RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 KRTAP13-1Q8IUC0 172 aa10.19□□□□□ -0.78
COMMD4-224ENST00000568877 PRO1933Q9H354 126 aa10.19□□□□□ -0.78
COMMD4-224ENST00000568877 TRAV13-2A0A0B4J235 113 aa10.18□□□□□ -0.78
COMMD4-224ENST00000568877 C12orf57Q99622 126 aa10.18□□□□□ -0.78
COMMD4-224ENST00000568877 KRTAP4-16G5E9R7 235 aaPredicted RBP10.17□□□□□ -0.78
COMMD4-224ENST00000568877 PRLHP81277 87 aa10.17□□□□□ -0.78
COMMD4-224ENST00000568877 CEND1Q8N111 149 aa10.17□□□□□ -0.78
COMMD4-224ENST00000568877 DIRC1Q969H9 104 aa10.17□□□□□ -0.78
COMMD4-224ENST00000568877 PCLOQ9Y6V0 5065 aa10.16□□□□□ -0.78
COMMD4-224ENST00000568877 ETDCA0A1B0GVM5 59 aa10.16□□□□□ -0.78
COMMD4-224ENST00000568877 ZNF73O43830 326 aaPredicted RBP10.16□□□□□ -0.78
COMMD4-224ENST00000568877 H0Y9J4 135 aa10.15□□□□□ -0.78
COMMD4-224ENST00000568877 HSD52Q0P140 79 aa10.15□□□□□ -0.78
COMMD4-224ENST00000568877 B5MCH6 92 aa10.13□□□□□ -0.79
COMMD4-224ENST00000568877 CFC1BP0CG36 223 aa10.12□□□□□ -0.79
COMMD4-224ENST00000568877 CFC1P0CG37 223 aa10.12□□□□□ -0.79
COMMD4-224ENST00000568877 HINT1P49773 126 aaPredicted RBP10.12□□□□□ -0.79
COMMD4-224ENST00000568877 FAT3Q8TDW7 4589 aa10.11□□□□□ -0.79
COMMD4-224ENST00000568877 TMEM238LA0A1B0GVL6 79 aa10.11□□□□□ -0.79
COMMD4-224ENST00000568877 A6NJY4 79 aa10.11□□□□□ -0.79
COMMD4-224ENST00000568877 FXYD2P54710 66 aa10.11□□□□□ -0.79
COMMD4-224ENST00000568877 HIGD2AQ9BW72 106 aa10.11□□□□□ -0.79
COMMD4-224ENST00000568877 C6orf99Q4VX62 202 aa10.1□□□□□ -0.79
COMMD4-224ENST00000568877 Q6ZRX8 168 aa10.1□□□□□ -0.79
COMMD4-224ENST00000568877 SMIM11BQ8TCY0 68 aa10.1□□□□□ -0.79
COMMD4-224ENST00000568877 MYCBP2O75592 4640 aa10.1□□□□□ -0.79
COMMD4-224ENST00000568877 A0A0B4J2C4 111 aa10.09□□□□□ -0.79
COMMD4-224ENST00000568877 TSTD3H0UI37 97 aa10.09□□□□□ -0.79
COMMD4-224ENST00000568877 RPL13AP40429 203 aaKnown RBP10.09□□□□□ -0.79
COMMD4-224ENST00000568877 RAB37Q96AX2 223 aa10.09□□□□□ -0.79
COMMD4-224ENST00000568877 LRP1Q07954 4544 aaKnown RBP10.08□□□□□ -0.8
COMMD4-224ENST00000568877 OXTP01178 125 aa10.07□□□□□ -0.8
COMMD4-224ENST00000568877 SMCR5Q8TEV8 140 aa10.07□□□□□ -0.8
COMMD4-224ENST00000568877 Q9BRP9 147 aa10.07□□□□□ -0.8
COMMD4-224ENST00000568877 TRBV7-6A0A0J9YX20 115 aa10.06□□□□□ -0.8
COMMD4-224ENST00000568877 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
COMMD4-224ENST00000568877 COX7BP24311 80 aa10.06□□□□□ -0.8
COMMD4-224ENST00000568877 FLG2Q5D862 2391 aaPredicted RBP10.06□□□□□ -0.8
COMMD4-224ENST00000568877 ELOF1P60002 83 aaKnown RBP10.05□□□□□ -0.8
COMMD4-224ENST00000568877 CTAG1AP78358 180 aa10.05□□□□□ -0.8
COMMD4-224ENST00000568877 KRTAP1-4P0C5Y4 121 aa10.04□□□□□ -0.8
COMMD4-224ENST00000568877 LINC01600Q96MT4 127 aa10.04□□□□□ -0.8
COMMD4-224ENST00000568877 NHP2Q9NX24 153 aaKnown RBP10.04□□□□□ -0.8
COMMD4-224ENST00000568877 PRO1854Q9UHT4 67 aa10.04□□□□□ -0.8
COMMD4-224ENST00000568877 A0A1B0GWB2 263 aa10.03□□□□□ -0.8
COMMD4-224ENST00000568877 H7C2G1 150 aa10.03□□□□□ -0.8
COMMD4-224ENST00000568877 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
COMMD4-224ENST00000568877 ERC2-IT1O76042 136 aa10.02□□□□□ -0.81
COMMD4-224ENST00000568877 DHRS4-AS1Q9P1J3 65 aa10.02□□□□□ -0.81
COMMD4-224ENST00000568877 VAMP3Q15836 100 aa10.01□□□□□ -0.81
COMMD4-224ENST00000568877 ZNF706Q9Y5V0 76 aaPredicted RBP10.01□□□□□ -0.81
COMMD4-224ENST00000568877 K7ERJ3 54 aa10□□□□□ -0.81
COMMD4-224ENST00000568877 M0R143 59 aa10□□□□□ -0.81
COMMD4-224ENST00000568877 SPRR4Q96PI1 79 aa10□□□□□ -0.81
COMMD4-224ENST00000568877 Q1RN00 199 aa9.99□□□□□ -0.81
COMMD4-224ENST00000568877 J3QL48 77 aa9.98□□□□□ -0.81
COMMD4-224ENST00000568877 PRR26Q8N8Z3 221 aa9.98□□□□□ -0.81
COMMD4-224ENST00000568877 ANAPC11Q9NYG5 84 aa9.98□□□□□ -0.81
COMMD4-224ENST00000568877 MT1HL1P0DM35 61 aa9.96□□□□□ -0.82
COMMD4-224ENST00000568877 KRTAP10-8P60410 259 aa9.96□□□□□ -0.82
COMMD4-224ENST00000568877 FAM229BQ4G0N7 80 aa9.96□□□□□ -0.82
COMMD4-224ENST00000568877 CRYGAP11844 174 aa9.95□□□□□ -0.82
COMMD4-224ENST00000568877 ST20-AS1Q8NBB2 130 aa9.95□□□□□ -0.82
COMMD4-224ENST00000568877 TNXBP22105 4242 aa9.95□□□□□ -0.82
COMMD4-224ENST00000568877 A0A087X002 238 aa9.94□□□□□ -0.82
COMMD4-224ENST00000568877 SLC25A20O43772 301 aa9.94□□□□□ -0.82
COMMD4-224ENST00000568877 GAGE2AQ6NT46 116 aa9.94□□□□□ -0.82
COMMD4-224ENST00000568877 LINC00575Q6W349 94 aa9.94□□□□□ -0.82
COMMD4-224ENST00000568877 LINC00483Q53H64 154 aa9.93□□□□□ -0.82
COMMD4-224ENST00000568877 H0YGX0 51 aa9.91□□□□□ -0.82
COMMD4-224ENST00000568877 TRIAP1O43715 76 aa9.91□□□□□ -0.82
COMMD4-224ENST00000568877 TSPAN13O95857 204 aa9.91□□□□□ -0.82
COMMD4-224ENST00000568877 hADV29S1A0JD25 119 aa9.9□□□□□ -0.82
COMMD4-224ENST00000568877 PSMB2P49721 201 aa9.9□□□□□ -0.82
COMMD4-224ENST00000568877 KRTAP13-2Q52LG2 175 aa9.89□□□□□ -0.83
COMMD4-224ENST00000568877 BATFQ16520 125 aa9.88□□□□□ -0.83
COMMD4-224ENST00000568877 SPRR1BP22528 89 aa9.87□□□□□ -0.83
COMMD4-224ENST00000568877 DEFB105AQ8NG35 78 aa9.87□□□□□ -0.83
COMMD4-224ENST00000568877 TYMSOSQ8TAI1 123 aa9.87□□□□□ -0.83
COMMD4-224ENST00000568877 IGLV5-48A0A075B6I7 105 aa9.86□□□□□ -0.83
COMMD4-224ENST00000568877 COX6CP09669 75 aa9.86□□□□□ -0.83
COMMD4-224ENST00000568877 C3orf22Q8N5N4 141 aa9.86□□□□□ -0.83
COMMD4-224ENST00000568877 FAM218AQ96MZ4 157 aa9.86□□□□□ -0.83
COMMD4-224ENST00000568877 TEX49A0A1B0GTD5 131 aa9.85□□□□□ -0.83
COMMD4-224ENST00000568877 SNCGO76070 127 aa9.85□□□□□ -0.83
COMMD4-224ENST00000568877 LINC01547P58512 204 aaPredicted RBP9.85□□□□□ -0.83
COMMD4-224ENST00000568877 Q6ZQY7 126 aa9.85□□□□□ -0.83
COMMD4-224ENST00000568877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.84□□□□□ -0.83
COMMD4-224ENST00000568877 IGLV9-49A0A0B4J1Y8 123 aa9.82□□□□□ -0.84
COMMD4-224ENST00000568877 A0A1B0GX51 115 aa9.82□□□□□ -0.84
COMMD4-224ENST00000568877 CLEC2BQ92478 149 aa9.82□□□□□ -0.84
COMMD4-224ENST00000568877 SCGB1C2P0DMR2 95 aa9.81□□□□□ -0.84
COMMD4-224ENST00000568877 Q8N377 158 aa9.81□□□□□ -0.84
COMMD4-224ENST00000568877 LAMTOR3Q9UHA4 124 aa9.81□□□□□ -0.84
COMMD4-224ENST00000568877 DMBT1Q9UGM3 2413 aaPredicted RBP9.8□□□□□ -0.84
COMMD4-224ENST00000568877 MOBPQ13875 183 aa9.79□□□□□ -0.84
COMMD4-224ENST00000568877 SMIM29Q86T20 159 aa9.79□□□□□ -0.84
COMMD4-224ENST00000568877 PCP4L1A6NKN8 68 aa9.78□□□□□ -0.84
COMMD4-224ENST00000568877 NAA38Q9BRA0 125 aaKnown RBP9.78□□□□□ -0.84
COMMD4-224ENST00000568877 SNHG12Q9BXW3 62 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms