RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 IL17DQ8TAD2 202 aa7.35□□□□□ -1.23
PALB2-206ENST00000568219 IGSF10Q6WRI0 2623 aa7.35□□□□□ -1.23
PALB2-206ENST00000568219 IGLV6-57P01721 117 aa7.35□□□□□ -1.23
PALB2-206ENST00000568219 RETNQ9HD89 108 aa7.35□□□□□ -1.23
PALB2-206ENST00000568219 CSMD2Q7Z408 3487 aa7.34□□□□□ -1.23
PALB2-206ENST00000568219 A6NED7 52 aa7.34□□□□□ -1.23
PALB2-206ENST00000568219 FLNBO75369 2602 aaKnown RBP7.34□□□□□ -1.23
PALB2-206ENST00000568219 MRPL55Q7Z7F7 128 aaKnown RBP7.34□□□□□ -1.24
PALB2-206ENST00000568219 ZFHX3Q15911 3703 aa7.33□□□□□ -1.24
PALB2-206ENST00000568219 C9orf66Q5T8R8 295 aa7.33□□□□□ -1.24
PALB2-206ENST00000568219 LINC00167Q96N53 147 aa7.33□□□□□ -1.24
PALB2-206ENST00000568219 PSCAO43653 123 aa7.33□□□□□ -1.24
PALB2-206ENST00000568219 ELOF1P60002 83 aaKnown RBP7.33□□□□□ -1.24
PALB2-206ENST00000568219 CSNK1G2-AS1Q8NCQ2 148 aa7.33□□□□□ -1.24
PALB2-206ENST00000568219 MGAM2Q2M2H8 2515 aa7.32□□□□□ -1.24
PALB2-206ENST00000568219 EGFEM1PQ0D2K5 195 aa7.32□□□□□ -1.24
PALB2-206ENST00000568219 A0A0G2JQZ4 141 aa7.32□□□□□ -1.24
PALB2-206ENST00000568219 A0A1W2PNN7 141 aa7.32□□□□□ -1.24
PALB2-206ENST00000568219 SMR3AQ99954 134 aa7.32□□□□□ -1.24
PALB2-206ENST00000568219 X6R8D5 127 aa7.32□□□□□ -1.24
PALB2-206ENST00000568219 PRR15LQ9BU68 103 aa7.31□□□□□ -1.24
PALB2-206ENST00000568219 TRBV7-4A0A0J9YYF1 115 aa7.31□□□□□ -1.24
PALB2-206ENST00000568219 HIVEP1P15822 2718 aa7.31□□□□□ -1.24
PALB2-206ENST00000568219 COL6A5A8TX70 2615 aa7.31□□□□□ -1.24
PALB2-206ENST00000568219 NBEAL1Q6ZS30 2694 aa7.31□□□□□ -1.24
PALB2-206ENST00000568219 ST20-AS1Q8NBB2 130 aa7.31□□□□□ -1.24
PALB2-206ENST00000568219 A8MUN3 132 aa7.3□□□□□ -1.24
PALB2-206ENST00000568219 IGKV4-1P06312 121 aa7.3□□□□□ -1.24
PALB2-206ENST00000568219 IGHV4-30-4P0DP06 118 aa7.3□□□□□ -1.24
PALB2-206ENST00000568219 C1orf64Q8NEQ6 169 aa7.3□□□□□ -1.24
PALB2-206ENST00000568219 A0A087WSZ3 146 aa7.29□□□□□ -1.24
PALB2-206ENST00000568219 C7orf33Q8WU49 177 aa7.27□□□□□ -1.24
PALB2-206ENST00000568219 DHRS4-AS1Q9P1J3 65 aa7.27□□□□□ -1.24
PALB2-206ENST00000568219 C19orf73Q9NVV2 129 aa7.27□□□□□ -1.25
PALB2-206ENST00000568219 BSNQ9UPA5 3926 aa7.27□□□□□ -1.25
PALB2-206ENST00000568219 VPREB1P12018 145 aa7.27□□□□□ -1.25
PALB2-206ENST00000568219 HELZ2Q9BYK8 2649 aaKnown RBP7.27□□□□□ -1.25
PALB2-206ENST00000568219 K7EQZ3 153 aa7.27□□□□□ -1.25
PALB2-206ENST00000568219 CDK2AP2O75956 126 aa7.26□□□□□ -1.25
PALB2-206ENST00000568219 UBE2AP49459 152 aa7.26□□□□□ -1.25
PALB2-206ENST00000568219 PCOTHQ58A44 107 aa7.26□□□□□ -1.25
PALB2-206ENST00000568219 NDUFB1O75438 58 aa7.26□□□□□ -1.25
PALB2-206ENST00000568219 Q6ZRP5 223 aa7.26□□□□□ -1.25
PALB2-206ENST00000568219 Q6ZTC4 211 aa7.26□□□□□ -1.25
PALB2-206ENST00000568219 HCG22E2RYF7 251 aa7.25□□□□□ -1.25
PALB2-206ENST00000568219 RPL37AP61513 92 aaKnown RBP7.25□□□□□ -1.25
PALB2-206ENST00000568219 DEFB131BA0A096LNP1 70 aa7.25□□□□□ -1.25
PALB2-206ENST00000568219 LINC00528Q8N1L1 170 aa7.24□□□□□ -1.25
PALB2-206ENST00000568219 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.24□□□□□ -1.25
PALB2-206ENST00000568219 EPM2AB3EWF7 344 aa7.24□□□□□ -1.25
PALB2-206ENST00000568219 MAST4O15021 2626 aa7.24□□□□□ -1.25
PALB2-206ENST00000568219 FSHBP01225 129 aa7.24□□□□□ -1.25
PALB2-206ENST00000568219 PRLHP81277 87 aa7.23□□□□□ -1.25
PALB2-206ENST00000568219 OCR1Q9BZK8 76 aa7.23□□□□□ -1.25
PALB2-206ENST00000568219 Q8N377 158 aa7.23□□□□□ -1.25
PALB2-206ENST00000568219 B9D2Q9BPU9 175 aa7.23□□□□□ -1.25
PALB2-206ENST00000568219 TRAV22A0A0B4J277 110 aa7.22□□□□□ -1.25
PALB2-206ENST00000568219 FAM168BA1KXE4 195 aa7.22□□□□□ -1.25
PALB2-206ENST00000568219 F8WDY8 70 aa7.22□□□□□ -1.25
PALB2-206ENST00000568219 OXLD1Q5BKU9 147 aa7.22□□□□□ -1.25
PALB2-206ENST00000568219 H0Y9P7 68 aa7.22□□□□□ -1.25
PALB2-206ENST00000568219 SERTAD4-AS1Q5TG53 156 aa7.21□□□□□ -1.25
PALB2-206ENST00000568219 ERC2-IT1O76042 136 aa7.2□□□□□ -1.26
PALB2-206ENST00000568219 CASC2Q6XLA1 102 aa7.2□□□□□ -1.26
PALB2-206ENST00000568219 C11orf45Q8TAV5 145 aa7.2□□□□□ -1.26
PALB2-206ENST00000568219 UBE2DNLQ8IWF7 75 aa7.2□□□□□ -1.26
PALB2-206ENST00000568219 Q8NBF4 154 aa7.2□□□□□ -1.26
PALB2-206ENST00000568219 ITPR2Q14571 2701 aa7.2□□□□□ -1.26
PALB2-206ENST00000568219 C16orf95Q9H693 158 aa7.2□□□□□ -1.26
PALB2-206ENST00000568219 A0A1W2PNM2 257 aa7.18□□□□□ -1.26
PALB2-206ENST00000568219 hDV103S1A0JD37 113 aa7.18□□□□□ -1.26
PALB2-206ENST00000568219 INAFM1C9JVW0 142 aa7.18□□□□□ -1.26
PALB2-206ENST00000568219 Q6ZRX8 168 aa7.17□□□□□ -1.26
PALB2-206ENST00000568219 LINC00476Q8WZB0 136 aa7.17□□□□□ -1.26
PALB2-206ENST00000568219 SPAG11AQ6PDA7 123 aa7.16□□□□□ -1.26
PALB2-206ENST00000568219 GVQW2A0A096LPI5 108 aaPredicted RBP7.16□□□□□ -1.26
PALB2-206ENST00000568219 VPS13CQ709C8 3753 aa7.16□□□□□ -1.26
PALB2-206ENST00000568219 REG3GQ6UW15 175 aa7.15□□□□□ -1.26
PALB2-206ENST00000568219 PRR34Q9NV39 138 aa7.15□□□□□ -1.26
PALB2-206ENST00000568219 Q8NAQ8 132 aa7.15□□□□□ -1.27
PALB2-206ENST00000568219 Q9BRP9 147 aa7.14□□□□□ -1.27
PALB2-206ENST00000568219 IGLV9-49A0A0B4J1Y8 123 aa7.14□□□□□ -1.27
PALB2-206ENST00000568219 SPINK6Q6UWN8 80 aa7.12□□□□□ -1.27
PALB2-206ENST00000568219 LINC00612Q8N6U2 182 aa7.12□□□□□ -1.27
PALB2-206ENST00000568219 C15orf56Q8N910 161 aa7.12□□□□□ -1.27
PALB2-206ENST00000568219 STAB1Q9NY15 2570 aa7.11□□□□□ -1.27
PALB2-206ENST00000568219 KCNQ1DNQ9H478 68 aa7.1□□□□□ -1.27
PALB2-206ENST00000568219 LIMD2Q9BT23 127 aa7.1□□□□□ -1.27
PALB2-206ENST00000568219 PDZD2O15018 2839 aa7.1□□□□□ -1.27
PALB2-206ENST00000568219 DSCR10P59022 87 aa7.1□□□□□ -1.27
PALB2-206ENST00000568219 NSD1Q96L73 2696 aaPredicted RBP7.09□□□□□ -1.27
PALB2-206ENST00000568219 IGHV6-1A0A0B4J1U7 121 aa7.08□□□□□ -1.28
PALB2-206ENST00000568219 PRR15Q8IV56 129 aa7.07□□□□□ -1.28
PALB2-206ENST00000568219 KRTAP10-3P60369 221 aa7.07□□□□□ -1.28
PALB2-206ENST00000568219 IGFL1Q6UW32 110 aa7.06□□□□□ -1.28
PALB2-206ENST00000568219 IGLV5-48A0A075B6I7 105 aa7.06□□□□□ -1.28
PALB2-206ENST00000568219 A8MU10 97 aa7.05□□□□□ -1.28
PALB2-206ENST00000568219 Q1T7F1 81 aa7.05□□□□□ -1.28
PALB2-206ENST00000568219 IGLV1-50A0A075B6I6 118 aa7.05□□□□□ -1.28
PALB2-206ENST00000568219 CASC10Q5T4H9 136 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms