RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 TRAV23DV6A0A075B6W5 121 aa6.54□□□□□ -1.36
CCDC40-208ENST00000572270 LINC00587B1AMM8 73 aa6.53□□□□□ -1.36
CCDC40-208ENST00000572270 C6orf99Q4VX62 202 aa6.53□□□□□ -1.36
CCDC40-208ENST00000572270 MAP1LC3CQ9BXW4 147 aa6.53□□□□□ -1.36
CCDC40-208ENST00000572270 C11orf86A6NJI1 115 aa6.52□□□□□ -1.37
CCDC40-208ENST00000572270 C9JQL5 133 aa6.52□□□□□ -1.37
CCDC40-208ENST00000572270 ZNF73O43830 326 aaPredicted RBP6.52□□□□□ -1.37
CCDC40-208ENST00000572270 HINT1P49773 126 aaPredicted RBP6.52□□□□□ -1.37
CCDC40-208ENST00000572270 Q1RN00 199 aa6.52□□□□□ -1.37
CCDC40-208ENST00000572270 PCP2Q8IVA1 136 aa6.52□□□□□ -1.37
CCDC40-208ENST00000572270 SPANXB1Q9NS25 103 aaPredicted RBP6.52□□□□□ -1.37
CCDC40-208ENST00000572270 LINC01546A6NGU7 62 aa6.51□□□□□ -1.37
CCDC40-208ENST00000572270 AKR1D1P51857 326 aa6.51□□□□□ -1.37
CCDC40-208ENST00000572270 HERV-K104P63124 156 aa6.51□□□□□ -1.37
CCDC40-208ENST00000572270 TCL1BO95988 128 aa6.5□□□□□ -1.37
CCDC40-208ENST00000572270 TCTE3Q8IZS6 198 aa6.5□□□□□ -1.37
CCDC40-208ENST00000572270 OBSCN-AS1Q96MR7 158 aa6.5□□□□□ -1.37
CCDC40-208ENST00000572270 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
CCDC40-208ENST00000572270 KRTAP3-2Q9BYR7 98 aa6.5□□□□□ -1.37
CCDC40-208ENST00000572270 SMCO4Q9NRQ5 59 aa6.5□□□□□ -1.37
CCDC40-208ENST00000572270 PEA15Q15121 130 aa6.49□□□□□ -1.37
CCDC40-208ENST00000572270 MIEN1Q9BRT3 115 aa6.48□□□□□ -1.37
CCDC40-208ENST00000572270 TAL2Q16559 108 aa6.47□□□□□ -1.37
CCDC40-208ENST00000572270 DHRS4-AS1Q9P1J3 65 aa6.47□□□□□ -1.37
CCDC40-208ENST00000572270 COMMD7Q86VX2 200 aa6.46□□□□□ -1.38
CCDC40-208ENST00000572270 BAGE3Q86Y29 109 aa6.46□□□□□ -1.38
CCDC40-208ENST00000572270 CBY1Q9Y3M2 126 aa6.46□□□□□ -1.38
CCDC40-208ENST00000572270 LOC107984156A0A0G2JMH3 177 aa6.45□□□□□ -1.38
CCDC40-208ENST00000572270 TMEM223A0PJW6 202 aa6.45□□□□□ -1.38
CCDC40-208ENST00000572270 ARL17AQ8IVW1 177 aa6.45□□□□□ -1.38
CCDC40-208ENST00000572270 DEFB105AQ8NG35 78 aa6.45□□□□□ -1.38
CCDC40-208ENST00000572270 ANAPC16Q96DE5 110 aa6.44□□□□□ -1.38
CCDC40-208ENST00000572270 A0A0G2JQZ4 141 aa6.43□□□□□ -1.38
CCDC40-208ENST00000572270 MYMXA0A1B0GTQ4 84 aa6.43□□□□□ -1.38
CCDC40-208ENST00000572270 NDUFC2O95298 119 aa6.43□□□□□ -1.38
CCDC40-208ENST00000572270 HBDP02042 147 aa6.43□□□□□ -1.38
CCDC40-208ENST00000572270 MT-ND4LP03901 98 aa6.43□□□□□ -1.38
CCDC40-208ENST00000572270 TEX49A0A1B0GTD5 131 aa6.42□□□□□ -1.38
CCDC40-208ENST00000572270 RBM12B-AS1Q9P1G2 102 aa6.42□□□□□ -1.38
CCDC40-208ENST00000572270 Q96NJ1 140 aa6.41□□□□□ -1.38
CCDC40-208ENST00000572270 A0A096LNJ9 63 aa6.39□□□□□ -1.39
CCDC40-208ENST00000572270 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
CCDC40-208ENST00000572270 IGFL1Q6UW32 110 aa6.36□□□□□ -1.39
CCDC40-208ENST00000572270 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
CCDC40-208ENST00000572270 IFITM2Q01629 132 aa6.35□□□□□ -1.39
CCDC40-208ENST00000572270 Q6ZVH6 145 aa6.35□□□□□ -1.39
CCDC40-208ENST00000572270 COX7BP24311 80 aa6.34□□□□□ -1.39
CCDC40-208ENST00000572270 ELOF1P60002 83 aaKnown RBP6.34□□□□□ -1.39
CCDC40-208ENST00000572270 RHEBQ15382 184 aa6.34□□□□□ -1.39
CCDC40-208ENST00000572270 PMCHL1Q16048 86 aa6.34□□□□□ -1.39
CCDC40-208ENST00000572270 OR13C6PQ8NH95 151 aa6.34□□□□□ -1.39
CCDC40-208ENST00000572270 Q8N9P0 234 aaPredicted RBP6.33□□□□□ -1.4
CCDC40-208ENST00000572270 A8MUU9 505 aa6.32□□□□□ -1.4
CCDC40-208ENST00000572270 NPC2P61916 151 aa6.32□□□□□ -1.4
CCDC40-208ENST00000572270 LINC00614P0C842 121 aa6.31□□□□□ -1.4
CCDC40-208ENST00000572270 RPS10P5Q9NQ39 176 aa6.31□□□□□ -1.4
CCDC40-208ENST00000572270 TRAV12-1A0A0B4J245 112 aa6.3□□□□□ -1.4
CCDC40-208ENST00000572270 MPLKIPQ8TAP9 179 aa6.3□□□□□ -1.4
CCDC40-208ENST00000572270 A8MWP4 228 aa6.29□□□□□ -1.4
CCDC40-208ENST00000572270 TSPEAR-AS2P59090 65 aa6.29□□□□□ -1.4
CCDC40-208ENST00000572270 FABP9Q0Z7S8 132 aa6.29□□□□□ -1.4
CCDC40-208ENST00000572270 SOSTDC1Q6X4U4 206 aa6.29□□□□□ -1.4
CCDC40-208ENST00000572270 MDN1Q9NU22 5596 aa6.28□□□□□ -1.4
CCDC40-208ENST00000572270 IGLV5-48A0A075B6I7 105 aa6.28□□□□□ -1.4
CCDC40-208ENST00000572270 HRES1P13985 223 aa6.28□□□□□ -1.4
CCDC40-208ENST00000572270 F8WEM9 126 aa6.27□□□□□ -1.41
CCDC40-208ENST00000572270 LEPROTO15243 131 aa6.27□□□□□ -1.41
CCDC40-208ENST00000572270 KRTAP5-9P26371 169 aa6.27□□□□□ -1.41
CCDC40-208ENST00000572270 MTURNQ8N3F0 131 aa6.27□□□□□ -1.41
CCDC40-208ENST00000572270 URB1-AS1Q96HZ7 61 aa6.27□□□□□ -1.41
CCDC40-208ENST00000572270 hCG_2014768A0A024R1R8 64 aa6.26□□□□□ -1.41
CCDC40-208ENST00000572270 TRBV7-7A0A0K0K1E9 115 aa6.26□□□□□ -1.41
CCDC40-208ENST00000572270 EIF4EBP3O60516 100 aaPredicted RBP6.26□□□□□ -1.41
CCDC40-208ENST00000572270 SEC11CQ9BY50 192 aa6.26□□□□□ -1.41
CCDC40-208ENST00000572270 A6NN06 94 aa6.25□□□□□ -1.41
CCDC40-208ENST00000572270 NMUP48645 174 aa6.25□□□□□ -1.41
CCDC40-208ENST00000572270 COX19Q49B96 90 aa6.25□□□□□ -1.41
CCDC40-208ENST00000572270 IFI27L1Q96BM0 104 aa6.25□□□□□ -1.41
CCDC40-208ENST00000572270 J3QQQ9 107 aa6.24□□□□□ -1.41
CCDC40-208ENST00000572270 LST1O00453 97 aa6.24□□□□□ -1.41
CCDC40-208ENST00000572270 C18orf32Q8TCD1 76 aa6.24□□□□□ -1.41
CCDC40-208ENST00000572270 SPANXDQ9BXN6 97 aa6.24□□□□□ -1.41
CCDC40-208ENST00000572270 SPANXCQ9NY87 97 aa6.24□□□□□ -1.41
CCDC40-208ENST00000572270 KMT2DO14686 5537 aa6.24□□□□□ -1.41
CCDC40-208ENST00000572270 S100PP25815 95 aa6.23□□□□□ -1.41
CCDC40-208ENST00000572270 TRBV7-6A0A0J9YX20 115 aa6.21□□□□□ -1.42
CCDC40-208ENST00000572270 KRTAP16-1A8MUX0 517 aa6.21□□□□□ -1.42
CCDC40-208ENST00000572270 CLEC2BQ92478 149 aa6.21□□□□□ -1.42
CCDC40-208ENST00000572270 A0A1B0GWB2 263 aa6.2□□□□□ -1.42
CCDC40-208ENST00000572270 HERVK_113P61574 105 aa6.2□□□□□ -1.42
CCDC40-208ENST00000572270 ADAMTSL4-AS1Q5T5F5 129 aa6.2□□□□□ -1.42
CCDC40-208ENST00000572270 Q6JHZ5 121 aa6.2□□□□□ -1.42
CCDC40-208ENST00000572270 NOTCH2NLQ7Z3S9 236 aa6.18□□□□□ -1.42
CCDC40-208ENST00000572270 A0A0J9YXY3 114 aa6.17□□□□□ -1.42
CCDC40-208ENST00000572270 H0Y8G0 127 aa6.17□□□□□ -1.42
CCDC40-208ENST00000572270 NHP2Q9NX24 153 aaKnown RBP6.17□□□□□ -1.42
CCDC40-208ENST00000572270 ZNF815PA8K554 130 aa6.16□□□□□ -1.42
CCDC40-208ENST00000572270 LINC00308Q8TCZ7 52 aa6.16□□□□□ -1.42
CCDC40-208ENST00000572270 GHRHP01286 108 aa6.15□□□□□ -1.42
CCDC40-208ENST00000572270 DSCR10P59022 87 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms