RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 SMCR5Q8TEV8 140 aa4.14□□□□□ -1.75
SMG6-209ENST00000571442 HSBP1L1C9JCN9 74 aa4.13□□□□□ -1.75
SMG6-209ENST00000571442 COX8AP10176 69 aa4.13□□□□□ -1.75
SMG6-209ENST00000571442 AKR1D1P51857 326 aa4.13□□□□□ -1.75
SMG6-209ENST00000571442 Q9BRP9 147 aa4.13□□□□□ -1.75
SMG6-209ENST00000571442 HIGD2AQ9BW72 106 aa4.13□□□□□ -1.75
SMG6-209ENST00000571442 PAM16Q9Y3D7 125 aa4.13□□□□□ -1.75
SMG6-209ENST00000571442 TRAV23DV6A0A075B6W5 121 aa4.12□□□□□ -1.75
SMG6-209ENST00000571442 SPATA45Q537H7 98 aa4.12□□□□□ -1.75
SMG6-209ENST00000571442 S100A7L2Q5SY68 101 aa4.12□□□□□ -1.75
SMG6-209ENST00000571442 C14orf144Q96I85 54 aa4.12□□□□□ -1.75
SMG6-209ENST00000571442 ETDCA0A1B0GVM5 59 aa4.11□□□□□ -1.75
SMG6-209ENST00000571442 IFITM1P13164 125 aa4.11□□□□□ -1.75
SMG6-209ENST00000571442 C2orf91Q6ZV80 131 aa4.11□□□□□ -1.75
SMG6-209ENST00000571442 OR13C6PQ8NH95 151 aa4.11□□□□□ -1.75
SMG6-209ENST00000571442 SPRR4Q96PI1 79 aa4.11□□□□□ -1.75
SMG6-209ENST00000571442 LRP2P98164 4655 aa4.11□□□□□ -1.75
SMG6-209ENST00000571442 ZNF73O43830 326 aaPredicted RBP4.1□□□□□ -1.75
SMG6-209ENST00000571442 Q6ZRX8 168 aa4.1□□□□□ -1.75
SMG6-209ENST00000571442 Q6ZVH6 145 aa4.1□□□□□ -1.75
SMG6-209ENST00000571442 C3orf22Q8N5N4 141 aa4.1□□□□□ -1.75
SMG6-209ENST00000571442 PPDPFQ9H3Y8 114 aa4.1□□□□□ -1.75
SMG6-209ENST00000571442 LPAP08519 4548 aa4.1□□□□□ -1.75
SMG6-209ENST00000571442 RNF213Q63HN8 5207 aa4.09□□□□□ -1.75
SMG6-209ENST00000571442 A4D1N5 150 aa4.09□□□□□ -1.75
SMG6-209ENST00000571442 DLEU1O43261 78 aa4.09□□□□□ -1.75
SMG6-209ENST00000571442 ST20-AS1Q8NBB2 130 aa4.09□□□□□ -1.75
SMG6-209ENST00000571442 C12orf57Q99622 126 aa4.09□□□□□ -1.75
SMG6-209ENST00000571442 VAMP8Q9BV40 100 aa4.09□□□□□ -1.75
SMG6-209ENST00000571442 CRYGAP11844 174 aa4.08□□□□□ -1.76
SMG6-209ENST00000571442 C6orf99Q4VX62 202 aa4.08□□□□□ -1.76
SMG6-209ENST00000571442 LINC00518Q8N0U6 118 aa4.08□□□□□ -1.76
SMG6-209ENST00000571442 A6NDN8 102 aa4.07□□□□□ -1.76
SMG6-209ENST00000571442 ELOF1P60002 83 aaKnown RBP4.07□□□□□ -1.76
SMG6-209ENST00000571442 FAM229BQ4G0N7 80 aa4.07□□□□□ -1.76
SMG6-209ENST00000571442 LINC00483Q53H64 154 aa4.07□□□□□ -1.76
SMG6-209ENST00000571442 GAGE2AQ6NT46 116 aa4.07□□□□□ -1.76
SMG6-209ENST00000571442 TYMSOSQ8TAI1 123 aa4.07□□□□□ -1.76
SMG6-209ENST00000571442 SMIM11BQ8TCY0 68 aa4.07□□□□□ -1.76
SMG6-209ENST00000571442 RPL13AP40429 203 aaKnown RBP4.06□□□□□ -1.76
SMG6-209ENST00000571442 S100A12P80511 92 aa4.06□□□□□ -1.76
SMG6-209ENST00000571442 SLC25A34Q6PIV7 304 aa4.06□□□□□ -1.76
SMG6-209ENST00000571442 HIST1H4GQ99525 98 aa4.06□□□□□ -1.76
SMG6-209ENST00000571442 HIGD1BQ9P298 99 aa4.06□□□□□ -1.76
SMG6-209ENST00000571442 TSPAN13O95857 204 aa4.05□□□□□ -1.76
SMG6-209ENST00000571442 COX7BP24311 80 aa4.05□□□□□ -1.76
SMG6-209ENST00000571442 COPS9Q8WXC6 57 aa4.05□□□□□ -1.76
SMG6-209ENST00000571442 TRAV13-2A0A0B4J235 113 aa4.04□□□□□ -1.76
SMG6-209ENST00000571442 CFC1BP0CG36 223 aa4.04□□□□□ -1.76
SMG6-209ENST00000571442 CFC1P0CG37 223 aa4.04□□□□□ -1.76
SMG6-209ENST00000571442 FXYD2P54710 66 aa4.04□□□□□ -1.76
SMG6-209ENST00000571442 LINC01547P58512 204 aaPredicted RBP4.04□□□□□ -1.76
SMG6-209ENST00000571442 ZNF706Q9Y5V0 76 aaPredicted RBP4.04□□□□□ -1.76
SMG6-209ENST00000571442 CEND1Q8N111 149 aa4.03□□□□□ -1.76
SMG6-209ENST00000571442 LINC00304Q8N9R0 145 aa4.03□□□□□ -1.76
SMG6-209ENST00000571442 IGLV9-49A0A0B4J1Y8 123 aa4.02□□□□□ -1.77
SMG6-209ENST00000571442 TRBV7-6A0A0J9YX20 115 aa4.02□□□□□ -1.77
SMG6-209ENST00000571442 LOC105371267A0A1B0GV96 52 aa4.02□□□□□ -1.77
SMG6-209ENST00000571442 A0A1B0GWB2 263 aa4.02□□□□□ -1.77
SMG6-209ENST00000571442 SPRR1BP22528 89 aa4.02□□□□□ -1.77
SMG6-209ENST00000571442 HINT1P49773 126 aaPredicted RBP4.02□□□□□ -1.77
SMG6-209ENST00000571442 MOBPQ13875 183 aa4.02□□□□□ -1.77
SMG6-209ENST00000571442 Q8NBF4 154 aa4.02□□□□□ -1.77
SMG6-209ENST00000571442 PRO1933Q9H354 126 aa4.02□□□□□ -1.77
SMG6-209ENST00000571442 DHRS4-AS1Q9P1J3 65 aa4.02□□□□□ -1.77
SMG6-209ENST00000571442 CBY1Q9Y3M2 126 aa4.02□□□□□ -1.77
SMG6-209ENST00000571442 A0A0B4J2C4 111 aa4.01□□□□□ -1.77
SMG6-209ENST00000571442 H7C2G1 150 aa4.01□□□□□ -1.77
SMG6-209ENST00000571442 TAL2Q16559 108 aa4.01□□□□□ -1.77
SMG6-209ENST00000571442 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
SMG6-209ENST00000571442 RETNLBQ9BQ08 111 aa4.01□□□□□ -1.77
SMG6-209ENST00000571442 A0A0G2JQZ4 141 aa4□□□□□ -1.77
SMG6-209ENST00000571442 K7ERJ3 54 aa4□□□□□ -1.77
SMG6-209ENST00000571442 LINC00575Q6W349 94 aa4□□□□□ -1.77
SMG6-209ENST00000571442 DEFB105AQ8NG35 78 aa4□□□□□ -1.77
SMG6-209ENST00000571442 FAM218AQ96MZ4 157 aa4□□□□□ -1.77
SMG6-209ENST00000571442 UQCR10Q9UDW1 63 aa4□□□□□ -1.77
SMG6-209ENST00000571442 IGLV5-48A0A075B6I7 105 aa3.99□□□□□ -1.77
SMG6-209ENST00000571442 HSD52Q0P140 79 aa3.99□□□□□ -1.77
SMG6-209ENST00000571442 Q1RN00 199 aa3.99□□□□□ -1.77
SMG6-209ENST00000571442 Q8N377 158 aa3.99□□□□□ -1.77
SMG6-209ENST00000571442 PRR4Q16378 134 aa3.98□□□□□ -1.77
SMG6-209ENST00000571442 C9orf153Q5TBE3 101 aa3.98□□□□□ -1.77
SMG6-209ENST00000571442 RAB37Q96AX2 223 aa3.98□□□□□ -1.77
SMG6-209ENST00000571442 NHP2Q9NX24 153 aaKnown RBP3.98□□□□□ -1.77
SMG6-209ENST00000571442 TEX49A0A1B0GTD5 131 aa3.97□□□□□ -1.77
SMG6-209ENST00000571442 SMIM6P0DI80 62 aa3.97□□□□□ -1.77
SMG6-209ENST00000571442 BVES-AS1Q5T3Y7 98 aa3.97□□□□□ -1.77
SMG6-209ENST00000571442 Q6ZQY7 126 aa3.97□□□□□ -1.77
SMG6-209ENST00000571442 SSBP3-AS1Q7Z2R9 100 aa3.97□□□□□ -1.77
SMG6-209ENST00000571442 PRO1854Q9UHT4 67 aa3.97□□□□□ -1.77
SMG6-209ENST00000571442 MUC17Q685J3 4493 aa3.97□□□□□ -1.77
SMG6-209ENST00000571442 hADV29S1A0JD25 119 aa3.96□□□□□ -1.78
SMG6-209ENST00000571442 TRIAP1O43715 76 aa3.96□□□□□ -1.78
SMG6-209ENST00000571442 SPAG11AQ6PDA7 123 aa3.96□□□□□ -1.78
SMG6-209ENST00000571442 HRCT1Q6UXD1 115 aa3.96□□□□□ -1.78
SMG6-209ENST00000571442 TMEM238LA0A1B0GVL6 79 aa3.95□□□□□ -1.78
SMG6-209ENST00000571442 A6NJY4 79 aa3.95□□□□□ -1.78
SMG6-209ENST00000571442 CTAG1AP78358 180 aa3.95□□□□□ -1.78
SMG6-209ENST00000571442 VAMP3Q15836 100 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms