RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ARL17AQ8IVW1 177 aa2.79□□□□□ -1.96
CLK3-219ENST00000567805 LINC00337Q8N6G1 96 aa2.79□□□□□ -1.96
CLK3-219ENST00000567805 LINC00304Q8N9R0 145 aa2.79□□□□□ -1.96
CLK3-219ENST00000567805 HIGD2AQ9BW72 106 aa2.79□□□□□ -1.96
CLK3-219ENST00000567805 KCNQ1DNQ9H478 68 aa2.79□□□□□ -1.96
CLK3-219ENST00000567805 ZNF706Q9Y5V0 76 aaPredicted RBP2.79□□□□□ -1.96
CLK3-219ENST00000567805 MUC2Q02817 5179 aa2.79□□□□□ -1.96
CLK3-219ENST00000567805 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
CLK3-219ENST00000567805 TRBV10-3A0A0K0K1G6 114 aa2.78□□□□□ -1.96
CLK3-219ENST00000567805 TRBV10-2A0A0K0K1G8 114 aa2.78□□□□□ -1.96
CLK3-219ENST00000567805 ETDCA0A1B0GVM5 59 aa2.78□□□□□ -1.96
CLK3-219ENST00000567805 KRTAP4-16G5E9R7 235 aaPredicted RBP2.78□□□□□ -1.96
CLK3-219ENST00000567805 LGALS3P17931 250 aaKnown RBP2.78□□□□□ -1.96
CLK3-219ENST00000567805 LINC00518Q8N0U6 118 aa2.78□□□□□ -1.96
CLK3-219ENST00000567805 DAND5Q8N907 189 aa2.78□□□□□ -1.96
CLK3-219ENST00000567805 SPRR4Q96PI1 79 aa2.78□□□□□ -1.96
CLK3-219ENST00000567805 PMCHL2Q9BQD1 86 aa2.78□□□□□ -1.96
CLK3-219ENST00000567805 MIEN1Q9BRT3 115 aa2.78□□□□□ -1.96
CLK3-219ENST00000567805 E9PLD3 99 aa2.77□□□□□ -1.97
CLK3-219ENST00000567805 NDUFC2O95298 119 aa2.77□□□□□ -1.97
CLK3-219ENST00000567805 DDTP30046 118 aa2.77□□□□□ -1.97
CLK3-219ENST00000567805 SPAG11AQ6PDA7 123 aa2.77□□□□□ -1.97
CLK3-219ENST00000567805 C3orf22Q8N5N4 141 aa2.77□□□□□ -1.97
CLK3-219ENST00000567805 SPANXB1Q9NS25 103 aaPredicted RBP2.77□□□□□ -1.97
CLK3-219ENST00000567805 A0A0J9YXY3 114 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 SYS1-DBNDD2H3BUS1 97 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 HIST1H2BKO60814 126 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 HIST1H2BJP06899 126 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 HIST1H2BOP23527 126 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 HIST1H2BBP33778 126 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 HIST1H2BDP58876 126 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 HIST1H2BCP62807 126 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 HIST2H2BEQ16778 126 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 LINC00483Q53H64 154 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.76□□□□□ -1.97
CLK3-219ENST00000567805 S100A7L2Q5SY68 101 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 SMCR5Q8TEV8 140 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 HIST1H2BHQ93079 126 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 HIST1H2BNQ99877 126 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 HIST1H2BMQ99879 126 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 RETNLBQ9BQ08 111 aa2.76□□□□□ -1.97
CLK3-219ENST00000567805 TRAV23DV6A0A075B6W5 121 aa2.75□□□□□ -1.97
CLK3-219ENST00000567805 IGLV6-57P01721 117 aa2.75□□□□□ -1.97
CLK3-219ENST00000567805 TPRXLQ17RH7 258 aa2.75□□□□□ -1.97
CLK3-219ENST00000567805 ADAMTSL4-AS1Q5T5F5 129 aa2.75□□□□□ -1.97
CLK3-219ENST00000567805 LINC01545Q5VT33 79 aa2.75□□□□□ -1.97
CLK3-219ENST00000567805 PET117Q6UWS5 81 aa2.75□□□□□ -1.97
CLK3-219ENST00000567805 Q6ZRX8 168 aa2.75□□□□□ -1.97
CLK3-219ENST00000567805 CBY1Q9Y3M2 126 aa2.75□□□□□ -1.97
CLK3-219ENST00000567805 MUC17Q685J3 4493 aa2.75□□□□□ -1.97
CLK3-219ENST00000567805 IGLV7-46A0A075B6I9 117 aa2.74□□□□□ -1.97
CLK3-219ENST00000567805 TIMM17BO60830 172 aa2.74□□□□□ -1.97
CLK3-219ENST00000567805 ERC2-IT1O76042 136 aa2.74□□□□□ -1.97
CLK3-219ENST00000567805 SPINK1P00995 79 aa2.74□□□□□ -1.97
CLK3-219ENST00000567805 NPC2P61916 151 aa2.74□□□□□ -1.97
CLK3-219ENST00000567805 JOSD1Q15040 202 aaPredicted RBP2.74□□□□□ -1.97
CLK3-219ENST00000567805 COA6Q5JTJ3 125 aaKnown RBP2.74□□□□□ -1.97
CLK3-219ENST00000567805 GAGE2AQ6NT46 116 aa2.74□□□□□ -1.97
CLK3-219ENST00000567805 SOSTDC1Q6X4U4 206 aa2.74□□□□□ -1.97
CLK3-219ENST00000567805 Q8NBF4 154 aa2.74□□□□□ -1.97
CLK3-219ENST00000567805 Q9BRP9 147 aa2.74□□□□□ -1.97
CLK3-219ENST00000567805 PPDPFQ9H3Y8 114 aa2.74□□□□□ -1.97
CLK3-219ENST00000567805 SPANXCQ9NY87 97 aa2.74□□□□□ -1.97
CLK3-219ENST00000567805 A0A0U1RQV1 116 aa2.73□□□□□ -1.97
CLK3-219ENST00000567805 C5orf52A6NGY3 159 aa2.73□□□□□ -1.97
CLK3-219ENST00000567805 ZNF815PA8K554 130 aa2.73□□□□□ -1.97
CLK3-219ENST00000567805 ZNF73O43830 326 aaPredicted RBP2.73□□□□□ -1.97
CLK3-219ENST00000567805 C3orf79P0CE67 100 aa2.73□□□□□ -1.97
CLK3-219ENST00000567805 HINT1P49773 126 aaPredicted RBP2.73□□□□□ -1.97
CLK3-219ENST00000567805 RPS29P62273 56 aaKnown RBP2.73□□□□□ -1.97
CLK3-219ENST00000567805 FP248Q71RG6 208 aaPredicted RBP2.73□□□□□ -1.97
CLK3-219ENST00000567805 SSBP3-AS1Q7Z2R9 100 aa2.73□□□□□ -1.97
CLK3-219ENST00000567805 LINC00308Q8TCZ7 52 aa2.73□□□□□ -1.97
CLK3-219ENST00000567805 LITAFQ99732 161 aa2.73□□□□□ -1.97
CLK3-219ENST00000567805 IGLV9-49A0A0B4J1Y8 123 aa2.72□□□□□ -1.97
CLK3-219ENST00000567805 C20orf202A1L168 122 aa2.72□□□□□ -1.97
CLK3-219ENST00000567805 AKR1D1P51857 326 aa2.72□□□□□ -1.97
CLK3-219ENST00000567805 KRTDAPP60985 99 aa2.72□□□□□ -1.97
CLK3-219ENST00000567805 MOBPQ13875 183 aa2.72□□□□□ -1.97
CLK3-219ENST00000567805 OR13C6PQ8NH95 151 aa2.72□□□□□ -1.97
CLK3-219ENST00000567805 SPANXDQ9BXN6 97 aa2.72□□□□□ -1.97
CLK3-219ENST00000567805 S100A6P06703 90 aa2.71□□□□□ -1.98
CLK3-219ENST00000567805 SCGB1D4Q6XE38 83 aa2.71□□□□□ -1.98
CLK3-219ENST00000567805 Q8N377 158 aa2.71□□□□□ -1.98
CLK3-219ENST00000567805 COPS9Q8WXC6 57 aa2.71□□□□□ -1.98
CLK3-219ENST00000567805 KRTAP3-1Q9BYR8 98 aa2.71□□□□□ -1.98
CLK3-219ENST00000567805 TTTY13Q9BZ97 58 aa2.71□□□□□ -1.98
CLK3-219ENST00000567805 DHRS4-AS1Q9P1J3 65 aa2.71□□□□□ -1.98
CLK3-219ENST00000567805 SLC25A20O43772 301 aa2.7□□□□□ -1.98
CLK3-219ENST00000567805 SMIM6P0DI80 62 aa2.7□□□□□ -1.98
CLK3-219ENST00000567805 IFITM1P13164 125 aa2.7□□□□□ -1.98
CLK3-219ENST00000567805 KRTAP13-3Q3SY46 172 aa2.7□□□□□ -1.98
CLK3-219ENST00000567805 C9orf153Q5TBE3 101 aa2.7□□□□□ -1.98
CLK3-219ENST00000567805 SLC25A34Q6PIV7 304 aa2.7□□□□□ -1.98
CLK3-219ENST00000567805 Q6ZVH6 145 aa2.7□□□□□ -1.98
CLK3-219ENST00000567805 ST20-AS1Q8NBB2 130 aa2.7□□□□□ -1.98
CLK3-219ENST00000567805 C12orf57Q99622 126 aa2.7□□□□□ -1.98
CLK3-219ENST00000567805 TRBV7-6A0A0J9YX20 115 aa2.69□□□□□ -1.98
CLK3-219ENST00000567805 SPRR1BP22528 89 aa2.69□□□□□ -1.98
CLK3-219ENST00000567805 COX7BP24311 80 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms