RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 KCNQ1DNQ9H478 68 aa0.92□□□□□ -2.26
SHCBP1-206ENST00000567698 ARFGEF2Q9Y6D5 1785 aa0.92□□□□□ -2.26
SHCBP1-206ENST00000567698 KNTC1P50748 2209 aa0.92□□□□□ -2.26
SHCBP1-206ENST00000567698 DDX60LQ5H9U9 1706 aaKnown RBP0.92□□□□□ -2.26
SHCBP1-206ENST00000567698 ANKRD36CQ5JPF3 1778 aa0.91□□□□□ -2.26
SHCBP1-206ENST00000567698 S100A3P33764 101 aa0.91□□□□□ -2.26
SHCBP1-206ENST00000567698 FXYD6P3P58550 94 aa0.91□□□□□ -2.26
SHCBP1-206ENST00000567698 SPINK9Q5DT21 86 aa0.91□□□□□ -2.26
SHCBP1-206ENST00000567698 ENHOQ6UWT2 76 aa0.91□□□□□ -2.26
SHCBP1-206ENST00000567698 GAFA1Q96PS6 74 aa0.91□□□□□ -2.26
SHCBP1-206ENST00000567698 CNFNQ9BYD5 112 aa0.91□□□□□ -2.26
SHCBP1-206ENST00000567698 PARP4Q9UKK3 1724 aaKnown RBP0.91□□□□□ -2.26
SHCBP1-206ENST00000567698 TOGARAM1Q9Y4F4 1720 aa0.91□□□□□ -2.26
SHCBP1-206ENST00000567698 DNAJC13O75165 2243 aa0.91□□□□□ -2.26
SHCBP1-206ENST00000567698 ANKRD36A6QL64 1941 aa0.9□□□□□ -2.27
SHCBP1-206ENST00000567698 DEFB131BA0A096LNP1 70 aa0.9□□□□□ -2.27
SHCBP1-206ENST00000567698 ETDCA0A1B0GVM5 59 aa0.9□□□□□ -2.27
SHCBP1-206ENST00000567698 NDUFA4O00483 81 aa0.9□□□□□ -2.27
SHCBP1-206ENST00000567698 COX6B2Q6YFQ2 88 aa0.9□□□□□ -2.27
SHCBP1-206ENST00000567698 SSBP3-AS1Q7Z2R9 100 aa0.9□□□□□ -2.27
SHCBP1-206ENST00000567698 SMIM2Q9BVW6 85 aa0.9□□□□□ -2.27
SHCBP1-206ENST00000567698 ZNF831Q5JPB2 1677 aa0.9□□□□□ -2.27
SHCBP1-206ENST00000567698 COL14A1Q05707 1796 aaKnown RBP0.89□□□□□ -2.27
SHCBP1-206ENST00000567698 I3L3M4 83 aa0.89□□□□□ -2.27
SHCBP1-206ENST00000567698 M0R1W7 72 aa0.89□□□□□ -2.27
SHCBP1-206ENST00000567698 COX7BP24311 80 aa0.89□□□□□ -2.27
SHCBP1-206ENST00000567698 DEFB112Q30KQ8 113 aa0.89□□□□□ -2.27
SHCBP1-206ENST00000567698 UBE2DNLQ8IWF7 75 aa0.89□□□□□ -2.27
SHCBP1-206ENST00000567698 A0A0G2JMZ2 1700 aa0.89□□□□□ -2.27
SHCBP1-206ENST00000567698 DDX60Q8IY21 1712 aaKnown RBP0.89□□□□□ -2.27
SHCBP1-206ENST00000567698 A0A1B0GU69 56 aa0.88□□□□□ -2.27
SHCBP1-206ENST00000567698 LRRC37AA6NMS7 1700 aa0.88□□□□□ -2.27
SHCBP1-206ENST00000567698 DOT1LQ8TEK3 1739 aa0.87□□□□□ -2.27
SHCBP1-206ENST00000567698 TP53AIP1Q9HCN2 124 aa0.87□□□□□ -2.27
SHCBP1-206ENST00000567698 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
SHCBP1-206ENST00000567698 ASXL3Q9C0F0 2248 aa0.87□□□□□ -2.27
SHCBP1-206ENST00000567698 C4BP0C0L5 1744 aa0.86□□□□□ -2.27
SHCBP1-206ENST00000567698 SPTY2D1-AS1A0A0U1RR47 76 aa0.86□□□□□ -2.27
SHCBP1-206ENST00000567698 LINC00959A0A1B0GUT2 108 aa0.86□□□□□ -2.27
SHCBP1-206ENST00000567698 LYNX1G3V0Z9 82 aa0.86□□□□□ -2.27
SHCBP1-206ENST00000567698 CCL22O00626 93 aa0.86□□□□□ -2.27
SHCBP1-206ENST00000567698 NDUFA1O15239 70 aa0.86□□□□□ -2.27
SHCBP1-206ENST00000567698 NDUFA3O95167 84 aa0.86□□□□□ -2.27
SHCBP1-206ENST00000567698 USMG5Q96IX5 58 aa0.86□□□□□ -2.27
SHCBP1-206ENST00000567698 C4AP0C0L4 1744 aa0.86□□□□□ -2.27
SHCBP1-206ENST00000567698 TIAM2Q8IVF5 1701 aa0.86□□□□□ -2.27
SHCBP1-206ENST00000567698 Q8IZM0 81 aa0.85□□□□□ -2.27
SHCBP1-206ENST00000567698 LINC00308Q8TCZ7 52 aa0.85□□□□□ -2.27
SHCBP1-206ENST00000567698 TSC2P49815 1807 aa0.85□□□□□ -2.27
SHCBP1-206ENST00000567698 BCORQ6W2J9 1755 aa0.84□□□□□ -2.27
SHCBP1-206ENST00000567698 I3L2K1 104 aa0.84□□□□□ -2.27
SHCBP1-206ENST00000567698 SPINK4O60575 86 aa0.84□□□□□ -2.27
SHCBP1-206ENST00000567698 CDKN2A-AS1Q9UH64 79 aa0.84□□□□□ -2.27
SHCBP1-206ENST00000567698 NRAPQ86VF7 1730 aa0.84□□□□□ -2.28
SHCBP1-206ENST00000567698 MEGF8Q7Z7M0 2845 aa0.83□□□□□ -2.28
SHCBP1-206ENST00000567698 TENM3Q9P273 2699 aa0.83□□□□□ -2.28
SHCBP1-206ENST00000567698 JMJD1CQ15652 2540 aa0.83□□□□□ -2.28
SHCBP1-206ENST00000567698 K7EQZ3 153 aa0.83□□□□□ -2.28
SHCBP1-206ENST00000567698 LINC00158P58513 81 aa0.83□□□□□ -2.28
SHCBP1-206ENST00000567698 ARHGAP5-AS1Q96IT6 56 aa0.83□□□□□ -2.28
SHCBP1-206ENST00000567698 TIMM8BQ9Y5J9 83 aaPredicted RBP0.83□□□□□ -2.28
SHCBP1-206ENST00000567698 UBR3Q6ZT12 1888 aa0.83□□□□□ -2.28
SHCBP1-206ENST00000567698 TNRC6CQ9HCJ0 1690 aaKnown RBP0.82□□□□□ -2.28
SHCBP1-206ENST00000567698 PIGYQ3MUY2 71 aa0.82□□□□□ -2.28
SHCBP1-206ENST00000567698 LINC01590Q5TEZ4 76 aa0.82□□□□□ -2.28
SHCBP1-206ENST00000567698 CRIPTQ9P021 101 aa0.82□□□□□ -2.28
SHCBP1-206ENST00000567698 IAPPP10997 89 aa0.81□□□□□ -2.28
SHCBP1-206ENST00000567698 DEFB131AP59861 70 aa0.81□□□□□ -2.28
SHCBP1-206ENST00000567698 TFF3Q07654 80 aa0.81□□□□□ -2.28
SHCBP1-206ENST00000567698 NAV3Q8IVL0 2385 aa0.81□□□□□ -2.28
SHCBP1-206ENST00000567698 IGLV5-48A0A075B6I7 105 aa0.8□□□□□ -2.28
SHCBP1-206ENST00000567698 POLR2KP53803 58 aaKnown RBP0.8□□□□□ -2.28
SHCBP1-206ENST00000567698 PRCDQ00LT1 54 aa0.8□□□□□ -2.28
SHCBP1-206ENST00000567698 MINOS1Q5TGZ0 78 aa0.8□□□□□ -2.28
SHCBP1-206ENST00000567698 DEFB123Q8N688 67 aa0.8□□□□□ -2.28
SHCBP1-206ENST00000567698 C6orf48Q9UBA6 75 aa0.8□□□□□ -2.28
SHCBP1-206ENST00000567698 H3BUA1 57 aa0.79□□□□□ -2.28
SHCBP1-206ENST00000567698 DEFB109BQ30KR1 87 aa0.79□□□□□ -2.28
SHCBP1-206ENST00000567698 MRPL34Q9BQ48 92 aaKnown RBP0.79□□□□□ -2.28
SHCBP1-206ENST00000567698 PRO3102Q9H379 93 aa0.79□□□□□ -2.28
SHCBP1-206ENST00000567698 ZNF462Q96JM2 2506 aa0.77□□□□□ -2.29
SHCBP1-206ENST00000567698 LOC730098B7Z3J9 87 aa0.77□□□□□ -2.29
SHCBP1-206ENST00000567698 CRIP1P50238 77 aa0.77□□□□□ -2.29
SHCBP1-206ENST00000567698 COX6A2Q02221 97 aa0.76□□□□□ -2.29
SHCBP1-206ENST00000567698 Q5VSD8 79 aa0.76□□□□□ -2.29
SHCBP1-206ENST00000567698 PRO0255Q9UI72 69 aa0.76□□□□□ -2.29
SHCBP1-206ENST00000567698 FAM208BQ5VWN6 2430 aa0.75□□□□□ -2.29
SHCBP1-206ENST00000567698 FRAS1Q86XX4 4008 aa0.75□□□□□ -2.29
SHCBP1-206ENST00000567698 TMEM167AQ8TBQ9 72 aa0.75□□□□□ -2.29
SHCBP1-206ENST00000567698 ANKRD17O75179 2603 aaKnown RBP0.75□□□□□ -2.29
SHCBP1-206ENST00000567698 M0QY20 66 aa0.74□□□□□ -2.29
SHCBP1-206ENST00000567698 RPS27LQ71UM5 84 aaKnown RBP0.74□□□□□ -2.29
SHCBP1-206ENST00000567698 NOP10Q9NPE3 64 aaKnown RBP0.74□□□□□ -2.29
SHCBP1-206ENST00000567698 H0YAA0 97 aa0.73□□□□□ -2.29
SHCBP1-206ENST00000567698 K7EIM0 57 aa0.73□□□□□ -2.29
SHCBP1-206ENST00000567698 RPL39P62891 51 aaKnown RBP0.73□□□□□ -2.29
SHCBP1-206ENST00000567698 KRTAP19-3Q7Z4W3 81 aa0.73□□□□□ -2.29
SHCBP1-206ENST00000567698 TTTY10Q9BZA0 68 aa0.73□□□□□ -2.29
SHCBP1-206ENST00000567698 MMP24-AS1A0A0U1RRL7 71 aa0.72□□□□□ -2.29
SHCBP1-206ENST00000567698 WT1-ASQ06250 92 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms