RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 ALKAL2Q6UX46 152 aa3□□□□□ -1.93
CDH13-211ENST00000568770 AKAP14Q86UN6 197 aa3□□□□□ -1.93
CDH13-211ENST00000568770 SMCR5Q8TEV8 140 aa3□□□□□ -1.93
CDH13-211ENST00000568770 TIMM17AQ99595 171 aa3□□□□□ -1.93
CDH13-211ENST00000568770 LAMTOR2Q9Y2Q5 125 aa3□□□□□ -1.93
CDH13-211ENST00000568770 SSBP3-AS1Q7Z2R9 100 aa2.99□□□□□ -1.93
CDH13-211ENST00000568770 ERG28Q9UKR5 140 aa2.99□□□□□ -1.93
CDH13-211ENST00000568770 K7EMI3 77 aa2.98□□□□□ -1.93
CDH13-211ENST00000568770 ADCYAP1P18509 176 aa2.98□□□□□ -1.93
CDH13-211ENST00000568770 COX17Q14061 63 aa2.98□□□□□ -1.93
CDH13-211ENST00000568770 ERASQ7Z444 233 aa2.98□□□□□ -1.93
CDH13-211ENST00000568770 TOMM6Q96B49 74 aa2.98□□□□□ -1.93
CDH13-211ENST00000568770 ZNF625Q96I27 306 aaPredicted RBP2.98□□□□□ -1.93
CDH13-211ENST00000568770 SCGB3A1Q96QR1 104 aa2.98□□□□□ -1.93
CDH13-211ENST00000568770 NAT8Q9UHE5 227 aa2.98□□□□□ -1.93
CDH13-211ENST00000568770 A8MU10 97 aa2.97□□□□□ -1.93
CDH13-211ENST00000568770 C9JQL5 133 aa2.97□□□□□ -1.93
CDH13-211ENST00000568770 ERC2-IT1O76042 136 aa2.97□□□□□ -1.93
CDH13-211ENST00000568770 G0S2P27469 103 aa2.97□□□□□ -1.93
CDH13-211ENST00000568770 SPRR1AP35321 89 aa2.97□□□□□ -1.93
CDH13-211ENST00000568770 ATP5L2Q7Z4Y8 100 aa2.97□□□□□ -1.93
CDH13-211ENST00000568770 TCTE3Q8IZS6 198 aa2.97□□□□□ -1.93
CDH13-211ENST00000568770 CST9LQ9H4G1 147 aa2.97□□□□□ -1.93
CDH13-211ENST00000568770 NXT2Q9NPJ8 142 aaKnown RBP2.97□□□□□ -1.93
CDH13-211ENST00000568770 ETDCA0A1B0GVM5 59 aa2.96□□□□□ -1.94
CDH13-211ENST00000568770 H3BRM9 83 aa2.96□□□□□ -1.94
CDH13-211ENST00000568770 C9orf153Q5TBE3 101 aa2.96□□□□□ -1.94
CDH13-211ENST00000568770 KCNQ1DNQ9H478 68 aa2.96□□□□□ -1.94
CDH13-211ENST00000568770 NCR3O14931 201 aa2.95□□□□□ -1.94
CDH13-211ENST00000568770 IGLV6-57P01721 117 aa2.95□□□□□ -1.94
CDH13-211ENST00000568770 LINC00158P58513 81 aa2.95□□□□□ -1.94
CDH13-211ENST00000568770 PMVKQ15126 192 aa2.95□□□□□ -1.94
CDH13-211ENST00000568770 CEND1Q8N111 149 aa2.95□□□□□ -1.94
CDH13-211ENST00000568770 HRCT1Q6UXD1 115 aa2.94□□□□□ -1.94
CDH13-211ENST00000568770 Q9BRP9 147 aa2.94□□□□□ -1.94
CDH13-211ENST00000568770 TRBV10-3A0A0K0K1G6 114 aa2.93□□□□□ -1.94
CDH13-211ENST00000568770 IGLC3P0DOY3 106 aa2.93□□□□□ -1.94
CDH13-211ENST00000568770 ZNF22P17026 224 aaPredicted RBP2.93□□□□□ -1.94
CDH13-211ENST00000568770 RPL37P61927 97 aaKnown RBP2.93□□□□□ -1.94
CDH13-211ENST00000568770 Q6Q795 121 aa2.93□□□□□ -1.94
CDH13-211ENST00000568770 BOD1L2Q8IYS8 172 aa2.93□□□□□ -1.94
CDH13-211ENST00000568770 LIMD2Q9BT23 127 aa2.93□□□□□ -1.94
CDH13-211ENST00000568770 TRAV9-1A0A075B6T8 112 aa2.92□□□□□ -1.94
CDH13-211ENST00000568770 LINC01549A6NIU2 74 aa2.92□□□□□ -1.94
CDH13-211ENST00000568770 NDUFA6P56556 154 aa2.92□□□□□ -1.94
CDH13-211ENST00000568770 S100A12P80511 92 aa2.92□□□□□ -1.94
CDH13-211ENST00000568770 PEA15Q15121 130 aa2.92□□□□□ -1.94
CDH13-211ENST00000568770 SFTA2Q6UW10 78 aa2.92□□□□□ -1.94
CDH13-211ENST00000568770 Q6ZRX8 168 aa2.92□□□□□ -1.94
CDH13-211ENST00000568770 LINC01546A6NGU7 62 aa2.91□□□□□ -1.94
CDH13-211ENST00000568770 SMIM13P0DJ93 91 aa2.91□□□□□ -1.94
CDH13-211ENST00000568770 TMEM170BQ5T4T1 132 aa2.9□□□□□ -1.95
CDH13-211ENST00000568770 MIR7-3HGQ8N6C7 128 aa2.9□□□□□ -1.95
CDH13-211ENST00000568770 ST20-AS1Q8NBB2 130 aa2.9□□□□□ -1.95
CDH13-211ENST00000568770 C11orf86A6NJI1 115 aa2.89□□□□□ -1.95
CDH13-211ENST00000568770 H7C2G1 150 aa2.89□□□□□ -1.95
CDH13-211ENST00000568770 DDTP30046 118 aa2.89□□□□□ -1.95
CDH13-211ENST00000568770 E9PLD3 99 aa2.88□□□□□ -1.95
CDH13-211ENST00000568770 MT-ND4LP03901 98 aa2.88□□□□□ -1.95
CDH13-211ENST00000568770 KRTAP12-2P59991 146 aa2.88□□□□□ -1.95
CDH13-211ENST00000568770 JOSD1Q15040 202 aaPredicted RBP2.88□□□□□ -1.95
CDH13-211ENST00000568770 MEIG1Q5JSS6 88 aa2.88□□□□□ -1.95
CDH13-211ENST00000568770 SMCO4Q9NRQ5 59 aa2.88□□□□□ -1.95
CDH13-211ENST00000568770 CHTOPQ9Y3Y2 248 aaKnown RBP2.88□□□□□ -1.95
CDH13-211ENST00000568770 A0A096LNJ9 63 aa2.87□□□□□ -1.95
CDH13-211ENST00000568770 MT2AP02795 61 aa2.87□□□□□ -1.95
CDH13-211ENST00000568770 C1orf195Q5TG92 126 aa2.87□□□□□ -1.95
CDH13-211ENST00000568770 FA2HQ7L5A8 372 aa2.87□□□□□ -1.95
CDH13-211ENST00000568770 TRAV23DV6A0A075B6W5 121 aa2.86□□□□□ -1.95
CDH13-211ENST00000568770 TRBV10-2A0A0K0K1G8 114 aa2.86□□□□□ -1.95
CDH13-211ENST00000568770 TMEM223A0PJW6 202 aa2.86□□□□□ -1.95
CDH13-211ENST00000568770 SERF1AO75920 110 aa2.86□□□□□ -1.95
CDH13-211ENST00000568770 SPRR1BP22528 89 aa2.86□□□□□ -1.95
CDH13-211ENST00000568770 CD164Q04900 197 aa2.86□□□□□ -1.95
CDH13-211ENST00000568770 S100A7L2Q5SY68 101 aa2.86□□□□□ -1.95
CDH13-211ENST00000568770 SLC25A34Q6PIV7 304 aa2.86□□□□□ -1.95
CDH13-211ENST00000568770 BAGE3Q86Y29 109 aa2.86□□□□□ -1.95
CDH13-211ENST00000568770 LOC107984156A0A0G2JMH3 177 aa2.85□□□□□ -1.95
CDH13-211ENST00000568770 ZNF73O43830 326 aaPredicted RBP2.85□□□□□ -1.95
CDH13-211ENST00000568770 MT1FP04733 61 aa2.85□□□□□ -1.95
CDH13-211ENST00000568770 PMCHL1Q16048 86 aa2.85□□□□□ -1.95
CDH13-211ENST00000568770 Q5XG85 94 aa2.85□□□□□ -1.95
CDH13-211ENST00000568770 ARL17AQ8IVW1 177 aa2.85□□□□□ -1.95
CDH13-211ENST00000568770 MAP1LC3CQ9BXW4 147 aa2.85□□□□□ -1.95
CDH13-211ENST00000568770 SPANXB1Q9NS25 103 aaPredicted RBP2.85□□□□□ -1.95
CDH13-211ENST00000568770 LAMTOR3Q9UHA4 124 aa2.85□□□□□ -1.95
CDH13-211ENST00000568770 NEBP20929 6669 aa2.85□□□□□ -1.95
CDH13-211ENST00000568770 C20orf202A1L168 122 aa2.84□□□□□ -1.95
CDH13-211ENST00000568770 LINC00587B1AMM8 73 aa2.84□□□□□ -1.95
CDH13-211ENST00000568770 HBDP02042 147 aa2.84□□□□□ -1.95
CDH13-211ENST00000568770 KRTAP10-10P60014 251 aa2.84□□□□□ -1.95
CDH13-211ENST00000568770 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.95
CDH13-211ENST00000568770 ATP11AUNQ6ZP68 121 aa2.84□□□□□ -1.95
CDH13-211ENST00000568770 PRO1933Q9H354 126 aa2.84□□□□□ -1.95
CDH13-211ENST00000568770 LINC00846Q9NV44 126 aa2.84□□□□□ -1.95
CDH13-211ENST00000568770 A0A0G2JQZ4 141 aa2.83□□□□□ -1.96
CDH13-211ENST00000568770 MYMXA0A1B0GTQ4 84 aa2.83□□□□□ -1.96
CDH13-211ENST00000568770 NDUFC2O95298 119 aa2.82□□□□□ -1.96
CDH13-211ENST00000568770 LINC00614P0C842 121 aa2.82□□□□□ -1.96
CDH13-211ENST00000568770 HINT1P49773 126 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms