RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 NDUFC2O95298 119 aa7.78□□□□□ -1.16
CNOT1-213ENST00000568158 SCGB1D1O95968 90 aa7.78□□□□□ -1.16
CNOT1-213ENST00000568158 KCNQ1DNQ9H478 68 aa7.78□□□□□ -1.16
CNOT1-213ENST00000568158 TRBV10-2A0A0K0K1G8 114 aa7.77□□□□□ -1.17
CNOT1-213ENST00000568158 DDTP30046 118 aa7.77□□□□□ -1.17
CNOT1-213ENST00000568158 SCGB1D4Q6XE38 83 aa7.77□□□□□ -1.17
CNOT1-213ENST00000568158 KRTAP4-9Q9BYQ8 210 aa7.77□□□□□ -1.17
CNOT1-213ENST00000568158 ANAPC11Q9NYG5 84 aa7.77□□□□□ -1.17
CNOT1-213ENST00000568158 PRYO14603 147 aa7.76□□□□□ -1.17
CNOT1-213ENST00000568158 SPANXB1Q9NS25 103 aaPredicted RBP7.76□□□□□ -1.17
CNOT1-213ENST00000568158 SPRR1AP35321 89 aa7.75□□□□□ -1.17
CNOT1-213ENST00000568158 S100A7L2Q5SY68 101 aa7.75□□□□□ -1.17
CNOT1-213ENST00000568158 HSBP1L1C9JCN9 74 aa7.74□□□□□ -1.17
CNOT1-213ENST00000568158 KRTAP4-16G5E9R7 235 aaPredicted RBP7.74□□□□□ -1.17
CNOT1-213ENST00000568158 ETDCA0A1B0GVM5 59 aa7.73□□□□□ -1.17
CNOT1-213ENST00000568158 IGLV6-57P01721 117 aa7.73□□□□□ -1.17
CNOT1-213ENST00000568158 LINC00337Q8N6G1 96 aa7.73□□□□□ -1.17
CNOT1-213ENST00000568158 HIGD2AQ9BW72 106 aa7.73□□□□□ -1.17
CNOT1-213ENST00000568158 SPANXDQ9BXN6 97 aa7.73□□□□□ -1.17
CNOT1-213ENST00000568158 SPANXCQ9NY87 97 aa7.73□□□□□ -1.17
CNOT1-213ENST00000568158 MUSTN1Q8IVN3 82 aa7.72□□□□□ -1.17
CNOT1-213ENST00000568158 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
CNOT1-213ENST00000568158 SMCR5Q8TEV8 140 aa7.72□□□□□ -1.17
CNOT1-213ENST00000568158 KRTAP4-2Q9BYR5 136 aa7.72□□□□□ -1.17
CNOT1-213ENST00000568158 A0A087X002 238 aa7.71□□□□□ -1.18
CNOT1-213ENST00000568158 B5MCH6 92 aa7.71□□□□□ -1.18
CNOT1-213ENST00000568158 S100A12P80511 92 aa7.71□□□□□ -1.18
CNOT1-213ENST00000568158 TRAV23DV6A0A075B6W5 121 aa7.69□□□□□ -1.18
CNOT1-213ENST00000568158 CRYGAP11844 174 aa7.69□□□□□ -1.18
CNOT1-213ENST00000568158 IFITM1P13164 125 aa7.69□□□□□ -1.18
CNOT1-213ENST00000568158 LINC00518Q8N0U6 118 aa7.69□□□□□ -1.18
CNOT1-213ENST00000568158 RPL13AP40429 203 aaKnown RBP7.68□□□□□ -1.18
CNOT1-213ENST00000568158 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
CNOT1-213ENST00000568158 Q6ZVH6 145 aa7.68□□□□□ -1.18
CNOT1-213ENST00000568158 TMA7Q9Y2S6 64 aaKnown RBP7.68□□□□□ -1.18
CNOT1-213ENST00000568158 ERC2-IT1O76042 136 aa7.67□□□□□ -1.18
CNOT1-213ENST00000568158 JOSD1Q15040 202 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-213ENST00000568158 TYMSOSQ8TAI1 123 aa7.67□□□□□ -1.18
CNOT1-213ENST00000568158 ZNF73O43830 326 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-213ENST00000568158 SPRR4Q96PI1 79 aa7.66□□□□□ -1.18
CNOT1-213ENST00000568158 Q9BRP9 147 aa7.66□□□□□ -1.18
CNOT1-213ENST00000568158 COX8AP10176 69 aa7.65□□□□□ -1.18
CNOT1-213ENST00000568158 FAM229BQ4G0N7 80 aa7.65□□□□□ -1.18
CNOT1-213ENST00000568158 COPS9Q8WXC6 57 aa7.65□□□□□ -1.18
CNOT1-213ENST00000568158 C14orf144Q96I85 54 aa7.65□□□□□ -1.18
CNOT1-213ENST00000568158 PPDPFQ9H3Y8 114 aa7.65□□□□□ -1.18
CNOT1-213ENST00000568158 PAM16Q9Y3D7 125 aa7.65□□□□□ -1.18
CNOT1-213ENST00000568158 SPATA45Q537H7 98 aa7.64□□□□□ -1.19
CNOT1-213ENST00000568158 Q6ZRX8 168 aa7.64□□□□□ -1.19
CNOT1-213ENST00000568158 HMCN2Q8NDA2 5059 aa7.63□□□□□ -1.19
CNOT1-213ENST00000568158 A6NDN8 102 aa7.63□□□□□ -1.19
CNOT1-213ENST00000568158 C3orf22Q8N5N4 141 aa7.63□□□□□ -1.19
CNOT1-213ENST00000568158 CBY1Q9Y3M2 126 aa7.63□□□□□ -1.19
CNOT1-213ENST00000568158 TSPAN13O95857 204 aa7.62□□□□□ -1.19
CNOT1-213ENST00000568158 HINT1P49773 126 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-213ENST00000568158 GAGE2AQ6NT46 116 aa7.62□□□□□ -1.19
CNOT1-213ENST00000568158 DLEU1O43261 78 aa7.61□□□□□ -1.19
CNOT1-213ENST00000568158 C6orf99Q4VX62 202 aa7.61□□□□□ -1.19
CNOT1-213ENST00000568158 VAMP8Q9BV40 100 aa7.61□□□□□ -1.19
CNOT1-213ENST00000568158 ZNF706Q9Y5V0 76 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-213ENST00000568158 A4D1N5 150 aa7.6□□□□□ -1.19
CNOT1-213ENST00000568158 PYY3Q5JQD4 70 aa7.6□□□□□ -1.19
CNOT1-213ENST00000568158 COX7BP24311 80 aa7.59□□□□□ -1.19
CNOT1-213ENST00000568158 ST20-AS1Q8NBB2 130 aa7.59□□□□□ -1.19
CNOT1-213ENST00000568158 HIST1H4GQ99525 98 aa7.59□□□□□ -1.19
CNOT1-213ENST00000568158 TRAV13-2A0A0B4J235 113 aa7.58□□□□□ -1.2
CNOT1-213ENST00000568158 ELOF1P60002 83 aaKnown RBP7.57□□□□□ -1.2
CNOT1-213ENST00000568158 LINC00483Q53H64 154 aa7.57□□□□□ -1.2
CNOT1-213ENST00000568158 SLC25A34Q6PIV7 304 aa7.57□□□□□ -1.2
CNOT1-213ENST00000568158 SMIM11BQ8TCY0 68 aa7.57□□□□□ -1.2
CNOT1-213ENST00000568158 LINC00304Q8N9R0 145 aa7.56□□□□□ -1.2
CNOT1-213ENST00000568158 C12orf57Q99622 126 aa7.56□□□□□ -1.2
CNOT1-213ENST00000568158 C2orf91Q6ZV80 131 aa7.55□□□□□ -1.2
CNOT1-213ENST00000568158 DHRS4-AS1Q9P1J3 65 aa7.55□□□□□ -1.2
CNOT1-213ENST00000568158 HIGD1BQ9P298 99 aa7.55□□□□□ -1.2
CNOT1-213ENST00000568158 IGLV9-49A0A0B4J1Y8 123 aa7.54□□□□□ -1.2
CNOT1-213ENST00000568158 TRBV7-6A0A0J9YX20 115 aa7.54□□□□□ -1.2
CNOT1-213ENST00000568158 A0A1B0GWB2 263 aa7.52□□□□□ -1.21
CNOT1-213ENST00000568158 Q8NBF4 154 aa7.52□□□□□ -1.21
CNOT1-213ENST00000568158 CFC1BP0CG36 223 aa7.51□□□□□ -1.21
CNOT1-213ENST00000568158 CFC1P0CG37 223 aa7.51□□□□□ -1.21
CNOT1-213ENST00000568158 MOBPQ13875 183 aa7.51□□□□□ -1.21
CNOT1-213ENST00000568158 PRR4Q16378 134 aa7.51□□□□□ -1.21
CNOT1-213ENST00000568158 TAL2Q16559 108 aa7.51□□□□□ -1.21
CNOT1-213ENST00000568158 DEFB105AQ8NG35 78 aa7.51□□□□□ -1.21
CNOT1-213ENST00000568158 SSBP3-AS1Q7Z2R9 100 aa7.5□□□□□ -1.21
CNOT1-213ENST00000568158 SPRR1BP22528 89 aa7.49□□□□□ -1.21
CNOT1-213ENST00000568158 VAMP3Q15836 100 aa7.48□□□□□ -1.21
CNOT1-213ENST00000568158 SPAG11AQ6PDA7 123 aa7.48□□□□□ -1.21
CNOT1-213ENST00000568158 CEND1Q8N111 149 aa7.48□□□□□ -1.21
CNOT1-213ENST00000568158 RETNLBQ9BQ08 111 aa7.48□□□□□ -1.21
CNOT1-213ENST00000568158 H7C2G1 150 aa7.47□□□□□ -1.21
CNOT1-213ENST00000568158 C9orf153Q5TBE3 101 aa7.47□□□□□ -1.21
CNOT1-213ENST00000568158 LRP2P98164 4655 aa7.46□□□□□ -1.21
CNOT1-213ENST00000568158 LINC01547P58512 204 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-213ENST00000568158 LINC00575Q6W349 94 aa7.46□□□□□ -1.22
CNOT1-213ENST00000568158 RAB37Q96AX2 223 aa7.46□□□□□ -1.22
CNOT1-213ENST00000568158 LPAP08519 4548 aa7.46□□□□□ -1.22
CNOT1-213ENST00000568158 TEX49A0A1B0GTD5 131 aa7.45□□□□□ -1.22
CNOT1-213ENST00000568158 FXYD2P54710 66 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms