RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CNFNQ9BYD5 112 aa2.12□□□□□ -2.07
TOPBP1-210ENST00000572787 TMEM167BQ9NRX6 74 aa2.12□□□□□ -2.07
TOPBP1-210ENST00000572787 ASXL3Q9C0F0 2248 aa2.11□□□□□ -2.07
TOPBP1-210ENST00000572787 C4BP0C0L5 1744 aa2.11□□□□□ -2.07
TOPBP1-210ENST00000572787 MROH2BQ7Z745 1585 aa2.1□□□□□ -2.07
TOPBP1-210ENST00000572787 KRTAP10-10P60014 251 aa2.09□□□□□ -2.07
TOPBP1-210ENST00000572787 NOTCH3Q9UM47 2321 aa2.08□□□□□ -2.08
TOPBP1-210ENST00000572787 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
TOPBP1-210ENST00000572787 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
TOPBP1-210ENST00000572787 URB1O60287 2271 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-210ENST00000572787 LYNX1G3V0Z9 82 aa2.07□□□□□ -2.08
TOPBP1-210ENST00000572787 LMO7Q8WWI1 1683 aa2.06□□□□□ -2.08
TOPBP1-210ENST00000572787 DUOX1Q9NRD9 1551 aa2.06□□□□□ -2.08
TOPBP1-210ENST00000572787 COX6A2Q02221 97 aa2.05□□□□□ -2.08
TOPBP1-210ENST00000572787 PRO3102Q9H379 93 aa2.05□□□□□ -2.08
TOPBP1-210ENST00000572787 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
TOPBP1-210ENST00000572787 KRTAP13-1Q8IUC0 172 aa2.04□□□□□ -2.08
TOPBP1-210ENST00000572787 LINC00308Q8TCZ7 52 aa2.04□□□□□ -2.08
TOPBP1-210ENST00000572787 KNTC1P50748 2209 aa2.03□□□□□ -2.08
TOPBP1-210ENST00000572787 FLG2Q5D862 2391 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-210ENST00000572787 SPINK9Q5DT21 86 aa2.02□□□□□ -2.09
TOPBP1-210ENST00000572787 PRO0255Q9UI72 69 aa2.02□□□□□ -2.09
TOPBP1-210ENST00000572787 AHCTF1Q8WYP5 2266 aa2.01□□□□□ -2.09
TOPBP1-210ENST00000572787 CNTRLQ7Z7A1 2325 aa2.01□□□□□ -2.09
TOPBP1-210ENST00000572787 NOTCH2Q04721 2471 aa2□□□□□ -2.09
TOPBP1-210ENST00000572787 LOC730098B7Z3J9 87 aa2□□□□□ -2.09
TOPBP1-210ENST00000572787 J3QKU1 62 aa2□□□□□ -2.09
TOPBP1-210ENST00000572787 GOLGA4Q13439 2230 aaKnown RBP2□□□□□ -2.09
TOPBP1-210ENST00000572787 CACNA1EQ15878 2313 aa1.99□□□□□ -2.09
TOPBP1-210ENST00000572787 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
TOPBP1-210ENST00000572787 C10orf95Q9H7T3 257 aa1.99□□□□□ -2.09
TOPBP1-210ENST00000572787 ZDBF2Q9HCK1 2354 aa1.99□□□□□ -2.09
TOPBP1-210ENST00000572787 FAM208BQ5VWN6 2430 aa1.98□□□□□ -2.09
TOPBP1-210ENST00000572787 H0YAA0 97 aa1.98□□□□□ -2.09
TOPBP1-210ENST00000572787 MINOS1Q5TGZ0 78 aa1.98□□□□□ -2.09
TOPBP1-210ENST00000572787 SMIM2Q9BVW6 85 aa1.98□□□□□ -2.09
TOPBP1-210ENST00000572787 NAV3Q8IVL0 2385 aa1.96□□□□□ -2.09
TOPBP1-210ENST00000572787 JMJD1CQ15652 2540 aa1.96□□□□□ -2.09
TOPBP1-210ENST00000572787 GCC2Q8IWJ2 1684 aa1.96□□□□□ -2.1
TOPBP1-210ENST00000572787 Q5VSD8 79 aa1.96□□□□□ -2.1
TOPBP1-210ENST00000572787 C6orf48Q9UBA6 75 aa1.96□□□□□ -2.1
TOPBP1-210ENST00000572787 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.95□□□□□ -2.12e-17■■■■■ 64.5
TOPBP1-210ENST00000572787 TFF3Q07654 80 aa1.94□□□□□ -2.1
TOPBP1-210ENST00000572787 BPTFQ12830 3046 aa1.93□□□□□ -2.1
TOPBP1-210ENST00000572787 NDUFA1O15239 70 aa1.93□□□□□ -2.1
TOPBP1-210ENST00000572787 SPRR1AP35321 89 aa1.93□□□□□ -2.1
TOPBP1-210ENST00000572787 CNOT1A5YKK6 2376 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-210ENST00000572787 FBN1P35555 2871 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-210ENST00000572787 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
TOPBP1-210ENST00000572787 APLNQ9ULZ1 77 aa1.91□□□□□ -2.1
TOPBP1-210ENST00000572787 PRB3Q04118 309 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-210ENST00000572787 H1FX-AS1Q4G0G2 97 aa1.9□□□□□ -2.11
TOPBP1-210ENST00000572787 LELP1Q5T871 98 aa1.9□□□□□ -2.11
TOPBP1-210ENST00000572787 Q6ZSA8 131 aa1.9□□□□□ -2.11
TOPBP1-210ENST00000572787 DEFB105AQ8NG35 78 aa1.9□□□□□ -2.11
TOPBP1-210ENST00000572787 IAPPP10997 89 aa1.89□□□□□ -2.11
TOPBP1-210ENST00000572787 WFDC13Q8IUB5 93 aa1.89□□□□□ -2.11
TOPBP1-210ENST00000572787 OTOGLQ3ZCN5 2332 aa1.89□□□□□ -2.11
TOPBP1-210ENST00000572787 CLTCL1P53675 1640 aa1.88□□□□□ -2.11
TOPBP1-210ENST00000572787 LCE3AQ5TA76 89 aa1.88□□□□□ -2.11
TOPBP1-210ENST00000572787 A0A0D9SG42 100 aa1.87□□□□□ -2.11
TOPBP1-210ENST00000572787 PIEZO2Q9H5I5 2752 aa1.87□□□□□ -2.11
TOPBP1-210ENST00000572787 SPRR1BP22528 89 aa1.86□□□□□ -2.11
TOPBP1-210ENST00000572787 RPS27P42677 84 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-210ENST00000572787 RPS27LQ71UM5 84 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-210ENST00000572787 DEFB130BP0DP73 79 aa1.85□□□□□ -2.11
TOPBP1-210ENST00000572787 DEFB130AP0DP74 79 aa1.85□□□□□ -2.11
TOPBP1-210ENST00000572787 KRTAP21-3Q3LHN1 58 aa1.85□□□□□ -2.11
TOPBP1-210ENST00000572787 SORL1Q92673 2214 aa1.81□□□□□ -2.12
TOPBP1-210ENST00000572787 DOPEY2Q9Y3R5 2298 aa1.8□□□□□ -2.12
TOPBP1-210ENST00000572787 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
TOPBP1-210ENST00000572787 COL6A6A6NMZ7 2263 aa1.79□□□□□ -2.12
TOPBP1-210ENST00000572787 WFDC10BQ8IUB3 73 aa1.78□□□□□ -2.12
TOPBP1-210ENST00000572787 RP1L1Q8IWN7 2480 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-210ENST00000572787 PTPRZ1P23471 2315 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-210ENST00000572787 H3BUA1 57 aa1.77□□□□□ -2.13
TOPBP1-210ENST00000572787 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
TOPBP1-210ENST00000572787 WT1-ASQ06250 92 aa1.77□□□□□ -2.13
TOPBP1-210ENST00000572787 PTPRQQ9UMZ3 2332 aa1.77□□□□□ -2.13
TOPBP1-210ENST00000572787 KLK9Q2XQG4 91 aa1.76□□□□□ -2.13
TOPBP1-210ENST00000572787 IGLV5-48A0A075B6I7 105 aa1.75□□□□□ -2.13
TOPBP1-210ENST00000572787 KRTAP10-4P60372 401 aaPredicted RBP1.74□□□□□ -2.13
TOPBP1-210ENST00000572787 TRIOBPQ9H2D6 2365 aa1.73□□□□□ -2.13
TOPBP1-210ENST00000572787 KAAG1Q9UBP8 84 aa1.73□□□□□ -2.13
TOPBP1-210ENST00000572787 DEFB131AP59861 70 aa1.72□□□□□ -2.13
TOPBP1-210ENST00000572787 PLCE1Q9P212 2302 aa1.72□□□□□ -2.13
TOPBP1-210ENST00000572787 USF3Q68DE3 2245 aa1.71□□□□□ -2.14
TOPBP1-210ENST00000572787 ALMS1Q8TCU4 4167 aa1.71□□□□□ -2.14
TOPBP1-210ENST00000572787 ASH1LQ9NR48 2969 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-210ENST00000572787 ROS1P08922 2347 aa1.71□□□□□ -2.14
TOPBP1-210ENST00000572787 WNK2Q9Y3S1 2297 aa1.69□□□□□ -2.14
TOPBP1-210ENST00000572787 ZNF462Q96JM2 2506 aa1.68□□□□□ -2.14
TOPBP1-210ENST00000572787 POLR2KP53803 58 aaKnown RBP1.68□□□□□ -2.14
TOPBP1-210ENST00000572787 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
TOPBP1-210ENST00000572787 C2CD3Q4AC94 2353 aa1.67□□□□□ -2.14
TOPBP1-210ENST00000572787 S4R3F8 94 aa1.67□□□□□ -2.14
TOPBP1-210ENST00000572787 MMP24-AS1A0A0U1RRL7 71 aa1.66□□□□□ -2.14
TOPBP1-210ENST00000572787 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
TOPBP1-210ENST00000572787 LCE1BQ5T7P3 118 aa1.66□□□□□ -2.14
TOPBP1-210ENST00000572787 HIVEP2P31629 2446 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms