RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 FAM236DA0A1B0GTK5 79 aa5.93□□□□□ -1.46
HDGFL3-206ENST00000568294 FAM236CP0DP71 79 aa5.93□□□□□ -1.46
HDGFL3-206ENST00000568294 VPREB1P12018 145 aa5.93□□□□□ -1.46
HDGFL3-206ENST00000568294 CASC10Q5T4H9 136 aa5.93□□□□□ -1.46
HDGFL3-206ENST00000568294 SERTAD4-AS1Q5TG53 156 aa5.93□□□□□ -1.46
HDGFL3-206ENST00000568294 ATP5EP2Q5VTU8 51 aa5.93□□□□□ -1.46
HDGFL3-206ENST00000568294 PRR34Q9NV39 138 aa5.93□□□□□ -1.46
HDGFL3-206ENST00000568294 NREPQ16612 68 aa5.93□□□□□ -1.46
HDGFL3-206ENST00000568294 C15orf56Q8N910 161 aa5.93□□□□□ -1.46
HDGFL3-206ENST00000568294 KRTAP10-11P60412 298 aa5.92□□□□□ -1.46
HDGFL3-206ENST00000568294 IGKV2-24A0A0C4DH68 120 aa5.92□□□□□ -1.46
HDGFL3-206ENST00000568294 SYCNQ0VAF6 134 aa5.92□□□□□ -1.46
HDGFL3-206ENST00000568294 DEFB116Q30KQ4 102 aa5.92□□□□□ -1.46
HDGFL3-206ENST00000568294 ST20-AS1Q8NBB2 130 aa5.92□□□□□ -1.46
HDGFL3-206ENST00000568294 M0R378 163 aa5.92□□□□□ -1.46
HDGFL3-206ENST00000568294 NDUFC2-KCTD14E9PQ53 114 aa5.91□□□□□ -1.46
HDGFL3-206ENST00000568294 ELOF1P60002 83 aaKnown RBP5.91□□□□□ -1.46
HDGFL3-206ENST00000568294 C11orf45Q8TAV5 145 aa5.91□□□□□ -1.46
HDGFL3-206ENST00000568294 UBE2BP63146 152 aa5.9□□□□□ -1.46
HDGFL3-206ENST00000568294 KMT2BQ9UMN6 2715 aaPredicted RBP5.9□□□□□ -1.46
HDGFL3-206ENST00000568294 FAM30AQ9NZY2 134 aa5.9□□□□□ -1.46
HDGFL3-206ENST00000568294 J3QL48 77 aa5.9□□□□□ -1.47
HDGFL3-206ENST00000568294 C7orf33Q8WU49 177 aa5.9□□□□□ -1.47
HDGFL3-206ENST00000568294 LOC110117498A0A087WWA1 95 aa5.89□□□□□ -1.47
HDGFL3-206ENST00000568294 PRR4Q16378 134 aa5.89□□□□□ -1.47
HDGFL3-206ENST00000568294 LRCOL1A6NCL2 159 aa5.89□□□□□ -1.47
HDGFL3-206ENST00000568294 EGFEM1PQ0D2K5 195 aa5.89□□□□□ -1.47
HDGFL3-206ENST00000568294 ETDCA0A1B0GVM5 59 aa5.89□□□□□ -1.47
HDGFL3-206ENST00000568294 MPLKIPQ8TAP9 179 aa5.89□□□□□ -1.47
HDGFL3-206ENST00000568294 TRAV7A0A075B6U4 112 aa5.88□□□□□ -1.47
HDGFL3-206ENST00000568294 A0A096LNI7 61 aa5.88□□□□□ -1.47
HDGFL3-206ENST00000568294 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.87□□□□□ -1.47
HDGFL3-206ENST00000568294 H7BZZ5 65 aa5.87□□□□□ -1.47
HDGFL3-206ENST00000568294 LINC00528Q8N1L1 170 aa5.87□□□□□ -1.47
HDGFL3-206ENST00000568294 TRBV7-4A0A0J9YYF1 115 aa5.86□□□□□ -1.47
HDGFL3-206ENST00000568294 LINC00474Q9P2X8 69 aa5.86□□□□□ -1.47
HDGFL3-206ENST00000568294 C5orf47Q569G3 176 aa5.86□□□□□ -1.47
HDGFL3-206ENST00000568294 ANK2Q01484 3957 aa5.86□□□□□ -1.47
HDGFL3-206ENST00000568294 HIGD2AQ9BW72 106 aa5.85□□□□□ -1.47
HDGFL3-206ENST00000568294 GVQW2A0A096LPI5 108 aaPredicted RBP5.85□□□□□ -1.47
HDGFL3-206ENST00000568294 ERC2-IT1O76042 136 aa5.84□□□□□ -1.47
HDGFL3-206ENST00000568294 PDE6GP18545 87 aa5.84□□□□□ -1.47
HDGFL3-206ENST00000568294 PRLHP81277 87 aa5.84□□□□□ -1.47
HDGFL3-206ENST00000568294 Q8N377 158 aa5.84□□□□□ -1.47
HDGFL3-206ENST00000568294 SMIM29Q86T20 159 aa5.84□□□□□ -1.47
HDGFL3-206ENST00000568294 FUSP35637 526 aaKnown RBP eCLIP5.84□□□□□ -1.48
HDGFL3-206ENST00000568294 TMEM254Q8TBM7 123 aa5.84□□□□□ -1.48
HDGFL3-206ENST00000568294 KRTAP26-1Q6PEX3 210 aa5.83□□□□□ -1.48
HDGFL3-206ENST00000568294 STAB2Q8WWQ8 2551 aa5.83□□□□□ -1.48
HDGFL3-206ENST00000568294 SRRM2Q9UQ35 2752 aaKnown RBP5.83□□□□□ -1.48
HDGFL3-206ENST00000568294 CXCL6P80162 114 aa5.83□□□□□ -1.48
HDGFL3-206ENST00000568294 C1orf137Q5JT78 98 aa5.83□□□□□ -1.48
HDGFL3-206ENST00000568294 TENM2Q9NT68 2774 aa5.83□□□□□ -1.48
HDGFL3-206ENST00000568294 Q5XG85 94 aa5.82□□□□□ -1.48
HDGFL3-206ENST00000568294 WFDC13Q8IUB5 93 aa5.82□□□□□ -1.48
HDGFL3-206ENST00000568294 IGKV4-1P06312 121 aa5.81□□□□□ -1.48
HDGFL3-206ENST00000568294 Q9BRP9 147 aa5.81□□□□□ -1.48
HDGFL3-206ENST00000568294 LINC00588Q9Y4M8 146 aa5.81□□□□□ -1.48
HDGFL3-206ENST00000568294 H3BS24 57 aa5.81□□□□□ -1.48
HDGFL3-206ENST00000568294 PSCAO43653 123 aa5.81□□□□□ -1.48
HDGFL3-206ENST00000568294 RPS28P62857 69 aaKnown RBP5.81□□□□□ -1.48
HDGFL3-206ENST00000568294 KRTAP24-1Q3LI83 254 aa5.81□□□□□ -1.48
HDGFL3-206ENST00000568294 LINC01556Q5JQF7 62 aa5.8□□□□□ -1.48
HDGFL3-206ENST00000568294 TRBV7-6A0A0J9YX20 115 aa5.8□□□□□ -1.48
HDGFL3-206ENST00000568294 A0A1W2PNM2 257 aa5.8□□□□□ -1.48
HDGFL3-206ENST00000568294 A0A0U1RQV1 116 aa5.79□□□□□ -1.48
HDGFL3-206ENST00000568294 CHTF8P0CG12 524 aa5.79□□□□□ -1.48
HDGFL3-206ENST00000568294 FAM229BQ4G0N7 80 aa5.78□□□□□ -1.48
HDGFL3-206ENST00000568294 Q6ZRX8 168 aa5.78□□□□□ -1.48
HDGFL3-206ENST00000568294 K7EQZ3 153 aa5.78□□□□□ -1.48
HDGFL3-206ENST00000568294 RPL37AP61513 92 aaKnown RBP5.78□□□□□ -1.48
HDGFL3-206ENST00000568294 PKIGQ9Y2B9 76 aa5.78□□□□□ -1.48
HDGFL3-206ENST00000568294 SERP1Q9Y6X1 66 aa5.78□□□□□ -1.48
HDGFL3-206ENST00000568294 MRPL55Q7Z7F7 128 aaKnown RBP5.78□□□□□ -1.48
HDGFL3-206ENST00000568294 BRK1Q8WUW1 75 aa5.78□□□□□ -1.48
HDGFL3-206ENST00000568294 PRYO14603 147 aa5.77□□□□□ -1.49
HDGFL3-206ENST00000568294 KLKP1Q107X0 134 aa5.77□□□□□ -1.49
HDGFL3-206ENST00000568294 PLA2G2DQ9UNK4 145 aa5.77□□□□□ -1.49
HDGFL3-206ENST00000568294 A0A0A0MQY5 61 aa5.77□□□□□ -1.49
HDGFL3-206ENST00000568294 LINC00336Q6ZUF6 198 aa5.77□□□□□ -1.49
HDGFL3-206ENST00000568294 UBE2DNLQ8IWF7 75 aa5.77□□□□□ -1.49
HDGFL3-206ENST00000568294 KCNQ1DNQ9H478 68 aa5.76□□□□□ -1.49
HDGFL3-206ENST00000568294 A0A087WSZ3 146 aa5.76□□□□□ -1.49
HDGFL3-206ENST00000568294 COL7A1Q02388 2944 aa5.76□□□□□ -1.49
HDGFL3-206ENST00000568294 H3BQ85 93 aa5.75□□□□□ -1.49
HDGFL3-206ENST00000568294 V9GYY9 64 aa5.75□□□□□ -1.49
HDGFL3-206ENST00000568294 WIPF1O43516 503 aa5.75□□□□□ -1.49
HDGFL3-206ENST00000568294 KRTAP7-1Q8IUC3 87 aa5.75□□□□□ -1.49
HDGFL3-206ENST00000568294 IGLV1-50A0A075B6I6 118 aa5.75□□□□□ -1.49
HDGFL3-206ENST00000568294 FP248Q71RG6 208 aaPredicted RBP5.75□□□□□ -1.49
HDGFL3-206ENST00000568294 LINC00476Q8WZB0 136 aa5.75□□□□□ -1.49
HDGFL3-206ENST00000568294 DHRS4-AS1Q9P1J3 65 aa5.75□□□□□ -1.49
HDGFL3-206ENST00000568294 LYSTQ99698 3801 aa5.74□□□□□ -1.49
HDGFL3-206ENST00000568294 REG3GQ6UW15 175 aa5.74□□□□□ -1.49
HDGFL3-206ENST00000568294 DNAH10Q8IVF4 4471 aa5.73□□□□□ -1.49
HDGFL3-206ENST00000568294 DNAH10OSP0CZ25 163 aa5.72□□□□□ -1.49
HDGFL3-206ENST00000568294 PHF5AQ7RTV0 110 aaKnown RBP5.72□□□□□ -1.49
HDGFL3-206ENST00000568294 Q8NBF4 154 aa5.72□□□□□ -1.49
HDGFL3-206ENST00000568294 OCR1Q9BZK8 76 aa5.72□□□□□ -1.49
HDGFL3-206ENST00000568294 UBE2AP49459 152 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 460.6 ms