RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 NAT8BQ9UHF3 227 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 MUC12Q9UKN1 5478 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 LINC00862A6NCI5 91 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 C11orf86A6NJI1 115 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 M0QXV9 152 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 NDUFA1O15239 70 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 APOC3P02656 99 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 MT-ND4LP03901 98 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 TRGC2P03986 189 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 LINC00614P0C842 121 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 SMIM13P0DJ93 91 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 FABP4P15090 132 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 ZNF25P17030 456 aaPredicted RBP0.57□□□□□ -2.32
SMG1-212ENST00000566328 LINC00158P58513 81 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 TSPEAR-AS2P59090 65 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 CKS1BP61024 79 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 MRPS36P82909 103 aaKnown RBP0.57□□□□□ -2.32
SMG1-212ENST00000566328 COA6Q5JTJ3 125 aaKnown RBP0.57□□□□□ -2.32
SMG1-212ENST00000566328 TMEM170BQ5T4T1 132 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 HRCT1Q6UXD1 115 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 Q6ZN92 141 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 TEX43Q6ZNM6 134 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 COMMD7Q86VX2 200 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 BAGE3Q86Y29 109 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 CBLN2Q8IUK8 224 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 ORMDL3Q8N138 153 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 ST20-AS1Q8NBB2 130 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 SMCR5Q8TEV8 140 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 COX7B2Q8TF08 81 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 TOMM6Q96B49 74 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 PLEKHB2Q96CS7 222 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 TMEM141Q96I45 108 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 PACRGQ96M98 296 aaPredicted RBP0.57□□□□□ -2.32
SMG1-212ENST00000566328 TTTY13Q9BZ97 58 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 MAP1LC3AQ9H492 121 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 SMDT1Q9H4I9 107 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 GEMIN7Q9H840 131 aaKnown RBP0.57□□□□□ -2.32
SMG1-212ENST00000566328 SND1-IT1Q9HBX3 110 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 BIN3Q9NQY0 253 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 MRPL35Q9NZE8 188 aaKnown RBP0.57□□□□□ -2.32
SMG1-212ENST00000566328 CSDC2Q9Y534 153 aaKnown RBP0.57□□□□□ -2.32
SMG1-212ENST00000566328 TRAPPC1Q9Y5R8 145 aa0.57□□□□□ -2.32
SMG1-212ENST00000566328 KMT2DO14686 5537 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 TRBV10-3A0A0K0K1G6 114 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 TINCRA0A1B0GVN0 87 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 C9orf92A6NGG3 77 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 NDUFC2-KCTD14E9PQ53 114 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 F8VRH5 84 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 H7C2G1 150 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 M0R378 163 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 NCR3O14931 201 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 PPP1R2P9O14990 202 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 ATP5LO75964 103 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 IGLV6-57P01721 117 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 PPBPP02775 128 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 ZNF22P17026 224 aaPredicted RBP0.56□□□□□ -2.32
SMG1-212ENST00000566328 PKIAP61925 76 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 PMVKQ15126 192 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 PDZD11Q5EBL8 140 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 CLLU1Q5K131 121 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 SOSTDC1Q6X4U4 206 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 FA2HQ7L5A8 372 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 FAM19A1Q7Z5A9 133 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 MRPL55Q7Z7F7 128 aaKnown RBP0.56□□□□□ -2.32
SMG1-212ENST00000566328 BOD1L2Q8IYS8 172 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 DEFB105AQ8NG35 78 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 OR10D4PQ8NGN7 298 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 C18orf32Q8TCD1 76 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 DIRC1Q969H9 104 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 SMIM12Q96EX1 92 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 YPEL4Q96NS1 127 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 TIMM21Q9BVV7 248 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 HIGD2AQ9BW72 106 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 GNB1LQ9BYB4 327 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 SMCO4Q9NRQ5 59 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 SPANXA1Q9NS26 97 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 LINC00474Q9P2X8 69 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 TP73-AS1Q9UF72 201 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 CYSLTR1Q9Y271 337 aa0.56□□□□□ -2.32
SMG1-212ENST00000566328 IGKV2D-26A0A0A0MRZ7 120 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 TRBV30A0A0K0K1B3 111 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 A0A1B0GW15 77 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 TMEM223A0PJW6 202 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 LINC01546A6NGU7 62 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 BCE1O60756 84 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 PPP1R17O96001 155 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 S100A8P05109 93 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 IGLC3P0DOY3 106 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 CRYGAP11844 174 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 S100PP25815 95 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 HERVK_113P63121 156 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 ORMDL2Q53FV1 153 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 PCOTHQ58A44 107 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 MEIG1Q5JSS6 88 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 C10orf91Q5T1B1 145 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 ATP5L2Q7Z4Y8 100 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 FAM19A3Q7Z5A8 133 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 Q8IZM0 81 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 ATOH7Q8N100 152 aa0.55□□□□□ -2.32
SMG1-212ENST00000566328 IFI27L1Q96BM0 104 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms