RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 DDTP30046 118 aa5.57□□□□□ -1.52
SF3B3-211ENST00000568291 PRR4Q16378 134 aa5.57□□□□□ -1.52
SF3B3-211ENST00000568291 C3orf22Q8N5N4 141 aa5.57□□□□□ -1.52
SF3B3-211ENST00000568291 LITAFQ99732 161 aa5.57□□□□□ -1.52
SF3B3-211ENST00000568291 MIEN1Q9BRT3 115 aa5.57□□□□□ -1.52
SF3B3-211ENST00000568291 PPDPFQ9H3Y8 114 aa5.57□□□□□ -1.52
SF3B3-211ENST00000568291 KCNQ1DNQ9H478 68 aa5.57□□□□□ -1.52
SF3B3-211ENST00000568291 LOC107984156A0A0G2JMH3 177 aa5.56□□□□□ -1.52
SF3B3-211ENST00000568291 ETDCA0A1B0GVM5 59 aa5.56□□□□□ -1.52
SF3B3-211ENST00000568291 PRYO14603 147 aa5.56□□□□□ -1.52
SF3B3-211ENST00000568291 ARL17AQ8IVW1 177 aa5.56□□□□□ -1.52
SF3B3-211ENST00000568291 SMCR5Q8TEV8 140 aa5.56□□□□□ -1.52
SF3B3-211ENST00000568291 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-211ENST00000568291 ERC2-IT1O76042 136 aa5.55□□□□□ -1.52
SF3B3-211ENST00000568291 SPRR1AP35321 89 aa5.55□□□□□ -1.52
SF3B3-211ENST00000568291 S100A7L2Q5SY68 101 aa5.55□□□□□ -1.52
SF3B3-211ENST00000568291 HIST3H2BBQ8N257 126 aa5.55□□□□□ -1.52
SF3B3-211ENST00000568291 LINC00308Q8TCZ7 52 aa5.55□□□□□ -1.52
SF3B3-211ENST00000568291 TMA7Q9Y2S6 64 aaKnown RBP5.55□□□□□ -1.52
SF3B3-211ENST00000568291 B5MCH6 92 aa5.54□□□□□ -1.52
SF3B3-211ENST00000568291 PCP2Q8IVA1 136 aa5.54□□□□□ -1.52
SF3B3-211ENST00000568291 SPRR4Q96PI1 79 aa5.54□□□□□ -1.52
SF3B3-211ENST00000568291 RETNLBQ9BQ08 111 aa5.54□□□□□ -1.52
SF3B3-211ENST00000568291 SPANXB1Q9NS25 103 aaPredicted RBP5.54□□□□□ -1.52
SF3B3-211ENST00000568291 TRBV10-2A0A0K0K1G8 114 aa5.53□□□□□ -1.52
SF3B3-211ENST00000568291 A0A0U1RQV1 116 aa5.53□□□□□ -1.52
SF3B3-211ENST00000568291 C20orf202A1L168 122 aa5.53□□□□□ -1.52
SF3B3-211ENST00000568291 LINC00337Q8N6G1 96 aa5.53□□□□□ -1.52
SF3B3-211ENST00000568291 OR13C6PQ8NH95 151 aa5.53□□□□□ -1.52
SF3B3-211ENST00000568291 HIST1H2BLQ99880 126 aa5.53□□□□□ -1.52
SF3B3-211ENST00000568291 Q9BRP9 147 aa5.53□□□□□ -1.52
SF3B3-211ENST00000568291 NDUFC2O95298 119 aa5.52□□□□□ -1.53
SF3B3-211ENST00000568291 IGLV6-57P01721 117 aa5.52□□□□□ -1.53
SF3B3-211ENST00000568291 S100A2P29034 98 aa5.52□□□□□ -1.53
SF3B3-211ENST00000568291 SNRPEP62304 92 aaKnown RBP5.52□□□□□ -1.53
SF3B3-211ENST00000568291 FAM229BQ4G0N7 80 aa5.52□□□□□ -1.53
SF3B3-211ENST00000568291 GAGE2AQ6NT46 116 aa5.52□□□□□ -1.53
SF3B3-211ENST00000568291 SCGB1D4Q6XE38 83 aa5.52□□□□□ -1.53
SF3B3-211ENST00000568291 TRAV23DV6A0A075B6W5 121 aa5.51□□□□□ -1.53
SF3B3-211ENST00000568291 LINC00304Q8N9R0 145 aa5.51□□□□□ -1.53
SF3B3-211ENST00000568291 ZNF73O43830 326 aaPredicted RBP5.5□□□□□ -1.53
SF3B3-211ENST00000568291 TIMM17BO60830 172 aa5.5□□□□□ -1.53
SF3B3-211ENST00000568291 S100A12P80511 92 aa5.5□□□□□ -1.53
SF3B3-211ENST00000568291 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
SF3B3-211ENST00000568291 S100A6P06703 90 aa5.49□□□□□ -1.53
SF3B3-211ENST00000568291 Q6ZRX8 168 aa5.49□□□□□ -1.53
SF3B3-211ENST00000568291 MUSTN1Q8IVN3 82 aa5.49□□□□□ -1.53
SF3B3-211ENST00000568291 SPANXCQ9NY87 97 aa5.49□□□□□ -1.53
SF3B3-211ENST00000568291 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
SF3B3-211ENST00000568291 Q8NBF4 154 aa5.47□□□□□ -1.53
SF3B3-211ENST00000568291 ZNF706Q9Y5V0 76 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-211ENST00000568291 SCGB1D1O95968 90 aa5.46□□□□□ -1.54
SF3B3-211ENST00000568291 MOBPQ13875 183 aa5.46□□□□□ -1.54
SF3B3-211ENST00000568291 SPANXDQ9BXN6 97 aa5.46□□□□□ -1.54
SF3B3-211ENST00000568291 A6NDN8 102 aa5.45□□□□□ -1.54
SF3B3-211ENST00000568291 C6orf99Q4VX62 202 aa5.45□□□□□ -1.54
SF3B3-211ENST00000568291 LINC00483Q53H64 154 aa5.45□□□□□ -1.54
SF3B3-211ENST00000568291 MUC2Q02817 5179 aa5.44□□□□□ -1.54
SF3B3-211ENST00000568291 C5orf52A6NGY3 159 aa5.44□□□□□ -1.54
SF3B3-211ENST00000568291 CDIP1Q9H305 208 aa5.44□□□□□ -1.54
SF3B3-211ENST00000568291 HSBP1L1C9JCN9 74 aa5.43□□□□□ -1.54
SF3B3-211ENST00000568291 COX7BP24311 80 aa5.43□□□□□ -1.54
SF3B3-211ENST00000568291 HINT1P49773 126 aaPredicted RBP5.43□□□□□ -1.54
SF3B3-211ENST00000568291 JOSD1Q15040 202 aaPredicted RBP5.43□□□□□ -1.54
SF3B3-211ENST00000568291 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
SF3B3-211ENST00000568291 LINC00518Q8N0U6 118 aa5.43□□□□□ -1.54
SF3B3-211ENST00000568291 DEFB105AQ8NG35 78 aa5.43□□□□□ -1.54
SF3B3-211ENST00000568291 IFITM1P13164 125 aa5.42□□□□□ -1.54
SF3B3-211ENST00000568291 C21orf62-AS1Q17RA5 79 aa5.42□□□□□ -1.54
SF3B3-211ENST00000568291 IGLV7-46A0A075B6I9 117 aa5.41□□□□□ -1.54
SF3B3-211ENST00000568291 C9orf153Q5TBE3 101 aa5.41□□□□□ -1.54
SF3B3-211ENST00000568291 C12orf57Q99622 126 aa5.41□□□□□ -1.54
SF3B3-211ENST00000568291 AKR1D1P51857 326 aa5.4□□□□□ -1.54
SF3B3-211ENST00000568291 ELOF1P60002 83 aaKnown RBP5.4□□□□□ -1.54
SF3B3-211ENST00000568291 HRCT1Q6UXD1 115 aa5.4□□□□□ -1.54
SF3B3-211ENST00000568291 SMIM11BQ8TCY0 68 aa5.4□□□□□ -1.54
SF3B3-211ENST00000568291 C14orf144Q96I85 54 aa5.4□□□□□ -1.54
SF3B3-211ENST00000568291 A0A0G2JQZ4 141 aa5.39□□□□□ -1.55
SF3B3-211ENST00000568291 A4D1N5 150 aa5.39□□□□□ -1.55
SF3B3-211ENST00000568291 Q1RN00 199 aa5.39□□□□□ -1.55
SF3B3-211ENST00000568291 SPAG11AQ6PDA7 123 aa5.39□□□□□ -1.55
SF3B3-211ENST00000568291 Q6ZVH6 145 aa5.39□□□□□ -1.55
SF3B3-211ENST00000568291 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
SF3B3-211ENST00000568291 DHRS4-AS1Q9P1J3 65 aa5.39□□□□□ -1.55
SF3B3-211ENST00000568291 TAL2Q16559 108 aa5.38□□□□□ -1.55
SF3B3-211ENST00000568291 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
SF3B3-211ENST00000568291 SSBP3-AS1Q7Z2R9 100 aa5.38□□□□□ -1.55
SF3B3-211ENST00000568291 PAM16Q9Y3D7 125 aa5.38□□□□□ -1.55
SF3B3-211ENST00000568291 CBY1Q9Y3M2 126 aa5.38□□□□□ -1.55
SF3B3-211ENST00000568291 FAT4Q6V0I7 4981 aa5.37□□□□□ -1.55
SF3B3-211ENST00000568291 COPS9Q8WXC6 57 aa5.37□□□□□ -1.55
SF3B3-211ENST00000568291 HIST1H4GQ99525 98 aa5.37□□□□□ -1.55
SF3B3-211ENST00000568291 TRAV13-2A0A0B4J235 113 aa5.36□□□□□ -1.55
SF3B3-211ENST00000568291 SPINK1P00995 79 aa5.36□□□□□ -1.55
SF3B3-211ENST00000568291 COX8AP10176 69 aa5.36□□□□□ -1.55
SF3B3-211ENST00000568291 SPATA45Q537H7 98 aa5.36□□□□□ -1.55
SF3B3-211ENST00000568291 A0A1B0GWB2 263 aa5.35□□□□□ -1.55
SF3B3-211ENST00000568291 SPRR1BP22528 89 aa5.35□□□□□ -1.55
SF3B3-211ENST00000568291 LINC01547P58512 204 aaPredicted RBP5.35□□□□□ -1.55
SF3B3-211ENST00000568291 Q8N377 158 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms