RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 BAALC-AS2P0C853 105 aa4.55□□□□□ -1.68
SMG1-217ENST00000569764 IGHV3-64A0A075B6Q5 118 aa4.54□□□□□ -1.68
SMG1-217ENST00000569764 D6R8Y8 96 aa4.54□□□□□ -1.68
SMG1-217ENST00000569764 C9orf116Q5BN46 136 aaPredicted RBP4.54□□□□□ -1.68
SMG1-217ENST00000569764 MUSTN1Q8IVN3 82 aa4.54□□□□□ -1.68
SMG1-217ENST00000569764 TRAV22A0A0B4J277 110 aa4.54□□□□□ -1.68
SMG1-217ENST00000569764 Q8N814 137 aa4.54□□□□□ -1.68
SMG1-217ENST00000569764 TRBV6-1A0A0K0K1D8 114 aa4.54□□□□□ -1.68
SMG1-217ENST00000569764 A0A1B0GUT8 65 aa4.54□□□□□ -1.68
SMG1-217ENST00000569764 Q1T7F1 81 aa4.54□□□□□ -1.68
SMG1-217ENST00000569764 KLK12Q9UKR0 248 aa4.54□□□□□ -1.68
SMG1-217ENST00000569764 SDHAF1A6NFY7 115 aa4.53□□□□□ -1.68
SMG1-217ENST00000569764 LYZL1Q6UWQ5 148 aa4.53□□□□□ -1.68
SMG1-217ENST00000569764 CASC2Q6XLA1 102 aa4.53□□□□□ -1.68
SMG1-217ENST00000569764 A0A096LPF7 62 aa4.53□□□□□ -1.68
SMG1-217ENST00000569764 IGLV5-37A0A075B6J1 123 aa4.52□□□□□ -1.69
SMG1-217ENST00000569764 Q8NAQ8 132 aa4.52□□□□□ -1.69
SMG1-217ENST00000569764 SMCR5Q8TEV8 140 aa4.52□□□□□ -1.69
SMG1-217ENST00000569764 Q6ZTI0 123 aa4.51□□□□□ -1.69
SMG1-217ENST00000569764 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
SMG1-217ENST00000569764 CAMK2N2Q96S95 79 aa4.51□□□□□ -1.69
SMG1-217ENST00000569764 APLNQ9ULZ1 77 aa4.51□□□□□ -1.69
SMG1-217ENST00000569764 IGHV3-16A0A0C4DH30 117 aa4.51□□□□□ -1.69
SMG1-217ENST00000569764 I3L3M4 83 aa4.51□□□□□ -1.69
SMG1-217ENST00000569764 A8MWP4 228 aa4.51□□□□□ -1.69
SMG1-217ENST00000569764 NDUFA1O15239 70 aa4.51□□□□□ -1.69
SMG1-217ENST00000569764 ZFAND2AQ8N6M9 145 aa4.51□□□□□ -1.69
SMG1-217ENST00000569764 OCR1Q9BZK8 76 aa4.51□□□□□ -1.69
SMG1-217ENST00000569764 IGHV3-73A0A0B4J1V6 119 aa4.5□□□□□ -1.69
SMG1-217ENST00000569764 KLKP1Q107X0 134 aa4.5□□□□□ -1.69
SMG1-217ENST00000569764 LINC01556Q5JQF7 62 aa4.5□□□□□ -1.69
SMG1-217ENST00000569764 hDV103S1A0JD37 113 aa4.5□□□□□ -1.69
SMG1-217ENST00000569764 GFRA4Q9GZZ7 299 aa4.5□□□□□ -1.69
SMG1-217ENST00000569764 A0A096LNJ9 63 aa4.5□□□□□ -1.69
SMG1-217ENST00000569764 TRBV30A0A0K0K1B3 111 aa4.49□□□□□ -1.69
SMG1-217ENST00000569764 ATP5EP2Q5VTU8 51 aa4.49□□□□□ -1.69
SMG1-217ENST00000569764 DEFB104AQ8WTQ1 72 aa4.49□□□□□ -1.69
SMG1-217ENST00000569764 TOMM7Q9P0U1 55 aa4.49□□□□□ -1.69
SMG1-217ENST00000569764 C1orf64Q8NEQ6 169 aa4.49□□□□□ -1.69
SMG1-217ENST00000569764 PRKDCP78527 4128 aaKnown RBP4.48□□□□□ -1.69
SMG1-217ENST00000569764 HIGD2BQ4VC39 106 aa4.48□□□□□ -1.69
SMG1-217ENST00000569764 UBE2D4Q9Y2X8 147 aa4.48□□□□□ -1.69
SMG1-217ENST00000569764 RNASE13Q5GAN3 156 aaKnown RBP4.48□□□□□ -1.69
SMG1-217ENST00000569764 LINC01600Q96MT4 127 aa4.48□□□□□ -1.69
SMG1-217ENST00000569764 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
SMG1-217ENST00000569764 SUMO4Q6EEV6 95 aa4.47□□□□□ -1.69
SMG1-217ENST00000569764 F8VRH5 84 aa4.47□□□□□ -1.69
SMG1-217ENST00000569764 BCE1O60756 84 aa4.47□□□□□ -1.69
SMG1-217ENST00000569764 C14orf178Q8N769 122 aaPredicted RBP4.47□□□□□ -1.69
SMG1-217ENST00000569764 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
SMG1-217ENST00000569764 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.46□□□□□ -1.69
SMG1-217ENST00000569764 CNFNQ9BYD5 112 aa4.46□□□□□ -1.69
SMG1-217ENST00000569764 UBL5Q9BZL1 73 aa4.46□□□□□ -1.69
SMG1-217ENST00000569764 RNASE3P12724 160 aaKnown RBP4.46□□□□□ -1.7
SMG1-217ENST00000569764 CSNK1G2-AS1Q8NCQ2 148 aa4.46□□□□□ -1.7
SMG1-217ENST00000569764 IGLV5-39A0A0G2JS06 123 aa4.46□□□□□ -1.7
SMG1-217ENST00000569764 ENHOQ6UWT2 76 aa4.45□□□□□ -1.7
SMG1-217ENST00000569764 IGLV4-3A0A075B6K6 122 aa4.45□□□□□ -1.7
SMG1-217ENST00000569764 LINC00315P59091 139 aa4.45□□□□□ -1.7
SMG1-217ENST00000569764 TRBV6-8A0A0A6YYG3 113 aa4.45□□□□□ -1.7
SMG1-217ENST00000569764 TRBV10-3A0A0K0K1G6 114 aa4.45□□□□□ -1.7
SMG1-217ENST00000569764 RPL37AP61513 92 aaKnown RBP4.45□□□□□ -1.7
SMG1-217ENST00000569764 ROMO1P60602 79 aa4.44□□□□□ -1.7
SMG1-217ENST00000569764 IGLV4-69A0A075B6H9 119 aa4.44□□□□□ -1.7
SMG1-217ENST00000569764 DNAH10OSP0CZ25 163 aa4.44□□□□□ -1.7
SMG1-217ENST00000569764 RTL8CO15255 209 aa4.43□□□□□ -1.7
SMG1-217ENST00000569764 MIR22HGQ0VDD5 57 aa4.43□□□□□ -1.7
SMG1-217ENST00000569764 MOBPQ13875 183 aa4.43□□□□□ -1.7
SMG1-217ENST00000569764 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
SMG1-217ENST00000569764 DNAH9Q9NYC9 4486 aa4.43□□□□□ -1.7
SMG1-217ENST00000569764 TRAV12-1A0A0B4J245 112 aa4.43□□□□□ -1.7
SMG1-217ENST00000569764 Q5VV11 94 aa4.43□□□□□ -1.7
SMG1-217ENST00000569764 RPL39LQ96EH5 51 aaKnown RBP4.43□□□□□ -1.7
SMG1-217ENST00000569764 IGLV8-61A0A075B6I0 122 aa4.42□□□□□ -1.7
SMG1-217ENST00000569764 SMIM1B2RUZ4 78 aa4.42□□□□□ -1.7
SMG1-217ENST00000569764 SPAG11BQ08648 103 aa4.42□□□□□ -1.7
SMG1-217ENST00000569764 Q6ZQT0 140 aa4.42□□□□□ -1.7
SMG1-217ENST00000569764 KIF25-AS1Q9Y6Z4 181 aa4.42□□□□□ -1.7
SMG1-217ENST00000569764 CIRBP-AS1Q8TBR5 109 aa4.42□□□□□ -1.7
SMG1-217ENST00000569764 LIMD2Q9BT23 127 aa4.42□□□□□ -1.7
SMG1-217ENST00000569764 CYP4F30PQ9H0H9 118 aa4.42□□□□□ -1.7
SMG1-217ENST00000569764 HECTD4Q9Y4D8 3996 aa4.41□□□□□ -1.7
SMG1-217ENST00000569764 TMEM254Q8TBM7 123 aa4.41□□□□□ -1.7
SMG1-217ENST00000569764 IGKV2-24A0A0C4DH68 120 aa4.41□□□□□ -1.7
SMG1-217ENST00000569764 C14orf132Q9NPU4 83 aa4.4□□□□□ -1.7
SMG1-217ENST00000569764 A0A087WTM6 91 aa4.4□□□□□ -1.7
SMG1-217ENST00000569764 C11orf86A6NJI1 115 aa4.4□□□□□ -1.7
SMG1-217ENST00000569764 A8MTW9 85 aa4.4□□□□□ -1.7
SMG1-217ENST00000569764 ZNF625Q96I27 306 aaPredicted RBP4.4□□□□□ -1.7
SMG1-217ENST00000569764 XAGE1AQ9HD64 81 aa4.4□□□□□ -1.7
SMG1-217ENST00000569764 HAMPP81172 84 aa4.4□□□□□ -1.71
SMG1-217ENST00000569764 LINC00846Q9NV44 126 aa4.4□□□□□ -1.71
SMG1-217ENST00000569764 LINC01546A6NGU7 62 aa4.39□□□□□ -1.71
SMG1-217ENST00000569764 LECT2O14960 151 aa4.39□□□□□ -1.71
SMG1-217ENST00000569764 IGLV10-54A0A075B6I4 117 aa4.39□□□□□ -1.71
SMG1-217ENST00000569764 Q8NBF4 154 aa4.39□□□□□ -1.71
SMG1-217ENST00000569764 TENM3Q9P273 2699 aa4.39□□□□□ -1.71
SMG1-217ENST00000569764 GIG44P09565 113 aaPredicted RBP4.39□□□□□ -1.71
SMG1-217ENST00000569764 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
SMG1-217ENST00000569764 ETDCA0A1B0GVM5 59 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms