RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 HIST1H2BBP33778 126 aa6.91□□□□□ -1.3
GTF3C1-208ENST00000567843 HIST1H2BDP58876 126 aa6.91□□□□□ -1.3
GTF3C1-208ENST00000567843 HIST1H2BCP62807 126 aa6.91□□□□□ -1.3
GTF3C1-208ENST00000567843 CTAG1AP78358 180 aa6.91□□□□□ -1.3
GTF3C1-208ENST00000567843 HIST2H2BEQ16778 126 aa6.91□□□□□ -1.3
GTF3C1-208ENST00000567843 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.91□□□□□ -1.3
GTF3C1-208ENST00000567843 ST20-AS1Q8NBB2 130 aa6.91□□□□□ -1.3
GTF3C1-208ENST00000567843 HIST1H2BHQ93079 126 aa6.91□□□□□ -1.3
GTF3C1-208ENST00000567843 HIST1H2BNQ99877 126 aa6.91□□□□□ -1.3
GTF3C1-208ENST00000567843 HIST1H2BMQ99879 126 aa6.91□□□□□ -1.3
GTF3C1-208ENST00000567843 TTTY13Q9BZ97 58 aa6.9□□□□□ -1.3
GTF3C1-208ENST00000567843 ZNF73O43830 326 aaPredicted RBP6.89□□□□□ -1.31
GTF3C1-208ENST00000567843 SPINK1P00995 79 aa6.89□□□□□ -1.31
GTF3C1-208ENST00000567843 C9orf153Q5TBE3 101 aa6.89□□□□□ -1.31
GTF3C1-208ENST00000567843 FP248Q71RG6 208 aaPredicted RBP6.89□□□□□ -1.31
GTF3C1-208ENST00000567843 OR13C6PQ8NH95 151 aa6.89□□□□□ -1.31
GTF3C1-208ENST00000567843 KRTAP13-3Q3SY46 172 aa6.88□□□□□ -1.31
GTF3C1-208ENST00000567843 LINC00308Q8TCZ7 52 aa6.88□□□□□ -1.31
GTF3C1-208ENST00000567843 JOSD1Q15040 202 aaPredicted RBP6.87□□□□□ -1.31
GTF3C1-208ENST00000567843 SSBP3-AS1Q7Z2R9 100 aa6.87□□□□□ -1.31
GTF3C1-208ENST00000567843 LITAFQ99732 161 aa6.87□□□□□ -1.31
GTF3C1-208ENST00000567843 ZNF815PA8K554 130 aa6.86□□□□□ -1.31
GTF3C1-208ENST00000567843 LINC01545Q5VT33 79 aa6.86□□□□□ -1.31
GTF3C1-208ENST00000567843 LCE2AQ5TA79 106 aaPredicted RBP6.85□□□□□ -1.31
GTF3C1-208ENST00000567843 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
GTF3C1-208ENST00000567843 Q8N377 158 aa6.85□□□□□ -1.31
GTF3C1-208ENST00000567843 SPANXCQ9NY87 97 aa6.85□□□□□ -1.31
GTF3C1-208ENST00000567843 C3orf79P0CE67 100 aa6.84□□□□□ -1.31
GTF3C1-208ENST00000567843 HINT1P49773 126 aaPredicted RBP6.84□□□□□ -1.31
GTF3C1-208ENST00000567843 KRTDAPP60985 99 aa6.84□□□□□ -1.31
GTF3C1-208ENST00000567843 HRCT1Q6UXD1 115 aa6.83□□□□□ -1.32
GTF3C1-208ENST00000567843 SLC25A20O43772 301 aa6.82□□□□□ -1.32
GTF3C1-208ENST00000567843 TIMM17BO60830 172 aa6.82□□□□□ -1.32
GTF3C1-208ENST00000567843 KRTAP4-1Q9BYQ7 146 aa6.81□□□□□ -1.32
GTF3C1-208ENST00000567843 ANKRD39Q53RE8 183 aa6.8□□□□□ -1.32
GTF3C1-208ENST00000567843 ATOH7Q8N100 152 aa6.8□□□□□ -1.32
GTF3C1-208ENST00000567843 DEFB105AQ8NG35 78 aa6.8□□□□□ -1.32
GTF3C1-208ENST00000567843 SPANXDQ9BXN6 97 aa6.8□□□□□ -1.32
GTF3C1-208ENST00000567843 COX7BP24311 80 aa6.79□□□□□ -1.32
GTF3C1-208ENST00000567843 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
GTF3C1-208ENST00000567843 ASB16-AS1Q495Z4 193 aa6.79□□□□□ -1.32
GTF3C1-208ENST00000567843 C6orf99Q4VX62 202 aa6.79□□□□□ -1.32
GTF3C1-208ENST00000567843 SCGB1D4Q6XE38 83 aa6.79□□□□□ -1.32
GTF3C1-208ENST00000567843 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
GTF3C1-208ENST00000567843 CBY1Q9Y3M2 126 aa6.79□□□□□ -1.32
GTF3C1-208ENST00000567843 Q1RN00 199 aa6.78□□□□□ -1.32
GTF3C1-208ENST00000567843 DHRS4-AS1Q9P1J3 65 aa6.78□□□□□ -1.32
GTF3C1-208ENST00000567843 SPRR1BP22528 89 aa6.77□□□□□ -1.33
GTF3C1-208ENST00000567843 TAL2Q16559 108 aa6.77□□□□□ -1.33
GTF3C1-208ENST00000567843 LINC00518Q8N0U6 118 aa6.77□□□□□ -1.33
GTF3C1-208ENST00000567843 A6NDN8 102 aa6.76□□□□□ -1.33
GTF3C1-208ENST00000567843 C5orf52A6NGY3 159 aa6.76□□□□□ -1.33
GTF3C1-208ENST00000567843 ELOF1P60002 83 aaKnown RBP6.76□□□□□ -1.33
GTF3C1-208ENST00000567843 SEC61BP60468 96 aaKnown RBP6.76□□□□□ -1.33
GTF3C1-208ENST00000567843 COA6Q5JTJ3 125 aaKnown RBP6.76□□□□□ -1.33
GTF3C1-208ENST00000567843 PCP2Q8IVA1 136 aa6.76□□□□□ -1.33
GTF3C1-208ENST00000567843 LAMTOR3Q9UHA4 124 aa6.76□□□□□ -1.33
GTF3C1-208ENST00000567843 C20orf202A1L168 122 aa6.75□□□□□ -1.33
GTF3C1-208ENST00000567843 XP32Q5T750 250 aa6.75□□□□□ -1.33
GTF3C1-208ENST00000567843 MUSTN1Q8IVN3 82 aa6.75□□□□□ -1.33
GTF3C1-208ENST00000567843 A0A0G2JQZ4 141 aa6.74□□□□□ -1.33
GTF3C1-208ENST00000567843 H7C2G1 150 aa6.74□□□□□ -1.33
GTF3C1-208ENST00000567843 SLC25A34Q6PIV7 304 aa6.74□□□□□ -1.33
GTF3C1-208ENST00000567843 C9orf92A6NGG3 77 aa6.73□□□□□ -1.33
GTF3C1-208ENST00000567843 TEX49A0A1B0GTD5 131 aa6.71□□□□□ -1.34
GTF3C1-208ENST00000567843 LIMD2Q9BT23 127 aa6.71□□□□□ -1.34
GTF3C1-208ENST00000567843 IFITM1P13164 125 aa6.7□□□□□ -1.34
GTF3C1-208ENST00000567843 LINC01547P58512 204 aaPredicted RBP6.7□□□□□ -1.34
GTF3C1-208ENST00000567843 SMIM29Q86T20 159 aa6.7□□□□□ -1.34
GTF3C1-208ENST00000567843 PRO1933Q9H354 126 aa6.7□□□□□ -1.34
GTF3C1-208ENST00000567843 A0A1B0GWB2 263 aa6.69□□□□□ -1.34
GTF3C1-208ENST00000567843 TRBV7-6A0A0J9YX20 115 aa6.68□□□□□ -1.34
GTF3C1-208ENST00000567843 SMIM11BQ8TCY0 68 aa6.68□□□□□ -1.34
GTF3C1-208ENST00000567843 COPS9Q8WXC6 57 aa6.68□□□□□ -1.34
GTF3C1-208ENST00000567843 PCOTHQ58A44 107 aa6.67□□□□□ -1.34
GTF3C1-208ENST00000567843 Q6ZVH6 145 aa6.67□□□□□ -1.34
GTF3C1-208ENST00000567843 AKR1D1P51857 326 aa6.66□□□□□ -1.34
GTF3C1-208ENST00000567843 IGLV5-48A0A075B6I7 105 aa6.65□□□□□ -1.34
GTF3C1-208ENST00000567843 TRAV13-2A0A0B4J235 113 aa6.65□□□□□ -1.34
GTF3C1-208ENST00000567843 IGLV8-61A0A075B6I0 122 aa6.64□□□□□ -1.35
GTF3C1-208ENST00000567843 CD164Q04900 197 aa6.64□□□□□ -1.35
GTF3C1-208ENST00000567843 HIST3H2BBQ8N257 126 aa6.64□□□□□ -1.35
GTF3C1-208ENST00000567843 HIST1H2BLQ99880 126 aa6.64□□□□□ -1.35
GTF3C1-208ENST00000567843 S100A2P29034 98 aa6.63□□□□□ -1.35
GTF3C1-208ENST00000567843 C1orf195Q5TG92 126 aa6.63□□□□□ -1.35
GTF3C1-208ENST00000567843 A4D1N5 150 aa6.62□□□□□ -1.35
GTF3C1-208ENST00000567843 HSBP1L1C9JCN9 74 aa6.61□□□□□ -1.35
GTF3C1-208ENST00000567843 SNRPEP62304 92 aaKnown RBP6.61□□□□□ -1.35
GTF3C1-208ENST00000567843 LCE2CQ5TA81 110 aa6.61□□□□□ -1.35
GTF3C1-208ENST00000567843 NHP2Q9NX24 153 aaKnown RBP6.61□□□□□ -1.35
GTF3C1-208ENST00000567843 VAMP3Q15836 100 aa6.6□□□□□ -1.35
GTF3C1-208ENST00000567843 C12orf57Q99622 126 aa6.6□□□□□ -1.35
GTF3C1-208ENST00000567843 LINC00575Q6W349 94 aa6.59□□□□□ -1.35
GTF3C1-208ENST00000567843 Q6ZQY7 126 aa6.59□□□□□ -1.35
GTF3C1-208ENST00000567843 KRTAP9-6A0A140TA67 174 aa6.58□□□□□ -1.36
GTF3C1-208ENST00000567843 KRTAP19-2Q3LHN2 52 aa6.58□□□□□ -1.36
GTF3C1-208ENST00000567843 Q5XG85 94 aa6.58□□□□□ -1.36
GTF3C1-208ENST00000567843 hADV29S1A0JD25 119 aa6.57□□□□□ -1.36
GTF3C1-208ENST00000567843 F8WEM9 126 aa6.57□□□□□ -1.36
GTF3C1-208ENST00000567843 SCGB1D1O95968 90 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms