□ -0.74
POLR2A-201ENST00000572844 UQCRQO14949 82 aa10.44□□□□□ -0.74
POLR2A-201ENST00000572844 Q6ZVQ6 151 aa10.44□□□□□ -0.74
POLR2A-201ENST00000572844 C14orf177Q52M58 125 aa10.43□□□□□ -0.74
POLR2A-201ENST00000572844 C3orf22Q8N5N4 141 aa10.43□□□□□ -0.74
POLR2A-201ENST00000572844 A0A087WVE0 104 aa10.42□□□□□ -0.74
POLR2A-201ENST00000572844 LINC01547P58512 204 aaPredicted RBP10.42□□□□□ -0.74
POLR2A-201ENST00000572844 FAM19A5Q7Z5A7 132 aaPredicted RBP10.42□□□□□ -0.74
POLR2A-201ENST00000572844 Q8N377 158 aa10.42□□□□□ -0.74
POLR2A-201ENST00000572844 C16orf90A8MZG2 172 aa10.42□□□□□ -0.74
POLR2A-201ENST00000572844 PSCAO43653 123 aa10.42□□□□□ -0.74
POLR2A-201ENST00000572844 COX7CP15954 63 aa10.42□□□□□ -0.74
POLR2A-201ENST00000572844 Q9BRP9 147 aa10.42□□□□□ -0.74
POLR2A-201ENST00000572844 DNAH9Q9NYC9 4486 aa10.41□□□□□ -0.74
POLR2A-201ENST00000572844 CXCL6P80162 114 aa10.41□□□□□ -0.74
POLR2A-201ENST00000572844 IGLV5-48A0A075B6I7 105 aa10.4□□□□□ -0.74
POLR2A-201ENST00000572844 DNHD1Q96M86 4753 aa10.4□□□□□ -0.75
POLR2A-201ENST00000572844 NUPR2A6NF83 97 aa10.4□□□□□ -0.75
POLR2A-201ENST00000572844 DYNC2H1Q8NCM8 4307 aaKnown RBP10.4□□□□□ -0.75
POLR2A-201ENST00000572844 A0A096LNI7 61 aa10.38□□□□□ -0.75
POLR2A-201ENST00000572844 REG3GQ6UW15 175 aa10.38□□□□□ -0.75
POLR2A-201ENST00000572844 FAM19A1Q7Z5A9 133 aa10.38□□□□□ -0.75
POLR2A-201ENST00000572844 STAB2Q8WWQ8 2551 aa10.37□□□□□ -0.75
POLR2A-201ENST00000572844 SERP2Q8N6R1 65 aa10.37□□□□□ -0.75
POLR2A-201ENST00000572844 COL7A1Q02388 2944 aa10.36□□□□□ -0.75
POLR2A-201ENST00000572844 A0A1B0GW54 56 aa10.36□□□□□ -0.75
POLR2A-201ENST00000572844 HAMPP81172 84 aa10.36□□□□□ -0.75
POLR2A-201ENST00000572844 DEFB105AQ8NG35 78 aa10.36□□□□□ -0.75
POLR2A-201ENST00000572844 BCE1O60756 84 aa10.35□□□□□ -0.75
POLR2A-201ENST00000572844 PKIGQ9Y2B9 76 aa10.35□□□□□ -0.75
POLR2A-201ENST00000572844 TNP2Q05952 138 aa10.35□□□□□ -0.75
POLR2A-201ENST00000572844 C9orf153Q5TBE3 101 aa10.35□□□□□ -0.75
POLR2A-201ENST00000572844 NBDYA0A0U1RRE5 68 aa10.34□□□□□ -0.75
POLR2A-201ENST00000572844 CRYGAP11844 174 aa10.34□□□□□ -0.75
POLR2A-201ENST00000572844 SS18L2Q9UHA2 77 aa10.33□□□□□ -0.76
POLR2A-201ENST00000572844 A0A1W2PNN7 141 aa10.32□□□□□ -0.76
POLR2A-201ENST00000572844 LRCOL1A6NCL2 159 aa10.32□□□□□ -0.76
POLR2A-201ENST00000572844 UBE2BP63146 152 aa10.32□□□□□ -0.76
POLR2A-201ENST00000572844 ST20-AS1Q8NBB2 130 aa10.31□□□□□ -0.76
POLR2A-201ENST00000572844 IGKV2-24A0A0C4DH68 120 aa10.3□□□□□ -0.76
POLR2A-201ENST00000572844 ERC2-IT1O76042 136 aa10.3□□□□□ -0.76
POLR2A-201ENST00000572844 C9orf163Q8N9P6 203 aa10.3□□□□□ -0.76
POLR2A-201ENST00000572844 Q6ZRN7 208 aaPredicted RBP10.29□□□□□ -0.76
POLR2A-201ENST00000572844 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.28□□□□□ -0.76
POLR2A-201ENST00000572844 FUSP35637 526 aaKnown RBP eCLIP10.27□□□□□ -0.76
POLR2A-201ENST00000572844 NREPQ16612 68 aa10.27□□□□□ -0.77
POLR2A-201ENST00000572844 C1orf137Q5JT78 98 aa10.26□□□□□ -0.77
POLR2A-201ENST00000572844 SMIM20Q8N5G0 67 aa10.26□□□□□ -0.77
POLR2A-201ENST00000572844 SMIM29Q86T20 159 aa10.25□□□□□ -0.77
POLR2A-201ENST00000572844 LINC00474Q9P2X8 69 aa10.25□□□□□ -0.77
POLR2A-201ENST00000572844 PRKDCP78527 4128 aaKnown RBP10.25□□□□□ -0.77
POLR2A-201ENST00000572844 A0A1W2PNM2 257 aa10.24□□□□□ -0.77
POLR2A-201ENST00000572844 H0Y9J4 135 aa10.24□□□□□ -0.77
POLR2A-201ENST00000572844 Q8NBF4 154 aa10.24□□□□□ -0.77
POLR2A-201ENST00000572844 SPRR4Q96PI1 79 aa10.24□□□□□ -0.77
POLR2A-201ENST00000572844 DNAH10Q8IVF4 4471 aa10.22□□□□□ -0.77
POLR2A-201ENST00000572844 TRAV7A0A075B6U4 112 aa10.21□□□□□ -0.77
POLR2A-201ENST00000572844 C3orf84H3BNL1 204 aa10.21□□□□□ -0.77
POLR2A-201ENST00000572844 CHTF8P0CG12 524 aa10.21□□□□□ -0.77
POLR2A-201ENST00000572844 SCXQ7RTU7 201 aa10.21□□□□□ -0.77
POLR2A-201ENST00000572844 PHF5AQ7RTV0 110 aaKnown RBP10.21□□□□□ -0.78
POLR2A-201ENST00000572844 IGLV8-61A0A075B6I0 122 aa10.2□□□□□ -0.78
POLR2A-201ENST00000572844 F8WEM9 126 aa10.2□□□□□ -0.78
POLR2A-201ENST00000572844 PRLHP81277 87 aa10.2□□□□□ -0.78
POLR2A-201ENST00000572844 KRTAP21-3Q3LHN1 58 aa10.2□□□□□ -0.78
POLR2A-201ENST00000572844 BPY2O14599 106 aa10.19□□□□□ -0.78
POLR2A-201ENST00000572844 PLECQ15149 4684 aaKnown RBP10.19□□□□□ -0.78
POLR2A-201ENST00000572844 CSMD3Q7Z407 3707 aa10.19□□□□□ -0.78
POLR2A-201ENST00000572844 LYSTQ99698 3801 aa10.18□□□□□ -0.78
POLR2A-201ENST00000572844 MEGF8Q7Z7M0 2845 aa10.18□□□□□ -0.78
POLR2A-201ENST00000572844 IGKV4-1P06312 121 aa10.18□□□□□ -0.78
POLR2A-201ENST00000572844 KRTAP11-1Q8IUC1 163 aa10.18□□□□□ -0.78
POLR2A-201ENST00000572844 EPM2AB3EWF7 344 aa10.17□□□□□ -0.78
POLR2A-201ENST00000572844 SPRR1BP22528 89 aa10.17□□□□□ -0.78
POLR2A-201ENST00000572844 LINC00476Q8WZB0 136 aa10.17□□□□□ -0.78
POLR2A-201ENST00000572844 HIGD2AQ9BW72 106 aa10.16□□□□□ -0.78
POLR2A-201ENST00000572844 CYSTM1Q9H1C7 97 aa10.14□□□□□ -0.79
POLR2A-201ENST00000572844 DNAH7Q8WXX0 4024 aa10.14□□□□□ -0.79
POLR2A-201ENST00000572844 TMEM258P61165 79 aa10.13□□□□□ -0.79
POLR2A-201ENST00000572844 A0A087WTM6 91 aa10.13□□□□□ -0.79
POLR2A-201ENST00000572844 IGFL1Q6UW32 110 aa10.13□□□□□ -0.79
POLR2A-201ENST00000572844 Q6ZR54 194 aa10.12□□□□□ -0.79
POLR2A-201ENST00000572844 SPACA4Q8TDM5 124 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms