RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 PRO1933Q9H354 126 aa8.64□□□□□ -1.03
CDH3-205ENST00000566808 LINC00846Q9NV44 126 aa8.64□□□□□ -1.03
CDH3-205ENST00000566808 MYMXA0A1B0GTQ4 84 aa8.63□□□□□ -1.03
CDH3-205ENST00000566808 SMIM29Q86T20 159 aa8.63□□□□□ -1.03
CDH3-205ENST00000566808 MIEN1Q9BRT3 115 aa8.63□□□□□ -1.03
CDH3-205ENST00000566808 NDUFC2O95298 119 aa8.62□□□□□ -1.03
CDH3-205ENST00000566808 C20orf202A1L168 122 aa8.61□□□□□ -1.03
CDH3-205ENST00000566808 HINT1P49773 126 aaPredicted RBP8.61□□□□□ -1.03
CDH3-205ENST00000566808 PMCHL1Q16048 86 aa8.6□□□□□ -1.03
CDH3-205ENST00000566808 ATP11AUNQ6ZP68 121 aa8.6□□□□□ -1.03
CDH3-205ENST00000566808 COMMD7Q86VX2 200 aa8.6□□□□□ -1.03
CDH3-205ENST00000566808 MT1FP04733 61 aa8.59□□□□□ -1.03
CDH3-205ENST00000566808 URB1-AS1Q96HZ7 61 aa8.59□□□□□ -1.03
CDH3-205ENST00000566808 KRTAP9-3Q9BYQ3 159 aa8.59□□□□□ -1.03
CDH3-205ENST00000566808 DHRS4-AS1Q9P1J3 65 aa8.59□□□□□ -1.03
CDH3-205ENST00000566808 CBY1Q9Y3M2 126 aa8.59□□□□□ -1.03
CDH3-205ENST00000566808 Q1RN00 199 aa8.58□□□□□ -1.04
CDH3-205ENST00000566808 KRTAP6-3Q3LI67 103 aa8.58□□□□□ -1.04
CDH3-205ENST00000566808 hCG_2014768A0A024R1R8 64 aa8.57□□□□□ -1.04
CDH3-205ENST00000566808 LINC00614P0C842 121 aa8.57□□□□□ -1.04
CDH3-205ENST00000566808 FABP9Q0Z7S8 132 aa8.57□□□□□ -1.04
CDH3-205ENST00000566808 COX19Q49B96 90 aa8.57□□□□□ -1.04
CDH3-205ENST00000566808 TRAV12-1A0A0B4J245 112 aa8.56□□□□□ -1.04
CDH3-205ENST00000566808 AKR1D1P51857 326 aa8.56□□□□□ -1.04
CDH3-205ENST00000566808 Q75L30 129 aa8.56□□□□□ -1.04
CDH3-205ENST00000566808 SEC11CQ9BY50 192 aa8.55□□□□□ -1.04
CDH3-205ENST00000566808 S100PP25815 95 aa8.54□□□□□ -1.04
CDH3-205ENST00000566808 IFITM2Q01629 132 aa8.54□□□□□ -1.04
CDH3-205ENST00000566808 KRTAP19-6Q3LI70 58 aa8.54□□□□□ -1.04
CDH3-205ENST00000566808 C18orf32Q8TCD1 76 aa8.54□□□□□ -1.04
CDH3-205ENST00000566808 TCL1BO95988 128 aa8.52□□□□□ -1.05
CDH3-205ENST00000566808 TSPEAR-AS2P59090 65 aa8.52□□□□□ -1.05
CDH3-205ENST00000566808 KRTAP10-10P60014 251 aa8.52□□□□□ -1.05
CDH3-205ENST00000566808 C10orf91Q5T1B1 145 aa8.52□□□□□ -1.05
CDH3-205ENST00000566808 TAL2Q16559 108 aa8.51□□□□□ -1.05
CDH3-205ENST00000566808 RPS10P5Q9NQ39 176 aa8.51□□□□□ -1.05
CDH3-205ENST00000566808 TEX49A0A1B0GTD5 131 aa8.5□□□□□ -1.05
CDH3-205ENST00000566808 TRBV20-1A0A075B6N2 111 aa8.49□□□□□ -1.05
CDH3-205ENST00000566808 DEFB105AQ8NG35 78 aa8.49□□□□□ -1.05
CDH3-205ENST00000566808 IFI27L1Q96BM0 104 aa8.49□□□□□ -1.05
CDH3-205ENST00000566808 SOSTDC1Q6X4U4 206 aa8.48□□□□□ -1.05
CDH3-205ENST00000566808 OBSCN-AS1Q96MR7 158 aa8.48□□□□□ -1.05
CDH3-205ENST00000566808 A0A0G2JQZ4 141 aa8.47□□□□□ -1.05
CDH3-205ENST00000566808 ELOF1P60002 83 aaKnown RBP8.47□□□□□ -1.05
CDH3-205ENST00000566808 NEBP20929 6669 aa8.47□□□□□ -1.05
CDH3-205ENST00000566808 LEPROTO15243 131 aa8.46□□□□□ -1.06
CDH3-205ENST00000566808 PCP2Q8IVA1 136 aa8.46□□□□□ -1.06
CDH3-205ENST00000566808 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
CDH3-205ENST00000566808 NMUP48645 174 aa8.45□□□□□ -1.06
CDH3-205ENST00000566808 RHEBQ15382 184 aa8.45□□□□□ -1.06
CDH3-205ENST00000566808 J3QQQ9 107 aa8.44□□□□□ -1.06
CDH3-205ENST00000566808 COX7BP24311 80 aa8.44□□□□□ -1.06
CDH3-205ENST00000566808 NPC2P61916 151 aa8.44□□□□□ -1.06
CDH3-205ENST00000566808 OR13C6PQ8NH95 151 aa8.42□□□□□ -1.06
CDH3-205ENST00000566808 IGLV5-48A0A075B6I7 105 aa8.4□□□□□ -1.06
CDH3-205ENST00000566808 C6orf99Q4VX62 202 aa8.4□□□□□ -1.06
CDH3-205ENST00000566808 SPANXDQ9BXN6 97 aa8.4□□□□□ -1.06
CDH3-205ENST00000566808 SPANXCQ9NY87 97 aa8.4□□□□□ -1.06
CDH3-205ENST00000566808 LGALS3P17931 250 aaKnown RBP8.39□□□□□ -1.07
CDH3-205ENST00000566808 C20orf166-AS1Q96NR2 134 aa8.39□□□□□ -1.07
CDH3-205ENST00000566808 TRAPPC1Q9Y5R8 145 aa8.39□□□□□ -1.07
CDH3-205ENST00000566808 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
CDH3-205ENST00000566808 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
CDH3-205ENST00000566808 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
CDH3-205ENST00000566808 HERVK_113P61574 105 aa8.37□□□□□ -1.07
CDH3-205ENST00000566808 PLNP26678 52 aa8.36□□□□□ -1.07
CDH3-205ENST00000566808 CHCHD1Q96BP2 118 aaKnown RBP8.36□□□□□ -1.07
CDH3-205ENST00000566808 A0A0J9YXY3 114 aa8.35□□□□□ -1.07
CDH3-205ENST00000566808 H0Y8G0 127 aa8.34□□□□□ -1.07
CDH3-205ENST00000566808 Q96NJ1 140 aa8.34□□□□□ -1.07
CDH3-205ENST00000566808 TRBV7-6A0A0J9YX20 115 aa8.33□□□□□ -1.08
CDH3-205ENST00000566808 TMEM218A2RU14 115 aa8.32□□□□□ -1.08
CDH3-205ENST00000566808 IGFL1Q6UW32 110 aa8.32□□□□□ -1.08
CDH3-205ENST00000566808 LINC00308Q8TCZ7 52 aa8.32□□□□□ -1.08
CDH3-205ENST00000566808 A0A1B0GWB2 263 aa8.31□□□□□ -1.08
CDH3-205ENST00000566808 A8MUU9 505 aa8.3□□□□□ -1.08
CDH3-205ENST00000566808 F8WEM9 126 aa8.3□□□□□ -1.08
CDH3-205ENST00000566808 UQCC3Q6UW78 93 aa8.3□□□□□ -1.08
CDH3-205ENST00000566808 TRBV7-7A0A0K0K1E9 115 aa8.29□□□□□ -1.08
CDH3-205ENST00000566808 KRTAP20-1Q3LI63 56 aa8.29□□□□□ -1.08
CDH3-205ENST00000566808 DPM2O94777 84 aa8.28□□□□□ -1.08
CDH3-205ENST00000566808 LINC00518Q8N0U6 118 aa8.27□□□□□ -1.09
CDH3-205ENST00000566808 LITAFQ99732 161 aa8.27□□□□□ -1.09
CDH3-205ENST00000566808 HSBP1O75506 76 aa8.26□□□□□ -1.09
CDH3-205ENST00000566808 CLEC2BQ92478 149 aa8.26□□□□□ -1.09
CDH3-205ENST00000566808 RBM12B-AS1Q9P1G2 102 aa8.26□□□□□ -1.09
CDH3-205ENST00000566808 MUC12Q9UKN1 5478 aa8.26□□□□□ -1.09
CDH3-205ENST00000566808 IGKCP01834 107 aa8.24□□□□□ -1.09
CDH3-205ENST00000566808 Q6JHZ5 121 aa8.24□□□□□ -1.09
CDH3-205ENST00000566808 MPLKIPQ8TAP9 179 aa8.24□□□□□ -1.09
CDH3-205ENST00000566808 TIMM17BO60830 172 aa8.23□□□□□ -1.09
CDH3-205ENST00000566808 CLLU1Q5K131 121 aa8.23□□□□□ -1.09
CDH3-205ENST00000566808 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
CDH3-205ENST00000566808 A4D1N5 150 aa8.22□□□□□ -1.09
CDH3-205ENST00000566808 PMCHL2Q9BQD1 86 aa8.22□□□□□ -1.09
CDH3-205ENST00000566808 E9PLD3 99 aa8.21□□□□□ -1.1
CDH3-205ENST00000566808 LST1O00453 97 aa8.21□□□□□ -1.1
CDH3-205ENST00000566808 LEPROTL1O95214 131 aa8.21□□□□□ -1.1
CDH3-205ENST00000566808 HRES1P13985 223 aa8.19□□□□□ -1.1
CDH3-205ENST00000566808 ZNF815PA8K554 130 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms